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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:915866..918456- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004858-T1 ID=KJC3_004858-T1|Name=KJC3_004858-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2591bp|location=Sequence derived from alignment at ch4:915866..918456- (Aspergillus niger KJC3)
TAGTACCGTTACCTTCCTTTCCATTTCACCATGATATACCACCTCCTCTT
TCTCTCGCTCTGCTGCTGCTACTCGCGCCCACGGAGAACGTACTCCGAGC
GATATTTTACTTACTGACCTGGCCCCAATTATTTAAAATTTCCAGGTGCA
GGTTTCTAGAACGGTTACTGCCAGTGGCCACGCTGGTGTGGAACATCGGG
ACTGGGCCAGCCTGATTCCGTTTCGGTACTCGCATTTTACTCAACTCTTC
CTTACCACTACGGCCTCTCCCACTTGCAGGCTTCCCGTTGGCGTCGCCGT
AGTCTAATCCACCTCTCCTCCTCATCCATTCCCATCCCCTCGGGCCTGCT
CGACTCACCCCGAGAAGATTTGTCTTTCTCTGACCTCAATTGTGTCTTTC
TCTATTCCCTCTCCTCTACTATACTTCTCTCCCCCCCTTTCTACCTTTCA
CTTCACCTGCGCCCTGAACGCACACCACCCCCTCGTTCTCGCCATTCACA
CTCCTCCCCTAGTCTTGGTTGGAGGGGATGATGCCGATTACTTTCTAATA
CTCCCGGCACTGTGTTGATCCCGTATTCCCTCCAATGTCTGGTTCGGCGT
TCCCTCGCAGTTGAATACGCCCCTTTATTGAACCGGCTCATTTTTCATCA
TTCCTGATCCGACACCAAATTCGTCCATCTGAATCTCTGGTATGTACTGA
TTCGGAGTCGAGCTTGCGAAGTTATCGTTGGGAGGTCCGTGGCTGATCGG
CATCAGCTATCTTCGGTCTACCTACACACCTGCGGGACGTCTACCCGAAT
CTTCTGTCGTTATAGTACTCGCTTTGGGCACGGGCCTGACGGATCAATCG
TTCGACGTGCGGGCTATAGCAGCGGTCTGGATTTCGCCAGCCATTTTAAT
ACACTCGACATATCTTTAGAACCGTCGGTGGGGAGTTCGGCCATCTTTGC
AAGACACCTCCATCAAGTGGGAGCGTGGACCAATCGAATCCGGCATCGAA
GCCACCTTATAATTCCCATTCGCTCGCACACCATCGTTGAAAACGCCAGG
AGCTAGTCAACGAGTACGGTCGGAATATTCGCCATGCGGGCCGACTTCCT
TCTTCCACCATTGCTTGGTGTGATTGCCTTGCTTGCTTGGCCTGTGTCGG
TCGCATCCTCTCTTACCTATTGTTCTTCGGCAAATACAGGCTCCTCGCAG
GCAGCAAGTATGTGATACTCGTGCGTTATCATCCTACGGTCACTAACCTC
ACGCAGACGAAAGTACCTACCAGTCCAATGGTCTTTGCGAGGACCACTGC
AGCAACTATGCGTTTGGAATCCTTCAAGGGTACGACTGCTGGTGCTCGAA
CATTGTTCCCAATGAGGCGACCAACGTGAACGTTTCGCAGTGTAGCCAGG
ATTGTCCTGGTTACCCCGATGATAGCTGTGGAAGTACTTCGAAGGGCCTT
TACGGTTACGTTGCGATCGTTGGACAACAGCCGTCCGGAACAGCGACCGT
CTCTACGACATCGACATCTTCTACCTCGGTCAGTAGAGCCCTTTCCTACT
CGTTCGGAGTCTTGTGGTCGTGAATTGCGCACTGCCAATGTCTCGAGTCG
CCAGGCATGCTAGCCTTCTATGGCTGGACGTTCCCCGCATGGACCGTTTC
TCTGGCACAGCGAACAAGCTTGTTGACAGTGTTGCTATCAACTGTGCCAT
GGCTGCTTCGATCGCTGAAGTGCGCAATGACCTGCCAAGCCTCAATGCTT
ATGATACTGACCAGGACTGACCTTTTCTAGACATCTTCATCATCTGAAAC
TACTGCCGCTACGACGACGGGAGAATCTGTGGCGGTCACAACCGATTCTG
GTGTGGTCAAAACGGTCACAATTCCCGCTGCCACAAAAGCAACTTCAACG
TCTGCAGCGGACAACCTTTCATCCGCAAAGAGTGACAACAACTCTGGAAT
GAGCTCGGGTACCATCGCTGGTGTCGTGGTAGGCTCCGTTGGTGGTGCAC
TCGCCATCCTAGCCCTGATATTCGTGTTGTTCTTCGCGAAACGCAAATCG
CGGTCGAACAGCCCAGATCCAAGTGTACAGTCCATCCTGCTGGATGGAAG
ACAAAGCAAAGGCTCACAGATGAGTTTTATGAAGGGCATGTTTTCCGACA
ATCATAGTCATACCTTGTCTGCTGGGTCCGCTGCCAGCCGCTTGCCGACG
TTTACGGACAACCGCATGAAAACCGATACCGTTCTCTACGCGAATGGCCG
CCGAGATAGCGATGTGTCACTCCAGGATAATGAAGATTATTCTCGGCCTG
TGTTGCGGGTCAGTTCCCATGTTTCCGTGATGCCGATTATTCAAACGCTA
ACACGTGACGCAGCTCACGAACCCCGACTAACGGTTGGGTGTCGCAGAAC
CCTATCTCCTCGCGTTTTGCATTTGCATCTCCTATGTCTTTCGATTTGCG
TGTTTCGGCGAAAACAGCGGTGTTATGATACCCATTTGTCACATAATCCT
TGACTTCCTTTTCATTCGACTACAGGAGAGACGATGGACTCGACAGCCCC
ACCCCTCCGACATAAACCCCCACCTCCGGTGTTTCGATCAT back to topCoding sequence (CDS) from alignment at ch4:915866..918456- >KJC3_004858-T1 ID=KJC3_004858-T1|Name=KJC3_004858-T1|organism=Aspergillus niger KJC3|type=CDS|length=4410bp|location=Sequence derived from alignment at ch4:915866..918456- (Aspergillus niger KJC3)
CTCACGAACCCCGACTAAGGCATGTTTTCCGACAATCATAGTCATACCTT
GTCTGCTGGGTCCGCTGCCAGCCGCTTGCCGACGTTTACGGACAACCGCA
TGAAAACCGATACCGTTCTCTACGCGAATGGCCGCCGAGATAGCGATGTG
TCACTCCAGGATAATGAAGATTATTCTCGGCCTGTGTTGCGGACATCTTC
ATCATCTGAAACTACTGCCGCTACGACGACGGGAGAATCTGTGGCGGTCA
CAACCGATTCTGGTGTGGTCAAAACGGTCACAATTCCCGCTGCCACAAAA
GCAACTTCAACGTCTGCAGCGGACAACCTTTCATCCGCAAAGAGTGACAA
CAACTCTGGAATGAGCTCGGGTACCATCGCTGGTGTCGTGGTAGGCTCCG
TTGGTGGTGCACTCGCCATCCTAGCCCTGATATTCGTGTTGTTCTTCGCG
AAACGCAAATCGCGGTCGAACAGCCCAGATCCAAGTACGAAAGTACCTAC
CAGTCCAATGGTCTTTGCGAGGACCACTGCAGCAACTATGCGTTTGGAAT
CCTTCAAGGGTACGACTGCTGGTGCTCGAACATTGTTCCCAATGAGGCGA
CCAACGTGAACGTTTCGCAGTGTAGCCAGGATTGTCCTGGTTACCCCGAT
GATAGCTGTGGAAGTACTTCGAAGGGCCTTTACGGTTACGTTGCGATCGT
TGGACAACAGCCGTCCGGAACAGCGACCGTCTCTACGACATCGACATCTT
CTACCTCGATGCGGGCCGACTTCCTTCTTCCACCATTGCTTGGTGTGATT
GCCTTGCTTGCTTGGCCTGTGTCGGTCGCATCCTCTCTTACCTATTGTTC
TTCGGCAAATACAGGCTCCTCGCAGGCAGCAACTCACGAACCCCGACTAA
GGCATGTTTTCCGACAATCATAGTCATACCTTGTCTGCTGGGTCCGCTGC
CAGCCGCTTGCCGACGTTTACGGACAACCGCATGAAAACCGATACCGTTC
TCTACGCGAATGGCCGCCGAGATAGCGATGTGTCACTCCAGGATAATGAA
GATTATTCTCGGCCTGTGTTGCGGACATCTTCATCATCTGAAACTACTGC
CGCTACGACGACGGGAGAATCTGTGGCGGTCACAACCGATTCTGGTGTGG
TCAAAACGGTCACAATTCCCGCTGCCACAAAAGCAACTTCAACGTCTGCA
GCGGACAACCTTTCATCCGCAAAGAGTGACAACAACTCTGGAATGAGCTC
GGGTACCATCGCTGGTGTCGTGGTAGGCTCCGTTGGTGGTGCACTCGCCA
TCCTAGCCCTGATATTCGTGTTGTTCTTCGCGAAACGCAAATCGCGGTCG
AACAGCCCAGATCCAAGTACGAAAGTACCTACCAGTCCAATGGTCTTTGC
GAGGACCACTGCAGCAACTATGCGTTTGGAATCCTTCAAGGGTACGACTG
CTGGTGCTCGAACATTGTTCCCAATGAGGCGACCAACGTGAACGTTTCGC
AGTGTAGCCAGGATTGTCCTGGTTACCCCGATGATAGCTGTGGAAGTACT
TCGAAGGGCCTTTACGGTTACGTTGCGATCGTTGGACAACAGCCGTCCGG
AACAGCGACCGTCTCTACGACATCGACATCTTCTACCTCGATGCGGGCCG
ACTTCCTTCTTCCACCATTGCTTGGTGTGATTGCCTTGCTTGCTTGGCCT
GTGTCGGTCGCATCCTCTCTTACCTATTGTTCTTCGGCAAATACAGGCTC
CTCGCAGGCAGCAACTCACGAACCCCGACTAAGGCATGTTTTCCGACAAT
CATAGTCATACCTTGTCTGCTGGGTCCGCTGCCAGCCGCTTGCCGACGTT
TACGGACAACCGCATGAAAACCGATACCGTTCTCTACGCGAATGGCCGCC
GAGATAGCGATGTGTCACTCCAGGATAATGAAGATTATTCTCGGCCTGTG
TTGCGGACATCTTCATCATCTGAAACTACTGCCGCTACGACGACGGGAGA
ATCTGTGGCGGTCACAACCGATTCTGGTGTGGTCAAAACGGTCACAATTC
CCGCTGCCACAAAAGCAACTTCAACGTCTGCAGCGGACAACCTTTCATCC
GCAAAGAGTGACAACAACTCTGGAATGAGCTCGGGTACCATCGCTGGTGT
CGTGGTAGGCTCCGTTGGTGGTGCACTCGCCATCCTAGCCCTGATATTCG
TGTTGTTCTTCGCGAAACGCAAATCGCGGTCGAACAGCCCAGATCCAAGT
ACGAAAGTACCTACCAGTCCAATGGTCTTTGCGAGGACCACTGCAGCAAC
TATGCGTTTGGAATCCTTCAAGGGTACGACTGCTGGTGCTCGAACATTGT
TCCCAATGAGGCGACCAACGTGAACGTTTCGCAGTGTAGCCAGGATTGTC
CTGGTTACCCCGATGATAGCTGTGGAAGTACTTCGAAGGGCCTTTACGGT
TACGTTGCGATCGTTGGACAACAGCCGTCCGGAACAGCGACCGTCTCTAC
GACATCGACATCTTCTACCTCGATGCGGGCCGACTTCCTTCTTCCACCAT
TGCTTGGTGTGATTGCCTTGCTTGCTTGGCCTGTGTCGGTCGCATCCTCT
CTTACCTATTGTTCTTCGGCAAATACAGGCTCCTCGCAGGCAGCAACTCA
CGAACCCCGACTAAGGCATGTTTTCCGACAATCATAGTCATACCTTGTCT
GCTGGGTCCGCTGCCAGCCGCTTGCCGACGTTTACGGACAACCGCATGAA
AACCGATACCGTTCTCTACGCGAATGGCCGCCGAGATAGCGATGTGTCAC
TCCAGGATAATGAAGATTATTCTCGGCCTGTGTTGCGGACATCTTCATCA
TCTGAAACTACTGCCGCTACGACGACGGGAGAATCTGTGGCGGTCACAAC
CGATTCTGGTGTGGTCAAAACGGTCACAATTCCCGCTGCCACAAAAGCAA
CTTCAACGTCTGCAGCGGACAACCTTTCATCCGCAAAGAGTGACAACAAC
TCTGGAATGAGCTCGGGTACCATCGCTGGTGTCGTGGTAGGCTCCGTTGG
TGGTGCACTCGCCATCCTAGCCCTGATATTCGTGTTGTTCTTCGCGAAAC
GCAAATCGCGGTCGAACAGCCCAGATCCAAGTACGAAAGTACCTACCAGT
CCAATGGTCTTTGCGAGGACCACTGCAGCAACTATGCGTTTGGAATCCTT
CAAGGGTACGACTGCTGGTGCTCGAACATTGTTCCCAATGAGGCGACCAA
CGTGAACGTTTCGCAGTGTAGCCAGGATTGTCCTGGTTACCCCGATGATA
GCTGTGGAAGTACTTCGAAGGGCCTTTACGGTTACGTTGCGATCGTTGGA
CAACAGCCGTCCGGAACAGCGACCGTCTCTACGACATCGACATCTTCTAC
CTCGATGCGGGCCGACTTCCTTCTTCCACCATTGCTTGGTGTGATTGCCT
TGCTTGCTTGGCCTGTGTCGGTCGCATCCTCTCTTACCTATTGTTCTTCG
GCAAATACAGGCTCCTCGCAGGCAGCAACTCACGAACCCCGACTAAGGCA
TGTTTTCCGACAATCATAGTCATACCTTGTCTGCTGGGTCCGCTGCCAGC
CGCTTGCCGACGTTTACGGACAACCGCATGAAAACCGATACCGTTCTCTA
CGCGAATGGCCGCCGAGATAGCGATGTGTCACTCCAGGATAATGAAGATT
ATTCTCGGCCTGTGTTGCGGACATCTTCATCATCTGAAACTACTGCCGCT
ACGACGACGGGAGAATCTGTGGCGGTCACAACCGATTCTGGTGTGGTCAA
AACGGTCACAATTCCCGCTGCCACAAAAGCAACTTCAACGTCTGCAGCGG
ACAACCTTTCATCCGCAAAGAGTGACAACAACTCTGGAATGAGCTCGGGT
ACCATCGCTGGTGTCGTGGTAGGCTCCGTTGGTGGTGCACTCGCCATCCT
AGCCCTGATATTCGTGTTGTTCTTCGCGAAACGCAAATCGCGGTCGAACA
GCCCAGATCCAAGTACGAAAGTACCTACCAGTCCAATGGTCTTTGCGAGG
ACCACTGCAGCAACTATGCGTTTGGAATCCTTCAAGGGTACGACTGCTGG
TGCTCGAACATTGTTCCCAATGAGGCGACCAACGTGAACGTTTCGCAGTG
TAGCCAGGATTGTCCTGGTTACCCCGATGATAGCTGTGGAAGTACTTCGA
AGGGCCTTTACGGTTACGTTGCGATCGTTGGACAACAGCCGTCCGGAACA
GCGACCGTCTCTACGACATCGACATCTTCTACCTCGATGCGGGCCGACTT
CCTTCTTCCACCATTGCTTGGTGTGATTGCCTTGCTTGCTTGGCCTGTGT
CGGTCGCATCCTCTCTTACCTATTGTTCTTCGGCAAATACAGGCTCCTCG
CAGGCAGCAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004858-T1.utr3p1 | KJC3_004858-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-24) |
| DBxref | InterPro:IPR002889 |
| DBxref | PFAM:PF01822 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:915866..918456 - |
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