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KJC3_004869-T1, KJC3_004869-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004869-T1
Unique NameKJC3_004869-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:949381..950959-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004869-T1 ID=KJC3_004869-T1|Name=KJC3_004869-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1579bp|location=Sequence derived from alignment at ch4:949381..950959- (Aspergillus niger KJC3)
GTGTAATTTAGAGCTGCCATCCCCACTCAATACCTCAGATTAGAGATAAT
ATCGGCACAACCCTCTTTATCAGAAGCCCAAAAACTGGAAACGGAGGTTA
CCAGCCATCATGGCTTCTCCGCTTCACCGACATTGCTCATCCTTGGATGA
AGTCATCTTTCCCGACCAGCAATGCTTGACACCAGAAGAGCATGATAAAG
CCACGAAGCTTTTTGACAAGCTAATTGAACGTTTCGAGCCTTTACAGACA
TCGAACAAAGATTATAGACCACTAACACTTATACGCCTCACGAAAGAGGA
GGTCTCTGCTGAAGATGAGTTCCTGATCCTCTTCTTCACTCTCATCGAAC
ACGATCATCTTGGAGTCACAACAGCAATCAGAGTAGCTGAGGTCCTAGGA
AGGTTACGCACTTTTGAGAGATGGACTTCCGAAGAGCAAAACATCCTTCT
TCAATGTTTAGTCCACTTCGCCGATTATCTGATAGATAATTTCTTCTTAC
CACGTATGTTGCTGACATATCTAGTCATCGCAGGATACTGACTCTATATT
TAGTTAAACTAACAGCCGCGAAGGCTACTCAACCTACGATGATAGATTCA
TTAGAACCAACTATTGGCACTCCACAGCACATCCCTGATCTACGACAAGC
CTGTCTCACGCGTGACCGCCATCGATGTGTCGTGACCCGAAAGTTCGATA
TTCGGGAGGCTGAAAAGAGATGCAAGGTACTAGATGGAGATAACGTGAAA
GACGATGACGGGAATCCTTTGCTGCAGGAAGCTAAAGGCATGACCTATCT
CGAAGTAGCGTATATCATTCCTCATTCTCTCATGTCTCATAGTGACATAC
ATATTGCTGGAGAATCGAAATTAGTACGTTATCACTTAAGCTTGTAGCAT
TCTGCTAATTAATCCTCTAGGCTACTCACAAGATCCTAATGATGTTCGAC
CCAAAAACTATTTCCCTCATCAACAAAACCAACATTAACCAACAACTTCT
AAACACGCTAACCTTAACTCACGACCTTCATCACTCATTTCGTGCTTTCG
AGATCACTTTTGAACAAGTCCAGGATCATCCACACACATACACAATCAAC
TATATCGACCCAAACCGCATGTTCCGAATCCATAGACTTCCTATCACCCG
CACGCTCTATGCCACCCCCAACGGAAGTATAGAACCACCATCCCCTCAAC
TTCTGAAAGTCCATCATTCTATCGGGCGCATTCTTCACTTCAGTGCTGCC
GGCGAATATCTCGATAAATTCATCCAAGACATGGAAGAAATGGAAGAAGG
AGGGGGAATCTGCTCGAATGGGTCTACTCGCGTTGATGATTATGTTCGGT
ATAAACTTACAACAATTGGACTTTAAATAGATGCGTGGCTTTTGACTACA
GTGCTTGTGTGTTTGATAGCAGGGGGGTCTTGGCTAGATCAATAGTAGTC
AGAGCAGCGCTTCTGGGTGTTATAGTGTATGCTTGGGTTCTGAAGAGCCC
GGCTACTTAGTTTTGAGAAAGGACTTTGGATTTAGGGATACGCGACTGGA
TACTTAATTTCGGCGTATGGAAAGGCTGG
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Coding sequence (CDS) from alignment at ch4:949381..950959-

>KJC3_004869-T1 ID=KJC3_004869-T1|Name=KJC3_004869-T1|organism=Aspergillus niger KJC3|type=CDS|length=3510bp|location=Sequence derived from alignment at ch4:949381..950959- (Aspergillus niger KJC3)
GCTACTCACAAGATCCTAATGATGTTCGACCCAAAAACTATTTCCCTCAT
CAACAAAACCAACATTAACCAACAACTTCTAAACACGCTAACCTTAACTC
ACGACCTTCATCACTCATTTCGTGCTTTCGAGATCACTTTTGAACAAGTC
CAGGATCATCCACACACATACACAATCAACTATATCGACCCAAACCGCAT
GTTCCGAATCCATAGACTTCCTATCACCCGCACGCTCTATGCCACCCCCA
ACGGAAGTATAGAACCACCATCCCCTCAACTTCTGAAAGTCCATCATTCT
ATCGGGCGCATTCTTCACTTCAGTGCTGCCGGCGAATATCTCGATAAATT
CATCCAAGACATGGAAGAAATGGAAGAAGGAGGGGGAATCTGCTCGAATG
GGTCTACTCGCGTTGATGATTATGTTCGGTATAAACTTACAACAATTGGA
CTTTAATTAAACTAACAGCCGCGAAGGCTACTCAACCTACGATGATAGAT
TCATTAGAACCAACTATTGGCACTCCACAGCACATCCCTGATCTACGACA
AGCCTGTCTCACGCGTGACCGCCATCGATGTGTCGTGACCCGAAAGTTCG
ATATTCGGGAGGCTGAAAAGAGATGCAAGGTACTAGATGGAGATAACGTG
AAAGACGATGACGGGAATCCTTTGCTGCAGGAAGCTAAAGGCATGACCTA
TCTCGAAGTAGCGTATATCATTCCTCATTCTCTCATGTCTCATAGTGACA
TACATATTGCTGGAGAATCGAAATTAATGGCTTCTCCGCTTCACCGACAT
TGCTCATCCTTGGATGAAGTCATCTTTCCCGACCAGCAATGCTTGACACC
AGAAGAGCATGATAAAGCCACGAAGCTTTTTGACAAGCTAATTGAACGTT
TCGAGCCTTTACAGACATCGAACAAAGATTATAGACCACTAACACTTATA
CGCCTCACGAAAGAGGAGGTCTCTGCTGAAGATGAGTTCCTGATCCTCTT
CTTCACTCTCATCGAACACGATCATCTTGGAGTCACAACAGCAATCAGAG
TAGCTGAGGTCCTAGGAAGGTTACGCACTTTTGAGAGATGGACTTCCGAA
GAGCAAAACATCCTTCTTCAATGTTTAGTCCACTTCGCCGATTATCTGAT
AGATAATTTCTTCTTACCACGCTACTCACAAGATCCTAATGATGTTCGAC
CCAAAAACTATTTCCCTCATCAACAAAACCAACATTAACCAACAACTTCT
AAACACGCTAACCTTAACTCACGACCTTCATCACTCATTTCGTGCTTTCG
AGATCACTTTTGAACAAGTCCAGGATCATCCACACACATACACAATCAAC
TATATCGACCCAAACCGCATGTTCCGAATCCATAGACTTCCTATCACCCG
CACGCTCTATGCCACCCCCAACGGAAGTATAGAACCACCATCCCCTCAAC
TTCTGAAAGTCCATCATTCTATCGGGCGCATTCTTCACTTCAGTGCTGCC
GGCGAATATCTCGATAAATTCATCCAAGACATGGAAGAAATGGAAGAAGG
AGGGGGAATCTGCTCGAATGGGTCTACTCGCGTTGATGATTATGTTCGGT
ATAAACTTACAACAATTGGACTTTAATTAAACTAACAGCCGCGAAGGCTA
CTCAACCTACGATGATAGATTCATTAGAACCAACTATTGGCACTCCACAG
CACATCCCTGATCTACGACAAGCCTGTCTCACGCGTGACCGCCATCGATG
TGTCGTGACCCGAAAGTTCGATATTCGGGAGGCTGAAAAGAGATGCAAGG
TACTAGATGGAGATAACGTGAAAGACGATGACGGGAATCCTTTGCTGCAG
GAAGCTAAAGGCATGACCTATCTCGAAGTAGCGTATATCATTCCTCATTC
TCTCATGTCTCATAGTGACATACATATTGCTGGAGAATCGAAATTAATGG
CTTCTCCGCTTCACCGACATTGCTCATCCTTGGATGAAGTCATCTTTCCC
GACCAGCAATGCTTGACACCAGAAGAGCATGATAAAGCCACGAAGCTTTT
TGACAAGCTAATTGAACGTTTCGAGCCTTTACAGACATCGAACAAAGATT
ATAGACCACTAACACTTATACGCCTCACGAAAGAGGAGGTCTCTGCTGAA
GATGAGTTCCTGATCCTCTTCTTCACTCTCATCGAACACGATCATCTTGG
AGTCACAACAGCAATCAGAGTAGCTGAGGTCCTAGGAAGGTTACGCACTT
TTGAGAGATGGACTTCCGAAGAGCAAAACATCCTTCTTCAATGTTTAGTC
CACTTCGCCGATTATCTGATAGATAATTTCTTCTTACCACGCTACTCACA
AGATCCTAATGATGTTCGACCCAAAAACTATTTCCCTCATCAACAAAACC
AACATTAACCAACAACTTCTAAACACGCTAACCTTAACTCACGACCTTCA
TCACTCATTTCGTGCTTTCGAGATCACTTTTGAACAAGTCCAGGATCATC
CACACACATACACAATCAACTATATCGACCCAAACCGCATGTTCCGAATC
CATAGACTTCCTATCACCCGCACGCTCTATGCCACCCCCAACGGAAGTAT
AGAACCACCATCCCCTCAACTTCTGAAAGTCCATCATTCTATCGGGCGCA
TTCTTCACTTCAGTGCTGCCGGCGAATATCTCGATAAATTCATCCAAGAC
ATGGAAGAAATGGAAGAAGGAGGGGGAATCTGCTCGAATGGGTCTACTCG
CGTTGATGATTATGTTCGGTATAAACTTACAACAATTGGACTTTAATTAA
ACTAACAGCCGCGAAGGCTACTCAACCTACGATGATAGATTCATTAGAAC
CAACTATTGGCACTCCACAGCACATCCCTGATCTACGACAAGCCTGTCTC
ACGCGTGACCGCCATCGATGTGTCGTGACCCGAAAGTTCGATATTCGGGA
GGCTGAAAAGAGATGCAAGGTACTAGATGGAGATAACGTGAAAGACGATG
ACGGGAATCCTTTGCTGCAGGAAGCTAAAGGCATGACCTATCTCGAAGTA
GCGTATATCATTCCTCATTCTCTCATGTCTCATAGTGACATACATATTGC
TGGAGAATCGAAATTAATGGCTTCTCCGCTTCACCGACATTGCTCATCCT
TGGATGAAGTCATCTTTCCCGACCAGCAATGCTTGACACCAGAAGAGCAT
GATAAAGCCACGAAGCTTTTTGACAAGCTAATTGAACGTTTCGAGCCTTT
ACAGACATCGAACAAAGATTATAGACCACTAACACTTATACGCCTCACGA
AAGAGGAGGTCTCTGCTGAAGATGAGTTCCTGATCCTCTTCTTCACTCTC
ATCGAACACGATCATCTTGGAGTCACAACAGCAATCAGAGTAGCTGAGGT
CCTAGGAAGGTTACGCACTTTTGAGAGATGGACTTCCGAAGAGCAAAACA
TCCTTCTTCAATGTTTAGTCCACTTCGCCGATTATCTGATAGATAATTTC
TTCTTACCAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004869KJC3_004869Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004869-T1KJC3_004869-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004869-T1.cdsKJC3_004869-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004869-T1.utr3p1KJC3_004869-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004869-T1.exon3KJC3_004869-T1.exon3Aspergillus niger KJC3exon
KJC3_004869-T1.exon2KJC3_004869-T1.exon2Aspergillus niger KJC3exon
KJC3_004869-T1.exon1KJC3_004869-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004869-T1.utr5p1KJC3_004869-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003615
DBxrefPFAM:PF13391
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:949381..950959 -
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