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KJC3_004793-T1, KJC3_004793-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004793-T1
Unique NameKJC3_004793-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:736414..738185-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004793-T1 ID=KJC3_004793-T1|Name=KJC3_004793-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1772bp|location=Sequence derived from alignment at ch4:736414..738185- (Aspergillus niger KJC3)
TGTACCTCTTTATGATCTTTGTTTGGAAAAGGTCATCGAACCAGAAATTA
AGTAATTATAGCTTATACCACCTGAAGGCAAGATTAAATATGGATTGGGA
GTGACGGTGTTCGAATATGCAGGTACCTGATGGGCATTTCATATATCCCC
GGGATGAAAATAAGACGTTGCTGACTGCTGACCCCTCACCGAGGAGGTAG
GAAGCGACCAGACAAGACATCAACTTTCTACCCGGCCTACTTTGAAGAAT
CCCCAGGCCCCTTGACAGACATTCCATGCTCAAGGGCCATGGCTATGAAT
TCCGATCTTACTCGCCCACTCTTGATCTCATCTAGCAGTACAATACACCA
TGCATCTGTTCCAGCGAGCCCCGCTTCTGAGAATGATACTCCGCCCTCCA
ACGCGGTCACCGTCGCCCTGCGATGGAACGAGTCAAAGACTATGATATGG
AGAGTACTAGCTACTTTCTGCGGTGCACTGGTCATGGGCGCCAATGATGC
AGCATATGGGGCGATAATCCCTTACGTTTGTACCACCTTCTAAACGCCCA
GCGAACACTCACATACAGTGCTAATCCGGGCTGCTTGCAACATCCAGCTC
CAGCTTGCCTACAACAAGAGCTATACTATCATTTCCCTAGTATTCCTGTC
CCCATTTTTGGGCTACACCATCTCCGCTGTCGTTAGTAATCTGATCCACC
AGCGCCTTGGTCGTCGTGGCGTGGCGTTCATCGGCCCAGCATGTCACTTG
CTTGCCTTTGCTGTCATCTCAACAAATCCCCCTTTTCCAGTGCTGGTGAT
AATGTACATCTTTGTTGGACTTGGCAGCGGGATTCAGAATGCCGGGTGGA
ATGTGTGGATCAGCAGTATGGCCAACTCTCACGAAGTCCTCGGATGTTTT
CACGGATTCTATGGCATCGGGGCTACAATTAGTCCCTTTATTGCGACTAG
CGTGATCACGAAAGCTGGCTGGAAATGGAATTCATACTATTACCTTCTGG
TAGGTAGACTGGACCTTTCCGACGACCTATTGTCTTCTGCCAATTCTAAT
GCGAATCCAAGACGGGGGCTGCGGTTTTAGAACTCGTCAACGCCACCAGC
GCCTTTTGGTCAGAGACTGCATCCAAGTATCAACAGGATCATCCGTCTTC
TGCTGATAGAGATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCA
TGTACAGAGTCACCTGGATCTGTTCTATCTTTCTCTTCCTGTATGGCGGC
ATCGAGGTCGCTATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCG
CCATGGCAGCCCCTTTGCATCTGGTATGGCTGGAACAGGCTTCTGGCTCG
GCGTCACGCTGGGCCGCTTCGTACTGGGGTTCGTCACACCTCGCATCGGA
GAGAAAATATCGATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATT
GGTCTTCTGGCTCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCAC
TGGTTGGGTTCTTCTTGGGAACCATTTTCCCCGGCGTTGTGGTGGTTGCT
ACTCGGTTGTTGCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGC
TGCGTTCTCTATGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTA
TTGCGCAGGCCAAGGGAGTGACAGTACTGCAGCCCATCTTAGTGGCAATG
TTGGTTGTTGCGCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCC
GCAGTCACTGCATGAAGTTTGA
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Coding sequence (CDS) from alignment at ch4:736414..738185-

>KJC3_004793-T1 ID=KJC3_004793-T1|Name=KJC3_004793-T1|organism=Aspergillus niger KJC3|type=CDS|length=4050bp|location=Sequence derived from alignment at ch4:736414..738185- (Aspergillus niger KJC3)
ACGGGGGCTGCGGTTTTAGAACTCGTCAACGCCACCAGCGCCTTTTGGTC
AGAGACTGCATCCAAGTATCAACAGGATCATCCGTCTTCTGCTGATAGAG
ATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTC
ACCTGGATCTGTTCTATCTTTCTCTTCCTGTATGGCGGCATCGAGGTCGC
TATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCATGGCAGCC
CCTTTGCATCTGGTATGGCTGGAACAGGCTTCTGGCTCGGCGTCACGCTG
GGCCGCTTCGTACTGGGGTTCGTCACACCTCGCATCGGAGAGAAAATATC
GATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTCTTCTGGC
TCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTC
TTCTTGGGAACCATTTTCCCCGGCGTTGTGGTGGTTGCTACTCGGTTGTT
GCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCGTTCTCTA
TGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCC
AAGGGAGTGACAGTACTGCAGCCCATCTTAGTGGCAATGTTGGTTGTTGC
GCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAGTCACTGC
ATGAAGTTTGACTCCAGCTTGCCTACAACAAGAGCTATACTATCATTTCC
CTAGTATTCCTGTCCCCATTTTTGGGCTACACCATCTCCGCTGTCGTTAG
TAATCTGATCCACCAGCGCCTTGGTCGTCGTGGCGTGGCGTTCATCGGCC
CAGCATGTCACTTGCTTGCCTTTGCTGTCATCTCAACAAATCCCCCTTTT
CCAGTGCTGGTGATAATGTACATCTTTGTTGGACTTGGCAGCGGGATTCA
GAATGCCGGGTGGAATGTGTGGATCAGCAGTATGGCCAACTCTCACGAAG
TCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCC
TTTATTGCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATA
CTATTACCTTCTGATGGCTATGAATTCCGATCTTACTCGCCCACTCTTGA
TCTCATCTAGCAGTACAATACACCATGCATCTGTTCCAGCGAGCCCCGCT
TCTGAGAATGATACTCCGCCCTCCAACGCGGTCACCGTCGCCCTGCGATG
GAACGAGTCAAAGACTATGATATGGAGAGTACTAGCTACTTTCTGCGGTG
CACTGGTCATGGGCGCCAATGATGCAGCATATGGGGCGATAATCCCTTAC
ACGGGGGCTGCGGTTTTAGAACTCGTCAACGCCACCAGCGCCTTTTGGTC
AGAGACTGCATCCAAGTATCAACAGGATCATCCGTCTTCTGCTGATAGAG
ATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTC
ACCTGGATCTGTTCTATCTTTCTCTTCCTGTATGGCGGCATCGAGGTCGC
TATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCATGGCAGCC
CCTTTGCATCTGGTATGGCTGGAACAGGCTTCTGGCTCGGCGTCACGCTG
GGCCGCTTCGTACTGGGGTTCGTCACACCTCGCATCGGAGAGAAAATATC
GATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTCTTCTGGC
TCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTC
TTCTTGGGAACCATTTTCCCCGGCGTTGTGGTGGTTGCTACTCGGTTGTT
GCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCGTTCTCTA
TGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCC
AAGGGAGTGACAGTACTGCAGCCCATCTTAGTGGCAATGTTGGTTGTTGC
GCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAGTCACTGC
ATGAAGTTTGACTCCAGCTTGCCTACAACAAGAGCTATACTATCATTTCC
CTAGTATTCCTGTCCCCATTTTTGGGCTACACCATCTCCGCTGTCGTTAG
TAATCTGATCCACCAGCGCCTTGGTCGTCGTGGCGTGGCGTTCATCGGCC
CAGCATGTCACTTGCTTGCCTTTGCTGTCATCTCAACAAATCCCCCTTTT
CCAGTGCTGGTGATAATGTACATCTTTGTTGGACTTGGCAGCGGGATTCA
GAATGCCGGGTGGAATGTGTGGATCAGCAGTATGGCCAACTCTCACGAAG
TCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCC
TTTATTGCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATA
CTATTACCTTCTGATGGCTATGAATTCCGATCTTACTCGCCCACTCTTGA
TCTCATCTAGCAGTACAATACACCATGCATCTGTTCCAGCGAGCCCCGCT
TCTGAGAATGATACTCCGCCCTCCAACGCGGTCACCGTCGCCCTGCGATG
GAACGAGTCAAAGACTATGATATGGAGAGTACTAGCTACTTTCTGCGGTG
CACTGGTCATGGGCGCCAATGATGCAGCATATGGGGCGATAATCCCTTAC
ACGGGGGCTGCGGTTTTAGAACTCGTCAACGCCACCAGCGCCTTTTGGTC
AGAGACTGCATCCAAGTATCAACAGGATCATCCGTCTTCTGCTGATAGAG
ATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTC
ACCTGGATCTGTTCTATCTTTCTCTTCCTGTATGGCGGCATCGAGGTCGC
TATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCATGGCAGCC
CCTTTGCATCTGGTATGGCTGGAACAGGCTTCTGGCTCGGCGTCACGCTG
GGCCGCTTCGTACTGGGGTTCGTCACACCTCGCATCGGAGAGAAAATATC
GATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTCTTCTGGC
TCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTC
TTCTTGGGAACCATTTTCCCCGGCGTTGTGGTGGTTGCTACTCGGTTGTT
GCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCGTTCTCTA
TGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCC
AAGGGAGTGACAGTACTGCAGCCCATCTTAGTGGCAATGTTGGTTGTTGC
GCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAGTCACTGC
ATGAAGTTTGACTCCAGCTTGCCTACAACAAGAGCTATACTATCATTTCC
CTAGTATTCCTGTCCCCATTTTTGGGCTACACCATCTCCGCTGTCGTTAG
TAATCTGATCCACCAGCGCCTTGGTCGTCGTGGCGTGGCGTTCATCGGCC
CAGCATGTCACTTGCTTGCCTTTGCTGTCATCTCAACAAATCCCCCTTTT
CCAGTGCTGGTGATAATGTACATCTTTGTTGGACTTGGCAGCGGGATTCA
GAATGCCGGGTGGAATGTGTGGATCAGCAGTATGGCCAACTCTCACGAAG
TCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCC
TTTATTGCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATA
CTATTACCTTCTGATGGCTATGAATTCCGATCTTACTCGCCCACTCTTGA
TCTCATCTAGCAGTACAATACACCATGCATCTGTTCCAGCGAGCCCCGCT
TCTGAGAATGATACTCCGCCCTCCAACGCGGTCACCGTCGCCCTGCGATG
GAACGAGTCAAAGACTATGATATGGAGAGTACTAGCTACTTTCTGCGGTG
CACTGGTCATGGGCGCCAATGATGCAGCATATGGGGCGATAATCCCTTAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004793KJC3_004793Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004793-T1KJC3_004793-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004793-T1.cdsKJC3_004793-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004793-T1.exon4KJC3_004793-T1.exon4Aspergillus niger KJC3exon
KJC3_004793-T1.exon3KJC3_004793-T1.exon3Aspergillus niger KJC3exon
KJC3_004793-T1.exon2KJC3_004793-T1.exon2Aspergillus niger KJC3exon
KJC3_004793-T1.exon1KJC3_004793-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004793-T1.utr5p2KJC3_004793-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004793-T1.utr5p1KJC3_004793-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:736414..738185 -
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