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KJC3_004783-T1, KJC3_004783-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004783-T1
Unique NameKJC3_004783-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:698896..701642+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004783-T1 ID=KJC3_004783-T1|Name=KJC3_004783-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2747bp|location=Sequence derived from alignment at ch4:698896..701642+ (Aspergillus niger KJC3)
TACAGCTCGAATCCGAGATCTGGCTCAAGCCAACCTAACAACAACGGGTG
TGTCCTAGTTATCAACCATCATAAAGTTGGCACTGGACTAAGATCGGTCT
ACTCTGCGAACTATTGTTTTGATACGCTGAACCTCTTTTAGTGGAATACT
GCGGACTAATAAGCTTAACAAGCACGCAATCTAACTAATCGGCAAGTCAG
CGTCCGTCACGGAGCTTCTGATAAAGATTGATCCCCGCCAAGACGCCGCC
TCTTCTTCGTTCGGCACTAGAATTCCACCAACCGACAATCTATGGATGCT
TCAGACGCAGATATTCATCTCCGGTTCGGAGAGGGGCTCTGGATCATGAC
AAGCATCTGGTGACGCAGCTGGAGGAGTTGCCAAGCAAGAATTGCGTTGC
TTCTTAGGGGGAAAGAAGGAAGGGATCGGCAGAGAGAGCGAAAAGGTCAC
GGAGGGAGACGGCGCTCTCGATCAGACAGAAAAGTCCAGCTTGAACAAGA
TTGCATTACCTGGGAGGTTATTGGTCTCGTGTGTGCAGTTCGTCTGTCAG
CGAGAATTGCAGGGTCTGCTAATCATAGCCGCCGGAATTGGGGGAAGATT
GTTATCGAGGAAGCGATCAGTGGATCAGACTCCGGGGCCGAAATCGTCAG
CGCATGTCGGCTTCGCCTCAGCCGGGGATTCGACCGACAAGCCATGACGG
AGGGCCTGGCAATGACAATCAGGCTTTCCGGCTACTCCTCTTCTCTTCAA
ACAATCCACTGCACCACCATGGAGCTGCTGTTTCAGTCCGGACTCCTCTC
CGTGTATTTGCAACCCAAAATAATATAATTGCAGCAGAACCTGGTCGATT
AGACAAGCCACTACGAGGATGCTGACGCAGCCCTTGTGGTGCAGGGCCCA
TCCTCCGCTATCACGGCCGGCCTGTGCCTTTGGGAGACGATCCGGCATTG
TTCTTCTCCCCAGGGCTTTTCAGCTGCGAGTCTCGTCCTCGTCCTCACTC
TCGCGTCTGCGCCATAAGAACCCTAGTGTCTCCTCTCATTCTTCGGTTGT
CTCCTCCTCCAATGCTTTGCTCTGTCCCGTCACTCGTCCGACTCTAGTCC
CTTCCATCGCCGCAGCCACCTCCGCTACCTCCGTCACCCTACCTCCAATG
ACCACCCAATCCAGAGACCACGGTGGCCACCATGGCCACCACCACCATCA
TCACCATCACGGAAACGTTTACCTTACTTCTACCGATAAACATGATGCCG
GTGTGCGAATTACGCGACTTGGCCTGCTCGCTAACCTCGCCATGGCCATC
GGGAAGTTCATCGGCGGCTACGTGTTCCATTCCCAAGCCCTCATCGCCGA
CGCCTACCACGCCCTTACCGATCTAGTTTCCGATTTCCTGACATTAGGCA
CGGTCGCCTGGTCGCTCAAGCCGCCGAGCGAGCGATTTCCTAATGGTTAC
GGCAAGATCGAAAGCATCGGAGCATTAGGGGTTAGCGGGTTGTTGCTCTG
CGGAGGTGTGTTCATGGGCCTCAATTCCGGCCAAGTTCTGCTGGACCAGT
TCTATCCCCAGGCCGCGGAAGCGATCGCGCATGTAGGCGCCCTGGGACAT
GGTCACTCGCATAGCCATGGCGTTGAGGCAATGGGCCCGAGCATTCATGC
CGCATGGCTTGCTGCGGGGTCCATCGTGGTGAAGGAGTGGTTATATCATG
CTAGTGAGTACCTTGAGGAATCTCTGCCCTAACACCAACTGCGAATGCTG
ACTGCGCCTTTCCCCGACAGCCATGAAAGTCGCGACGGAACGCAAGTCGT
CAGTACTAGCCTCCAACGCCATCCACCACCGTATCGACTCCCTGACCAGT
ATTGTCGCTCTCTTTACAATTGGCGGAACCTATCTCTTCCAGGACGCATC
CTGGCTGGACCCTGTGGGTGGACTGTTGATTTCGCTGATGGTCATCAAGG
CCGGATGGGGAAACACCAAGACCTCGTTGTTGGAGCTCGCCGATACGAAC
GTTGACGACGACATCAAGGAATCGGTACAGAAAGCCGCGGCTAAGATGCT
GGCGAAACTGGAAGGTGGCGATGCCATCAAGGTCCGTGATGTGCAGGGCA
TGAAGTCGGGACAAAATTATCTGATGGATGTCGAAATCGCTGTGCCGGGC
GCGTGGTCTGTCAGCCGGACCCGGCAGGTCGAGGAGTCCATTCGCACTGC
GGTCGGAGAAGGCGTGCGTGGAGTCAAGCGTCTCAAGGTTCGGTTTATCC
CCTTGGAGCACGAGGAGTTGACTTTCACGGAGGAGTTCATCCCTGCGGAT
GTCACTTCCCGTGCGCGTCCTGAGCCGGAGGATGGCGAAGAGGATGAGCA
TGACCATGACCATGACCATGAACATGAACCCCGCAAAACCCGCTGAGGGT
CATATTCTGGTCCTATGAGTAACATGGGTTGGCATTATCAGATCTGCCAG
ATCTATGTGTCAGTCGTTCACTAGCGTTTTGAACCCCCAATTCGATGATA
CCCGAGGATGGATAGTGGGGGAGACATCCAACATCCCGTCTGCTGCCGTC
GAGCCAGTTGGATAGAATAGATGATTGATAGGCGATCTCAGGTGGACGTA
GAGCGGGAAAGAAAGAGTGAGATCTTGGGGTCAAAATAGAAGGGATTGTA
TTTTCTACGATGACTGTGTATCTATCGGGTCTGAATGAATGTACCAGAGC
GCACTGAACTCGACCCCATGAGGCGATCCGCGGGATCTTCACTTTAG
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Coding sequence (CDS) from alignment at ch4:698896..701642+

>KJC3_004783-T1 ID=KJC3_004783-T1|Name=KJC3_004783-T1|organism=Aspergillus niger KJC3|type=CDS|length=2922bp|location=Sequence derived from alignment at ch4:698896..701642+ (Aspergillus niger KJC3)
ATGCTGACGCAGCCCTTGTGGTGCAGGGCCCATCCTCCGCTATCACGGCC
GGCCTGTGCCTTTGGGAGACGATCCGGCATTGTTCTTCTCCCCAGGGCTT
TTCAGCTGCGAGTCTCGTCCTCGTCCTCACTCTCGCGTCTGCGCCATAAG
AACCCTAGTGTCTCCTCTCATTCTTCGGTTGTCTCCTCCTCCAATGCTTT
GCTCTGTCCCGTCACTCGTCCGACTCTAGTCCCTTCCATCGCCGCAGCCA
CCTCCGCTACCTCCGTCACCCTACCTCCAATGACCACCCAATCCAGAGAC
CACGGTGGCCACCATGGCCACCACCACCATCATCACCATCACGGAAACGT
TTACCTTACTTCTACCGATAAACATGATGCCGGTGTGCGAATTACGCGAC
TTGGCCTGCTCGCTAACCTCGCCATGGCCATCGGGAAGTTCATCGGCGGC
TACGTGTTCCATTCCCAAGCCCTCATCGCCGACGCCTACCACGCCCTTAC
CGATCTAGTTTCCGATTTCCTGACATTAGGCACGGTCGCCTGGTCGCTCA
AGCCGCCGAGCGAGCGATTTCCTAATGGTTACGGCAAGATCGAAAGCATC
GGAGCATTAGGGGTTAGCGGGTTGTTGCTCTGCGGAGGTGTGTTCATGGG
CCTCAATTCCGGCCAAGTTCTGCTGGACCAGTTCTATCCCCAGGCCGCGG
AAGCGATCGCGCATGTAGGCGCCCTGGGACATGGTCACTCGCATAGCCAT
GGCGTTGAGGCAATGGGCCCGAGCATTCATGCCGCATGGCTTGCTGCGGG
GTCCATCGTGGTGAAGGAGTGGTTATATCATGCTACCATGAAAGTCGCGA
CGGAACGCAAGTCGTCAGTACTAGCCTCCAACGCCATCCACCACCGTATC
GACTCCCTGACCAGTATTGTCGCTCTCTTTACAATTGGCGGAACCTATCT
CTTCCAGGACGCATCCTGGCTGGACCCTGTGGGTGGACTGTTGATTTCGC
TGATGGTCATCAAGGCCGGATGGGGAAACACCAAGACCTCGTTGTTGGAG
CTCGCCGATACGAACGTTGACGACGACATCAAGGAATCGGTACAGAAAGC
CGCGGCTAAGATGCTGGCGAAACTGGAAGGTGGCGATGCCATCAAGGTCC
GTGATGTGCAGGGCATGAAGTCGGGACAAAATTATCTGATGGATGTCGAA
ATCGCTGTGCCGGGCGCGTGGTCTGTCAGCCGGACCCGGCAGGTCGAGGA
GTCCATTCGCACTGCGGTCGGAGAAGGCGTGCGTGGAGTCAAGCGTCTCA
AGGTTCGGTTTATCCCCTTGGAGCACGAGGAGTTGACTTTCACGGAGGAG
TTCATCCCTGCGGATGTCACTTCCCGTGCGCGTCCTGAGCCGGAGGATGG
CGAAGAGGATGAGCATGACCATGACCATGACCATGAACATGAACCCCGCA
AAACCCGCTGAATGCTGACGCAGCCCTTGTGGTGCAGGGCCCATCCTCCG
CTATCACGGCCGGCCTGTGCCTTTGGGAGACGATCCGGCATTGTTCTTCT
CCCCAGGGCTTTTCAGCTGCGAGTCTCGTCCTCGTCCTCACTCTCGCGTC
TGCGCCATAAGAACCCTAGTGTCTCCTCTCATTCTTCGGTTGTCTCCTCC
TCCAATGCTTTGCTCTGTCCCGTCACTCGTCCGACTCTAGTCCCTTCCAT
CGCCGCAGCCACCTCCGCTACCTCCGTCACCCTACCTCCAATGACCACCC
AATCCAGAGACCACGGTGGCCACCATGGCCACCACCACCATCATCACCAT
CACGGAAACGTTTACCTTACTTCTACCGATAAACATGATGCCGGTGTGCG
AATTACGCGACTTGGCCTGCTCGCTAACCTCGCCATGGCCATCGGGAAGT
TCATCGGCGGCTACGTGTTCCATTCCCAAGCCCTCATCGCCGACGCCTAC
CACGCCCTTACCGATCTAGTTTCCGATTTCCTGACATTAGGCACGGTCGC
CTGGTCGCTCAAGCCGCCGAGCGAGCGATTTCCTAATGGTTACGGCAAGA
TCGAAAGCATCGGAGCATTAGGGGTTAGCGGGTTGTTGCTCTGCGGAGGT
GTGTTCATGGGCCTCAATTCCGGCCAAGTTCTGCTGGACCAGTTCTATCC
CCAGGCCGCGGAAGCGATCGCGCATGTAGGCGCCCTGGGACATGGTCACT
CGCATAGCCATGGCGTTGAGGCAATGGGCCCGAGCATTCATGCCGCATGG
CTTGCTGCGGGGTCCATCGTGGTGAAGGAGTGGTTATATCATGCTACCAT
GAAAGTCGCGACGGAACGCAAGTCGTCAGTACTAGCCTCCAACGCCATCC
ACCACCGTATCGACTCCCTGACCAGTATTGTCGCTCTCTTTACAATTGGC
GGAACCTATCTCTTCCAGGACGCATCCTGGCTGGACCCTGTGGGTGGACT
GTTGATTTCGCTGATGGTCATCAAGGCCGGATGGGGAAACACCAAGACCT
CGTTGTTGGAGCTCGCCGATACGAACGTTGACGACGACATCAAGGAATCG
GTACAGAAAGCCGCGGCTAAGATGCTGGCGAAACTGGAAGGTGGCGATGC
CATCAAGGTCCGTGATGTGCAGGGCATGAAGTCGGGACAAAATTATCTGA
TGGATGTCGAAATCGCTGTGCCGGGCGCGTGGTCTGTCAGCCGGACCCGG
CAGGTCGAGGAGTCCATTCGCACTGCGGTCGGAGAAGGCGTGCGTGGAGT
CAAGCGTCTCAAGGTTCGGTTTATCCCCTTGGAGCACGAGGAGTTGACTT
TCACGGAGGAGTTCATCCCTGCGGATGTCACTTCCCGTGCGCGTCCTGAG
CCGGAGGATGGCGAAGAGGATGAGCATGACCATGACCATGACCATGAACA
TGAACCCCGCAAAACCCGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006812cation transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004783KJC3_004783Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004783-T1KJC3_004783-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004783-T1.utr5p1KJC3_004783-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_004783-T1.utr5p2KJC3_004783-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004783-T1.exon1KJC3_004783-T1.exon1Aspergillus niger KJC3exon
KJC3_004783-T1.exon2KJC3_004783-T1.exon2Aspergillus niger KJC3exon
KJC3_004783-T1.exon3KJC3_004783-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004783-T1.cdsKJC3_004783-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004783-T1.utr3p1KJC3_004783-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002524
DBxrefInterPro:IPR027469
DBxrefPFAM:PF01545
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:698896..701642 +
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