You are here

KJC3_004873-T1, KJC3_004873-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004873-T1
Unique NameKJC3_004873-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:958066..959116-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004873-T1 ID=KJC3_004873-T1|Name=KJC3_004873-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1051bp|location=Sequence derived from alignment at ch4:958066..959116- (Aspergillus niger KJC3)
ATGTCCGACGACGAAGACTTCTATGATGAATACGACGAAGACATTTTCTG GGTAGAAGAACCCGACCCAACTGTCGCTGTATGTCCCCACCCACCCCCTT ATTCATCGACCTATTTTACGTGTGTCCCACCCAATTTCTGTAAGAACCCT GAAATTCTAACACAGCAACACACTACTGTAGGACGATCTCGCCGCGACAG CAACGGCAACAAATGACTTGATCTTCTATGACGATCCGGCCCTTGAAGCT GAAGAATTCTTCAGCGACTGGGACGATCTCTCCGACGATTACTACGACCA AGACCCGACCGCAGTCCGACGCCAACGTGCTCTCAACGCCCTTCTAGCCC AAAAGACCATCTCAGCGGGTATTCCGCCCACGAAACGCAGCTGGAAGCAC CCCTCCAAGGGTCTGTTCGATGTCGCAGCATTTCAGGGTGTAGTGTGGAA AAGTCCCGCCGACGACTTGAAAATTGCGCTGCATGAGCCAGGTGAGGGAG AGAAGGTCGCGCTGTTAAAGAATTGGCGGGAGGTGTTCCGGAATTCGAAT CCCGCGATTGGAAGAGCTAGGGTCAGAAAAGAGACTGCGGGACGGAGAGG AATTGGTTCACCGGAAGTGGTGGATTTGTATGGTGCTGAGGATGTGGAGG CAGATGACGGGGAGGACGCAGATATTGAGGATGGGGTGGAGGTGGAGATG TCAAATGGACAGGACAATGGTGCGCTGAATGACGTGCCTGCTGCTGGCGG TGACACGGACATGGTTGAGACTGAAAATACGGAAGGTACTCAGGACCTTC CCGATGGTATAAAGCCGTCTGACTCTCTTGAGGTGCCCAAGTCGAAACCA AACGGTGTCGCTGCTGCATCAGCAGACAAGCCAGCAACAAGAGGCCGGAA GCGCAAGGCTGAAGAAGAAAGCGAACCTGTCCCTGAAGCAACCAGTAAGG CGAGATCGAAACGCGTCGCAACACAGAAAGTCGGCGAGGCGAAGGTTTCT AACCCCGCGCCTTCGGGTCCAGTGCGGAGGTCGGCCAGAAACAAGAAGTA A
back to top

Coding sequence (CDS) from alignment at ch4:958066..959116-

>KJC3_004873-T1 ID=KJC3_004873-T1|Name=KJC3_004873-T1|organism=Aspergillus niger KJC3|type=CDS|length=1896bp|location=Sequence derived from alignment at ch4:958066..959116- (Aspergillus niger KJC3)
GACGATCTCGCCGCGACAGCAACGGCAACAAATGACTTGATCTTCTATGA
CGATCCGGCCCTTGAAGCTGAAGAATTCTTCAGCGACTGGGACGATCTCT
CCGACGATTACTACGACCAAGACCCGACCGCAGTCCGACGCCAACGTGCT
CTCAACGCCCTTCTAGCCCAAAAGACCATCTCAGCGGGTATTCCGCCCAC
GAAACGCAGCTGGAAGCACCCCTCCAAGGGTCTGTTCGATGTCGCAGCAT
TTCAGGGTGTAGTGTGGAAAAGTCCCGCCGACGACTTGAAAATTGCGCTG
CATGAGCCAGGTGAGGGAGAGAAGGTCGCGCTGTTAAAGAATTGGCGGGA
GGTGTTCCGGAATTCGAATCCCGCGATTGGAAGAGCTAGGGTCAGAAAAG
AGACTGCGGGACGGAGAGGAATTGGTTCACCGGAAGTGGTGGATTTGTAT
GGTGCTGAGGATGTGGAGGCAGATGACGGGGAGGACGCAGATATTGAGGA
TGGGGTGGAGGTGGAGATGTCAAATGGACAGGACAATGGTGCGCTGAATG
ACGTGCCTGCTGCTGGCGGTGACACGGACATGGTTGAGACTGAAAATACG
GAAGGTACTCAGGACCTTCCCGATGGTATAAAGCCGTCTGACTCTCTTGA
GGTGCCCAAGTCGAAACCAAACGGTGTCGCTGCTGCATCAGCAGACAAGC
CAGCAACAAGAGGCCGGAAGCGCAAGGCTGAAGAAGAAAGCGAACCTGTC
CCTGAAGCAACCAGTAAGGCGAGATCGAAACGCGTCGCAACACAGAAAGT
CGGCGAGGCGAAGGTTTCTAACCCCGCGCCTTCGGGTCCAGTGCGGAGGT
CGGCCAGAAACAAGAAGTAAATGTCCGACGACGAAGACTTCTATGATGAA
TACGACGAAGACATTTTCTGGGTAGAAGAACCCGACCCAACTGTCGCTGA
CGATCTCGCCGCGACAGCAACGGCAACAAATGACTTGATCTTCTATGACG
ATCCGGCCCTTGAAGCTGAAGAATTCTTCAGCGACTGGGACGATCTCTCC
GACGATTACTACGACCAAGACCCGACCGCAGTCCGACGCCAACGTGCTCT
CAACGCCCTTCTAGCCCAAAAGACCATCTCAGCGGGTATTCCGCCCACGA
AACGCAGCTGGAAGCACCCCTCCAAGGGTCTGTTCGATGTCGCAGCATTT
CAGGGTGTAGTGTGGAAAAGTCCCGCCGACGACTTGAAAATTGCGCTGCA
TGAGCCAGGTGAGGGAGAGAAGGTCGCGCTGTTAAAGAATTGGCGGGAGG
TGTTCCGGAATTCGAATCCCGCGATTGGAAGAGCTAGGGTCAGAAAAGAG
ACTGCGGGACGGAGAGGAATTGGTTCACCGGAAGTGGTGGATTTGTATGG
TGCTGAGGATGTGGAGGCAGATGACGGGGAGGACGCAGATATTGAGGATG
GGGTGGAGGTGGAGATGTCAAATGGACAGGACAATGGTGCGCTGAATGAC
GTGCCTGCTGCTGGCGGTGACACGGACATGGTTGAGACTGAAAATACGGA
AGGTACTCAGGACCTTCCCGATGGTATAAAGCCGTCTGACTCTCTTGAGG
TGCCCAAGTCGAAACCAAACGGTGTCGCTGCTGCATCAGCAGACAAGCCA
GCAACAAGAGGCCGGAAGCGCAAGGCTGAAGAAGAAAGCGAACCTGTCCC
TGAAGCAACCAGTAAGGCGAGATCGAAACGCGTCGCAACACAGAAAGTCG
GCGAGGCGAAGGTTTCTAACCCCGCGCCTTCGGGTCCAGTGCGGAGGTCG
GCCAGAAACAAGAAGTAAATGTCCGACGACGAAGACTTCTATGATGAATA
CGACGAAGACATTTTCTGGGTAGAAGAACCCGACCCAACTGTCGCT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004873KJC3_004873Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004873-T1KJC3_004873-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004873-T1.cdsKJC3_004873-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004873-T1.exon2KJC3_004873-T1.exon2Aspergillus niger KJC3exon
KJC3_004873-T1.exon1KJC3_004873-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:958066..959116 -