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KJC3_004837-T1, KJC3_004837-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004837-T1
Unique NameKJC3_004837-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:842703..845578-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004837-T1 ID=KJC3_004837-T1|Name=KJC3_004837-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2876bp|location=Sequence derived from alignment at ch4:842703..845578- (Aspergillus niger KJC3)
ATGCCTCTGGAAGCCCGCGTGAAATCTGTCCTGTCCGGCGACACGGTGGT
GCTGTCGCATATCACCAACCCCGGCCAGGAACGCATTCTCAGTCTTGCAT
ATGTCTCCGCGCCGAGGCTACGCAGAGAGGGAGATGAGGTGAGTTGGTCC
TTTCTTGTGCTTTCAGATGCAATGTCATTGCGCGGTACAGCCGTTTCTTT
TCTGCTTGGATAGGTGGCCTCTACATTGGGGACAATTGGCTGCATTCCAT
CCGAATCTCACATTCTTGACTGAATTGGACTCGATTCCATGTTTCGTTTT
GACTAGCACCGCTTAATTGCTTTATCAATACCTTGCTAACTTTAGCCGTT
TTCTTTCCGCAGCCATACGGCTTCCATTCCCGAGAGTTTCTCCGCGAGCT
ACTAGTCGGAAAAGTCGTGCAATTTCAAGTCCTGTACACCATCCCTACCG
GTGCTAAGCGCGACTACGGTACCATCAAACTCCCGACTTTCGACGTCTCC
CTCCCCGACATCAGCGTCCAGGAAGGATGGACTCGTGTCCGCGAAGAGGC
TGGCAAGCGCAGCGACGAGTCCGAAGAGACTGTGGCGTACCTGCAACGAC
TCCGTGCATTGGAGGAACATGCCCAGACGGAGGGCAAGGGAACATGGGCT
GGCACAGAGAATGGTCGCACAGAGACCGCTTACGAGTTGTCTGACCCTAA
GGCGCTGGTTGACGAATGGAAGGACAAGCACCTGGAAGGTATCGTCGAGA
GGGTTCTGAATGGCGACCGACTGATCGTCCGTTTGCTCCTCTCTTCGGAG
GAACACCTGCAGGTTGTCGCCGCTATGGCGGGTGTTCGTGCGCCAGCAGC
CAAGAGAGTGACGGCTGACGGCAAGGAGCAGCCTGCAGAGCCGTATGGAG
ACGAGGCATTCCAGTTCGTCGAGTCGAGGATTCTGCAGCGCAAGGTCCAG
GTGTCTCTTCTGGGCGTCACCCCTCAGGGTCAACTGATTGCTAGTGTCCT
TCACCCGAACGGCAATGTTGCCAAGTTCCTGCTGGAAGCTGGTCTTGCCC
GTTGCCACGATCATCACTCTGCCCTGCTCGGTACTGAGATGGCAGCTTTC
CGCCGTGCAGAGAAAGTGGCCAAGGACGCCAGAGTGGGCATCTTCACTGG
TCTGGTTGCTCCTAAGGGTCCTGCTGGCGGGGCCGAGGACTACGTTGTTG
GCCGCGTGCTGAATGCAGACACGCTCTTTATCCGCAACAAGGCCGGTCAG
GAGAAGAAGATCAGTCTCAGCAGTGTCAGGCAACCGAAGCCATCTGATCC
CAAGCAGGCTCCTTTTGCTGCCGATGCCAAGGAGTTCGTGCGCAAGAGGA
TCATTGGAAAGCATGTCAAGGTCACCATTAACGGCAAGAAGCCCGCTACG
GAGGGATTCGAGGAGAGGGAGGTTGCCACTGTTGTTCACGGAAACACCAA
CATCGCTTTGGCCCTTGTCCAGGCGGGTTACGCTTCCGTTATCCGCCACC
GCCAGGATGACGAGGACCGGTCTCCTGAATATGACAACCTCATGCTTGCT
GAAGCAGAGGCCCAGGCCGAAGGCAAGGGCATGTGGGCTGCTAAGCCCCC
CAAGCCCAAGCAGTACCAGGATTACTCGGAAAGTGTTCAGAAGGCCAAGA
TGGAAGTTTCCATTCTCCAGCGCCAGAAGCGTGTGCCGGCTATTGTCGAC
TTTGTCAAGTCAGGATCTCGGTTCACCGTTCTGGTTCCTCGTGAGAACGC
CAAGTTGACTCTCGTCTTGTCGGGTATCCGCGCTCCCCGGTCTGCCCGTA
ACCCCGGTGAGGCGTCCGAGCCTTGTGGCCAGGAGGCTCATGATCTGGCG
AACAAGCGCTGCATGCAGCGTGATGTTGAGATCGATGTAGAGACCATTGA
CAAGGTCGGTGGATTTATTGGTACTCTGTATGTGAACAAGGAGAACTTCA
CCAAGGTACTCCTTGAGGAGGGTCTTGCTACTGTTCACGCTTACTCTGCC
GAGCAGTCTGGTCACGCTACAGAGTACTTTGCTGCAGAGCAGAGGGCCAA
GGAGGCTCGCAAGGGTCTTTGGCACGACTGGGATCCTAGCAAGGACGTCG
TTGAAGACGAGGAGGAGCCTGCTAACAGCAACAACAATACTGACACCGAG
GTTGCCCAGCGTCGCAAGGACTACCGCGACGTGATTGTCACTTATGCCGA
CCCTACTACTGGCCGCGTTAAGGTCCAACAGATTGGCACAGGTACCTCTG
CCTTGACGGAGCTGATGAGTGCTTTCCGTTCGTTTCACCTCAACAAGGCC
AACGACACTCCGCTGCCTGGACCTCCCAAGGCTGGTGACTTTGTTGCCGC
CAAGTTCACCGAGGACAACGAGTGGTACCGCGCTAAGGTCCGTCGCAATG
ATCGCGAGAACCAGCAGGCTGAGGTTGTTTACATTGATTTCGGTAACTCG
GAAGTCCTGCCCTGGTCCCGCCTCCGGCCCTTGAGCCAGCCGCAGTTCTC
CGTCCAGAAGCTTCGCGCCCAGGCGGCTGATGCAGTGCTCTCCTTTGTCC
AATTCCCTGGTGCCGAAGATTACTTGCAGGATGCAGTCAGCTTCCTAGAA
GACCAAGTCTACAACCGTGAGCTTGTTGCCAACGTCGACTACGTGTCTCC
GGACGGAACCCTGCACGTCACCTTGCTGGACCCTACCGAGTCCAAGAACT
TGGATCACAGTATCAATGCCGACATTGTTCGTGAGGGTTTGGCCATGGTG
CCCAGGAAACTGAAGGCCTGGGAGCGGGCCGCTACTGAGACACTGTCGCA
CCTTCGCAACGTAGAGGAGGAGGCGAAGCAGGAACGACGGGGTATGTGGG
AGTATGGCGATCTGACCGAGGACTGA
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Coding sequence (CDS) from alignment at ch4:842703..845578-

>KJC3_004837-T1 ID=KJC3_004837-T1|Name=KJC3_004837-T1|organism=Aspergillus niger KJC3|type=CDS|length=5304bp|location=Sequence derived from alignment at ch4:842703..845578- (Aspergillus niger KJC3)
CCATACGGCTTCCATTCCCGAGAGTTTCTCCGCGAGCTACTAGTCGGAAA
AGTCGTGCAATTTCAAGTCCTGTACACCATCCCTACCGGTGCTAAGCGCG
ACTACGGTACCATCAAACTCCCGACTTTCGACGTCTCCCTCCCCGACATC
AGCGTCCAGGAAGGATGGACTCGTGTCCGCGAAGAGGCTGGCAAGCGCAG
CGACGAGTCCGAAGAGACTGTGGCGTACCTGCAACGACTCCGTGCATTGG
AGGAACATGCCCAGACGGAGGGCAAGGGAACATGGGCTGGCACAGAGAAT
GGTCGCACAGAGACCGCTTACGAGTTGTCTGACCCTAAGGCGCTGGTTGA
CGAATGGAAGGACAAGCACCTGGAAGGTATCGTCGAGAGGGTTCTGAATG
GCGACCGACTGATCGTCCGTTTGCTCCTCTCTTCGGAGGAACACCTGCAG
GTTGTCGCCGCTATGGCGGGTGTTCGTGCGCCAGCAGCCAAGAGAGTGAC
GGCTGACGGCAAGGAGCAGCCTGCAGAGCCGTATGGAGACGAGGCATTCC
AGTTCGTCGAGTCGAGGATTCTGCAGCGCAAGGTCCAGGTGTCTCTTCTG
GGCGTCACCCCTCAGGGTCAACTGATTGCTAGTGTCCTTCACCCGAACGG
CAATGTTGCCAAGTTCCTGCTGGAAGCTGGTCTTGCCCGTTGCCACGATC
ATCACTCTGCCCTGCTCGGTACTGAGATGGCAGCTTTCCGCCGTGCAGAG
AAAGTGGCCAAGGACGCCAGAGTGGGCATCTTCACTGGTCTGGTTGCTCC
TAAGGGTCCTGCTGGCGGGGCCGAGGACTACGTTGTTGGCCGCGTGCTGA
ATGCAGACACGCTCTTTATCCGCAACAAGGCCGGTCAGGAGAAGAAGATC
AGTCTCAGCAGTGTCAGGCAACCGAAGCCATCTGATCCCAAGCAGGCTCC
TTTTGCTGCCGATGCCAAGGAGTTCGTGCGCAAGAGGATCATTGGAAAGC
ATGTCAAGGTCACCATTAACGGCAAGAAGCCCGCTACGGAGGGATTCGAG
GAGAGGGAGGTTGCCACTGTTGTTCACGGAAACACCAACATCGCTTTGGC
CCTTGTCCAGGCGGGTTACGCTTCCGTTATCCGCCACCGCCAGGATGACG
AGGACCGGTCTCCTGAATATGACAACCTCATGCTTGCTGAAGCAGAGGCC
CAGGCCGAAGGCAAGGGCATGTGGGCTGCTAAGCCCCCCAAGCCCAAGCA
GTACCAGGATTACTCGGAAAGTGTTCAGAAGGCCAAGATGGAAGTTTCCA
TTCTCCAGCGCCAGAAGCGTGTGCCGGCTATTGTCGACTTTGTCAAGTCA
GGATCTCGGTTCACCGTTCTGGTTCCTCGTGAGAACGCCAAGTTGACTCT
CGTCTTGTCGGGTATCCGCGCTCCCCGGTCTGCCCGTAACCCCGGTGAGG
CGTCCGAGCCTTGTGGCCAGGAGGCTCATGATCTGGCGAACAAGCGCTGC
ATGCAGCGTGATGTTGAGATCGATGTAGAGACCATTGACAAGGTCGGTGG
ATTTATTGGTACTCTGTATGTGAACAAGGAGAACTTCACCAAGGTACTCC
TTGAGGAGGGTCTTGCTACTGTTCACGCTTACTCTGCCGAGCAGTCTGGT
CACGCTACAGAGTACTTTGCTGCAGAGCAGAGGGCCAAGGAGGCTCGCAA
GGGTCTTTGGCACGACTGGGATCCTAGCAAGGACGTCGTTGAAGACGAGG
AGGAGCCTGCTAACAGCAACAACAATACTGACACCGAGGTTGCCCAGCGT
CGCAAGGACTACCGCGACGTGATTGTCACTTATGCCGACCCTACTACTGG
CCGCGTTAAGGTCCAACAGATTGGCACAGGTACCTCTGCCTTGACGGAGC
TGATGAGTGCTTTCCGTTCGTTTCACCTCAACAAGGCCAACGACACTCCG
CTGCCTGGACCTCCCAAGGCTGGTGACTTTGTTGCCGCCAAGTTCACCGA
GGACAACGAGTGGTACCGCGCTAAGGTCCGTCGCAATGATCGCGAGAACC
AGCAGGCTGAGGTTGTTTACATTGATTTCGGTAACTCGGAAGTCCTGCCC
TGGTCCCGCCTCCGGCCCTTGAGCCAGCCGCAGTTCTCCGTCCAGAAGCT
TCGCGCCCAGGCGGCTGATGCAGTGCTCTCCTTTGTCCAATTCCCTGGTG
CCGAAGATTACTTGCAGGATGCAGTCAGCTTCCTAGAAGACCAAGTCTAC
AACCGTGAGCTTGTTGCCAACGTCGACTACGTGTCTCCGGACGGAACCCT
GCACGTCACCTTGCTGGACCCTACCGAGTCCAAGAACTTGGATCACAGTA
TCAATGCCGACATTGTTCGTGAGGGTTTGGCCATGGTGCCCAGGAAACTG
AAGGCCTGGGAGCGGGCCGCTACTGAGACACTGTCGCACCTTCGCAACGT
AGAGGAGGAGGCGAAGCAGGAACGACGGGGTATGTGGGAGTATGGCGATC
TGACCGAGGACTGAATGCCTCTGGAAGCCCGCGTGAAATCTGTCCTGTCC
GGCGACACGGTGGTGCTGTCGCATATCACCAACCCCGGCCAGGAACGCAT
TCTCAGTCTTGCATATGTCTCCGCGCCGAGGCTACGCAGAGAGGGAGATG
AGCCATACGGCTTCCATTCCCGAGAGTTTCTCCGCGAGCTACTAGTCGGA
AAAGTCGTGCAATTTCAAGTCCTGTACACCATCCCTACCGGTGCTAAGCG
CGACTACGGTACCATCAAACTCCCGACTTTCGACGTCTCCCTCCCCGACA
TCAGCGTCCAGGAAGGATGGACTCGTGTCCGCGAAGAGGCTGGCAAGCGC
AGCGACGAGTCCGAAGAGACTGTGGCGTACCTGCAACGACTCCGTGCATT
GGAGGAACATGCCCAGACGGAGGGCAAGGGAACATGGGCTGGCACAGAGA
ATGGTCGCACAGAGACCGCTTACGAGTTGTCTGACCCTAAGGCGCTGGTT
GACGAATGGAAGGACAAGCACCTGGAAGGTATCGTCGAGAGGGTTCTGAA
TGGCGACCGACTGATCGTCCGTTTGCTCCTCTCTTCGGAGGAACACCTGC
AGGTTGTCGCCGCTATGGCGGGTGTTCGTGCGCCAGCAGCCAAGAGAGTG
ACGGCTGACGGCAAGGAGCAGCCTGCAGAGCCGTATGGAGACGAGGCATT
CCAGTTCGTCGAGTCGAGGATTCTGCAGCGCAAGGTCCAGGTGTCTCTTC
TGGGCGTCACCCCTCAGGGTCAACTGATTGCTAGTGTCCTTCACCCGAAC
GGCAATGTTGCCAAGTTCCTGCTGGAAGCTGGTCTTGCCCGTTGCCACGA
TCATCACTCTGCCCTGCTCGGTACTGAGATGGCAGCTTTCCGCCGTGCAG
AGAAAGTGGCCAAGGACGCCAGAGTGGGCATCTTCACTGGTCTGGTTGCT
CCTAAGGGTCCTGCTGGCGGGGCCGAGGACTACGTTGTTGGCCGCGTGCT
GAATGCAGACACGCTCTTTATCCGCAACAAGGCCGGTCAGGAGAAGAAGA
TCAGTCTCAGCAGTGTCAGGCAACCGAAGCCATCTGATCCCAAGCAGGCT
CCTTTTGCTGCCGATGCCAAGGAGTTCGTGCGCAAGAGGATCATTGGAAA
GCATGTCAAGGTCACCATTAACGGCAAGAAGCCCGCTACGGAGGGATTCG
AGGAGAGGGAGGTTGCCACTGTTGTTCACGGAAACACCAACATCGCTTTG
GCCCTTGTCCAGGCGGGTTACGCTTCCGTTATCCGCCACCGCCAGGATGA
CGAGGACCGGTCTCCTGAATATGACAACCTCATGCTTGCTGAAGCAGAGG
CCCAGGCCGAAGGCAAGGGCATGTGGGCTGCTAAGCCCCCCAAGCCCAAG
CAGTACCAGGATTACTCGGAAAGTGTTCAGAAGGCCAAGATGGAAGTTTC
CATTCTCCAGCGCCAGAAGCGTGTGCCGGCTATTGTCGACTTTGTCAAGT
CAGGATCTCGGTTCACCGTTCTGGTTCCTCGTGAGAACGCCAAGTTGACT
CTCGTCTTGTCGGGTATCCGCGCTCCCCGGTCTGCCCGTAACCCCGGTGA
GGCGTCCGAGCCTTGTGGCCAGGAGGCTCATGATCTGGCGAACAAGCGCT
GCATGCAGCGTGATGTTGAGATCGATGTAGAGACCATTGACAAGGTCGGT
GGATTTATTGGTACTCTGTATGTGAACAAGGAGAACTTCACCAAGGTACT
CCTTGAGGAGGGTCTTGCTACTGTTCACGCTTACTCTGCCGAGCAGTCTG
GTCACGCTACAGAGTACTTTGCTGCAGAGCAGAGGGCCAAGGAGGCTCGC
AAGGGTCTTTGGCACGACTGGGATCCTAGCAAGGACGTCGTTGAAGACGA
GGAGGAGCCTGCTAACAGCAACAACAATACTGACACCGAGGTTGCCCAGC
GTCGCAAGGACTACCGCGACGTGATTGTCACTTATGCCGACCCTACTACT
GGCCGCGTTAAGGTCCAACAGATTGGCACAGGTACCTCTGCCTTGACGGA
GCTGATGAGTGCTTTCCGTTCGTTTCACCTCAACAAGGCCAACGACACTC
CGCTGCCTGGACCTCCCAAGGCTGGTGACTTTGTTGCCGCCAAGTTCACC
GAGGACAACGAGTGGTACCGCGCTAAGGTCCGTCGCAATGATCGCGAGAA
CCAGCAGGCTGAGGTTGTTTACATTGATTTCGGTAACTCGGAAGTCCTGC
CCTGGTCCCGCCTCCGGCCCTTGAGCCAGCCGCAGTTCTCCGTCCAGAAG
CTTCGCGCCCAGGCGGCTGATGCAGTGCTCTCCTTTGTCCAATTCCCTGG
TGCCGAAGATTACTTGCAGGATGCAGTCAGCTTCCTAGAAGACCAAGTCT
ACAACCGTGAGCTTGTTGCCAACGTCGACTACGTGTCTCCGGACGGAACC
CTGCACGTCACCTTGCTGGACCCTACCGAGTCCAAGAACTTGGATCACAG
TATCAATGCCGACATTGTTCGTGAGGGTTTGGCCATGGTGCCCAGGAAAC
TGAAGGCCTGGGAGCGGGCCGCTACTGAGACACTGTCGCACCTTCGCAAC
GTAGAGGAGGAGGCGAAGCAGGAACGACGGGGTATGTGGGAGTATGGCGA
TCTGACCGAGGACTGAATGCCTCTGGAAGCCCGCGTGAAATCTGTCCTGT
CCGGCGACACGGTGGTGCTGTCGCATATCACCAACCCCGGCCAGGAACGC
ATTCTCAGTCTTGCATATGTCTCCGCGCCGAGGCTACGCAGAGAGGGAGA
TGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016442RISC complex
Vocabulary: Biological Process
TermDefinition
GO:0031047gene silencing by RNA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004837KJC3_004837Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004837-T1KJC3_004837-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004837-T1.cdsKJC3_004837-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004837-T1.exon2KJC3_004837-T1.exon2Aspergillus niger KJC3exon
KJC3_004837-T1.exon1KJC3_004837-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR016685
DBxrefInterPro:IPR035437
DBxrefInterPro:IPR016071
DBxrefInterPro:IPR002999
DBxrefPFAM:PF00567
DBxrefPFAM:PF00565
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:842703..845578 -
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