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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:806213..809617+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004822-T1 ID=KJC3_004822-T1|Name=KJC3_004822-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3405bp|location=Sequence derived from alignment at ch4:806213..809617+ (Aspergillus niger KJC3)
GCTGGATTCCCTCCAACCAGGACGTACAGTTCTAACAAAGTAGTAGTAGT
ACTTGCTGTTGCTAACTAATAGTACGAAAGATGGTTGTTCGCACGATAAC
GGTCTCCATGAAGAGGGAATAGTTGGAATCTCCCAGGTTCCACGAGCTCC
AGGAGTGCTCAATCCTTGATTGTTTCGCTAACATTCTTCCAGTTATCAGT
GGAAACTCTACGGCCTCCTGTAGATCTGCTTGCATCTTGGCGATGGTCTA
CTCTCGAGTTATCTTCTGAATTGAGACATCACAGGAATTCTGGGACCGAG
CTTCAGTTTGATGAGACCTCCCTCTTGCCAGTTAGTAGCCTGCCGGGGAG
GATGGTTGGTTGACATCGCAGCATTCCTCGCGAGCCGACAATAATGCTAC
CACATTCCCATGCCCCAGCCGGCTGCCATAACAAACGCAATGCTCCCTCA
CGAGCGCGCGTTTCCTCCCATCCATCATGGATCTCTCTGTTCTCTGATTA
TTCTTGTCCTGGCGTTTCCGTGGCTAGCAATTGCTACTCTTGCCTGGTCT
TCGGCGCCGTTGAATGCCGTCCGGAACCTTTGTGGAACTGGTATAGACAC
TGGGCCAGGTACCAGCTCGAGTGTATGGGTTAACGCATCTTCACAAGTCT
AAAGGAACCAGGGTCTGCCAGCTCTGGCACCGAAAGCAGGAAGAAGCGAC
AATGCCGCCATTGACCACGGTAATAGCGATAGCCGTGAGCTGCTCCGTCG
TCTTTATAGTTTCTGCTATAGTTGGCACGGTCATCTGGATAAGAGTCCGT
CAGGATCGTCTGTCGCTGGCGGTGGCAAACGCGAAGCAGGATGGATATGC
TCTGCAACAATACCAGGGGGAGACGCTGACGGAACTCTCGCGGGAGGAGG
GCACCGCATTGCGACAGTATGGACAGCTCCCATACGGAAAGCCGTCTGAG
TGGGGAGTTCTTTCATCTCGCGAGAGTCTCATCCAATCCCCTGCGGACTC
CGACACGTCATCTCCTTTGGATGAAAAAGCCCGTGACATACGTCGTTCAC
TATCGCGGTCCCTTTCAAGCCGCTCAGCGCGACTGTCACGACATCTCCTA
GGACCACAACGCCTCAGCTCACTGTCTCCACTGACAGAGCATTCAGAGAA
GCGGCAATCGACTTCACCGACAGTATCTGGAATTGATGATGGCGTGCCGA
ACTCTGCTGTCGAGGGTGCGTTCGAGCTGGCAACGGAGACCACACCGCGG
CATACTCCAGACCGCGAAGAAGAGCAATTGAGAGCAAGTCTCACCAGCCG
GCCAGGCTCTGGGGCATGGCCACTGAAGCATCATAGGGAGCGGTCCGGCA
GCCTGTACCCGCTCATGGAGGATAAACAGGACGGTTGCAACCCATCAAAT
AGCAGGGTACGAGGGGGAAGCATCACTGCTCAAACGGCCGGGTCTGCACC
CGAGCAACCTGTACCCCCACCACCATGTGCCTATCCACCAAATCGCTTCC
GTTTGTCAAGGAACGACTCGACCTGCCTCTCATCGTTGAGCCTCGAAACC
GCAGACAGCTCTATTTTGGAAGACAGCAGAAGAACGTCAACAAATGTCGA
CAGTACTTTCACATCGCCAGCTCTGCCTCCGTGTCCTACGTTCGCGCCGT
TTGATGCCAACGATGTCGGACGGATGGAATATGACCGAAGAGGTCTTGGG
GTAATTCCAGCTGTACCATCTCAATTCGTCTTTCCGTCAAGTTCTGGCAC
CGCGTGGGAAGCCCAGAGGCTCGAATCGCCCCGCAGCTCTCCGCGTCGGA
GCTTGACCACACGGAGTCCGAATCATTCGTCGGAACGCATCAGTCCATCG
CCACGACGGAGCGAGTCTCTCACTGATAACAAAGCCAAGCGAGACTCGTC
CCTGTGGGTGAAGCCTCTGGATCTGAGCCGTCCACCTTCCCTCAATCCAG
TACCTAATGGAGCCTTGGTGCCACACTTCAGTCAAATGCAGCGGCGTTCG
ATGTATAGCGATCAGCGGAAAGAGCTCGATCCATTTTACAATGTGATGAG
CAATTCTGTCATGAGCACTGATCCCCGATTGAAGCCTAGTTCTACTGGAA
TTCCGGATGGTCCTCTGCTAGGCCCGAATAGCCATCTTAAACCCCCTCTT
CCCTCTGCATTCAAAGGAAGCAGTGGCACTCGCAAAGGCCATCGGCGGCA
GAACTGCGTTCGGATCTCAATACATCCTCCAATCACCTTTAGTGGCCCAG
TGTTCTCGCCCACGGCCGAGGAGCCCGAGGAGACCGAAGAGATCGATACC
AGCCGGGCACAAGTTCCAAATTCATCAATCTCTCAAATTTCACTTCAGTC
CAACGGTTCAGGCCTTTCAGTGAGTCGATTCAGCCAAGACGAGCAGCAGA
AGGAGAACCCGCGAGTTACGGAGATTACAGCTGAGCCACCCCGCAACTCG
CAGGCAGGACCGCCCAAGCTTAGCGTGAACTCCCCTACCGATGCCGGGGA
ACGCACTCTGAGTATTATGGACATGGAGAAGTCCCTGCCTGATCTTGTGA
CGACTCTACCGCCCCCCAAGATTGATACCAGCCTGTCGAAGACGCCATCT
CCGGAAAAGAATAGTCCGGTCTGGATGATTCCACATTACAACAGCTCACC
AACGGGTTTTGAAAACTCCTCGAACCCTGGCAGTCCGCGCCGTACAGCCG
TCAAGGGACCGCGTCAACCTCCGCCACGATCAACAGCACGCAGCAGCTTC
CGCTCACTGAATCCCCTTGATGATAATGCCATGACGCAGTCAAGTCCGCC
GATGCGTCATTCGCGTGGTCCCAGTATGGGCAAGGAACCAGTTAGAAATG
CAGCCGAATCACCATTGCGTCCGAAGAATGACCCCCAAAACATGGTGGCT
CCGCGGTACCACGGTAGTCCGCATCAGATTGTTTCTCCGATCAGACACTC
TCAGGCGCAGCTCTGGCGGCCAGCGGCCGCTGTGCCAAAACCGCCAACTG
CGAACAGCGGTATCATAGTTCCCATTTGGGAAGACCGGGCTTCGGAACCC
AAGGGAAAGGGTCCGCGGACTTCTTCAGTTCTTTCGCCCAGCGAACATTC
AGCACAAGTTGGGCGGGCAAAGAGCCACCGATTAAAGCCCGGCCCCGGCA
GTGCCCGACACGGATTTCGAACCCCGACGAAAAAGCCTGTTGGACTGGGA
ATTGGAGCAGCTACACCGGGAAGCTTGTATGATGGGGATGGGTTCCTGAA
AGAATAGGTGCATGGAAGGACTGATAGTTGGCAGCGGCGTTGATTGTTTC
TCGTGTTTCCTTTGCTTGGCTAGCGTGCGGGCGTGTCTACCCTCCACTGT
AAAGATGAACGTAGGTAATTGGTAGGACTAATAAAAATACCTTAATCTAA
ACATG back to topCoding sequence (CDS) from alignment at ch4:806213..809617+ >KJC3_004822-T1 ID=KJC3_004822-T1|Name=KJC3_004822-T1|organism=Aspergillus niger KJC3|type=CDS|length=2556bp|location=Sequence derived from alignment at ch4:806213..809617+ (Aspergillus niger KJC3)
ATGCCGCCATTGACCACGGTAATAGCGATAGCCGTGAGCTGCTCCGTCGT
CTTTATAGTTTCTGCTATAGTTGGCACGGTCATCTGGATAAGAGTCCGTC
AGGATCGTCTGTCGCTGGCGGTGGCAAACGCGAAGCAGGATGGATATGCT
CTGCAACAATACCAGGGGGAGACGCTGACGGAACTCTCGCGGGAGGAGGG
CACCGCATTGCGACAGTATGGACAGCTCCCATACGGAAAGCCGTCTGAGT
GGGGAGTTCTTTCATCTCGCGAGAGTCTCATCCAATCCCCTGCGGACTCC
GACACGTCATCTCCTTTGGATGAAAAAGCCCGTGACATACGTCGTTCACT
ATCGCGGTCCCTTTCAAGCCGCTCAGCGCGACTGTCACGACATCTCCTAG
GACCACAACGCCTCAGCTCACTGTCTCCACTGACAGAGCATTCAGAGAAG
CGGCAATCGACTTCACCGACAGTATCTGGAATTGATGATGGCGTGCCGAA
CTCTGCTGTCGAGGGTGCGTTCGAGCTGGCAACGGAGACCACACCGCGGC
ATACTCCAGACCGCGAAGAAGAGCAATTGAGAGCAAGTCTCACCAGCCGG
CCAGGCTCTGGGGCATGGCCACTGAAGCATCATAGGGAGCGGTCCGGCAG
CCTGTACCCGCTCATGGAGGATAAACAGGACGGTTGCAACCCATCAAATA
GCAGGGTACGAGGGGGAAGCATCACTGCTCAAACGGCCGGGTCTGCACCC
GAGCAACCTGTACCCCCACCACCATGTGCCTATCCACCAAATCGCTTCCG
TTTGTCAAGGAACGACTCGACCTGCCTCTCATCGTTGAGCCTCGAAACCG
CAGACAGCTCTATTTTGGAAGACAGCAGAAGAACGTCAACAAATGTCGAC
AGTACTTTCACATCGCCAGCTCTGCCTCCGTGTCCTACGTTCGCGCCGTT
TGATGCCAACGATGTCGGACGGATGGAATATGACCGAAGAGGTCTTGGGG
TAATTCCAGCTGTACCATCTCAATTCGTCTTTCCGTCAAGTTCTGGCACC
GCGTGGGAAGCCCAGAGGCTCGAATCGCCCCGCAGCTCTCCGCGTCGGAG
CTTGACCACACGGAGTCCGAATCATTCGTCGGAACGCATCAGTCCATCGC
CACGACGGAGCGAGTCTCTCACTGATAACAAAGCCAAGCGAGACTCGTCC
CTGTGGGTGAAGCCTCTGGATCTGAGCCGTCCACCTTCCCTCAATCCAGT
ACCTAATGGAGCCTTGGTGCCACACTTCAGTCAAATGCAGCGGCGTTCGA
TGTATAGCGATCAGCGGAAAGAGCTCGATCCATTTTACAATGTGATGAGC
AATTCTGTCATGAGCACTGATCCCCGATTGAAGCCTAGTTCTACTGGAAT
TCCGGATGGTCCTCTGCTAGGCCCGAATAGCCATCTTAAACCCCCTCTTC
CCTCTGCATTCAAAGGAAGCAGTGGCACTCGCAAAGGCCATCGGCGGCAG
AACTGCGTTCGGATCTCAATACATCCTCCAATCACCTTTAGTGGCCCAGT
GTTCTCGCCCACGGCCGAGGAGCCCGAGGAGACCGAAGAGATCGATACCA
GCCGGGCACAAGTTCCAAATTCATCAATCTCTCAAATTTCACTTCAGTCC
AACGGTTCAGGCCTTTCAGTGAGTCGATTCAGCCAAGACGAGCAGCAGAA
GGAGAACCCGCGAGTTACGGAGATTACAGCTGAGCCACCCCGCAACTCGC
AGGCAGGACCGCCCAAGCTTAGCGTGAACTCCCCTACCGATGCCGGGGAA
CGCACTCTGAGTATTATGGACATGGAGAAGTCCCTGCCTGATCTTGTGAC
GACTCTACCGCCCCCCAAGATTGATACCAGCCTGTCGAAGACGCCATCTC
CGGAAAAGAATAGTCCGGTCTGGATGATTCCACATTACAACAGCTCACCA
ACGGGTTTTGAAAACTCCTCGAACCCTGGCAGTCCGCGCCGTACAGCCGT
CAAGGGACCGCGTCAACCTCCGCCACGATCAACAGCACGCAGCAGCTTCC
GCTCACTGAATCCCCTTGATGATAATGCCATGACGCAGTCAAGTCCGCCG
ATGCGTCATTCGCGTGGTCCCAGTATGGGCAAGGAACCAGTTAGAAATGC
AGCCGAATCACCATTGCGTCCGAAGAATGACCCCCAAAACATGGTGGCTC
CGCGGTACCACGGTAGTCCGCATCAGATTGTTTCTCCGATCAGACACTCT
CAGGCGCAGCTCTGGCGGCCAGCGGCCGCTGTGCCAAAACCGCCAACTGC
GAACAGCGGTATCATAGTTCCCATTTGGGAAGACCGGGCTTCGGAACCCA
AGGGAAAGGGTCCGCGGACTTCTTCAGTTCTTTCGCCCAGCGAACATTCA
GCACAAGTTGGGCGGGCAAAGAGCCACCGATTAAAGCCCGGCCCCGGCAG
TGCCCGACACGGATTTCGAACCCCGACGAAAAAGCCTGTTGGACTGGGAA
TTGGAGCAGCTACACCGGGAAGCTTGTATGATGGGGATGGGTTCCTGAAA
GAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004822-T1.utr5p1 | KJC3_004822-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004822-T1.utr3p1 | KJC3_004822-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:806213..809617 + |
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