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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:986825..989091+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004881-T1 ID=KJC3_004881-T1|Name=KJC3_004881-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2267bp|location=Sequence derived from alignment at ch4:986825..989091+ (Aspergillus niger KJC3)
ACTGAAGCGACTTCATGATGCTATATCGGCAATATTTGTTCTACATAGAT
CAACTGGGCAAAATGTGCATCCATCTCTTGGTAGATAAGGCAGACGGGCC
GATGCGAGCCTGAAGTTTCTGGATGATGAGCCGTGGATACCCCCTCAACG
CTACCACTTTTTCTACCAGATTGTGGAGATCAGCCTGCTACAGCATCGCG
AGCTGTGGACTCTTCAAATAACTGCAAAAGAGAGCCTCTGGGTACGTTGT
TCACGGGATGTTTATTCTCCAGACATGGAGTGAGCTCGGCTTCGGCATTT
CCAGCCCCGCAAACTAGGGCCATCCGGTGAGCTATTTGGCGGCTTATCCC
TTTCCCTGAAGGAGAGAGGCGTTATATCATTTAGCCTCTTCACGAGGGGT
CAAATTTTCTTGGCCGTCTGTCAAATTGCTTTGCCGCGCAACTGAGGGGC
TACCATGGTCCTCATCAAAAGGTATAAAAGCAGTGATCTTTTCGCCCCTC
GTCTAAGATGAGCAATCGCCCCACTCATACTCAACTTCAAGATGCTTTTG
CGTCTCTGCGTCATTGCAACCCTTTTTGTCACCCAAGGCGTAGCTGTTCC
CGCTTCTCCAGCTACAAGAGACACAAATGGAGAAGGACTCCTAGTCCAAA
CCTCCAGCGGCCCTATACAAGGCTTCTTCAATCAGACAGCTCCTGATGTT
CGACAATTCCTTGGTGTTCCATTTGCAGAGCCACCAGTTGGTGACCTCCG
CTTTAGCAGTCCCGTGAAGAAACAGCCTAATGGTACCGTCAATGCTTTTG
CACTGCCCTCATCATGTATCCAGCAGACAAGCAATAGCTCTACAATCTAC
ACCACCTATGAAACGGGGTTTCTCATCAGTGGAGGGGACTCAGAGGACTG
TCTATACCTGTCAATCTGGGCACCTCGTATTGAGAACATTCAATCTCAAC
AGCGTCCGCTGCCAGTGCTGCTTTACATCCCCGGAGGTGGGTTCACGAGT
GGAGGGGAAGCGTCGCTGTACAAGATCCCCGACAAATGGGTGCAACGGAC
GCAGTCCCACATCGTGGTGATCATGAAGTGAGTCTTCACTCTATCAAGCT
GGCCTATGTTACTAATCTGACACCAAACTAGCTATCGCGTCAATGTGTTT
GGCTTCCCTAACGCGGAAGGGCTGTCCGAGCAGAATGTCGGCTTCCTCGA
CCAAAGAATGGCGTAAGTCAACCTCTTCAACAAACCCACATAAACCCCAA
ACTAACCACTACACCTCCAGCATTGAATGGGTAGCAGCCAACATCGCTAA
CTTCGGCGGTGACCCCGCGCGAATCGCCCTGTGGGGTCAATCCGCCGGAG
CAGGCAGCGTGACAGCCTACTCATACGGATATCCTGAAGACCCCATTGTC
GCCGCTCTCATAGCCGACTCAGGTGCCCCAGGTATAATCGACAACGACGA
CTACGCACACACCAACTTCACATTCCTAGCCAGTCTCGTAGGCTGCGATG
GACTATCATCCACCGAAGAACTCAGCTGCATGCGGAACGTATCCGCCCGA
AAGCTACAAACCGCTCTCTCAACATACTCCGGCTCGCCATCCATATCATT
CAAGCCAGCCATCGATAACAAGACCGCTTTCGCGAACTGGACCCAGCGTG
CAGTCGAAGGCAAAATTGCCAAAATCGTAAGCAACTCCAGTACCCTTGAC
AATTACCTCCAGCTAACCTACCTTCCTTCAGCCCTTAATAACAGGAAGCA
ACACCAACGAAGGCGCCGGTTTCGTCTCATTCACCCCAACCGGACCCGGC
AAATCCACACTTTTCAACATAACCGAATCAATCATTGCCTGCCCCGTCGC
AGACGAAGTCAAGAACCGCAACCTCGCAAACCTCACCACCTACAGGTACC
AATACGCAGGCAACTTCTCCAACATCTCCCCGCTGCCTTGGTTCGGAGCC
TATCATAGCTCAGAGCTCCCTCTTCTCTTTGGTACGCATTATGAGTATGG
TGGGCCCTCTACGCAGTATGAGTGGGACGTGAGTTACGCGATGGAAGCGC
TGTGGCTTTCATTTGCGGAGGATCCGTCGCGGGGGCCAGTGCGGCTAGCT
GTTGGGAATGCGGCAGCAAATCCGAATAACGGGAGTTATTTTGCTTGGCC
TGCTTTTGAGCAGGGGTCGGATAATTTGTTGGTTTTTGCAGAAGGGGAGA
CGATGATGCAGTTGGTTGGGGCGGGGAGGATTGATGATTATTGTTGATCT
GTCAGAATATATTCGTG back to topCoding sequence (CDS) from alignment at ch4:986825..989091+ >KJC3_004881-T1 ID=KJC3_004881-T1|Name=KJC3_004881-T1|organism=Aspergillus niger KJC3|type=CDS|length=6156bp|location=Sequence derived from alignment at ch4:986825..989091+ (Aspergillus niger KJC3)
ATGCTTTTGCGTCTCTGCGTCATTGCAACCCTTTTTGTCACCCAAGGCGT
AGCTGTTCCCGCTTCTCCAGCTACAAGAGACACAAATGGAGAAGGACTCC
TAGTCCAAACCTCCAGCGGCCCTATACAAGGCTTCTTCAATCAGACAGCT
CCTGATGTTCGACAATTCCTTGGTGTTCCATTTGCAGAGCCACCAGTTGG
TGACCTCCGCTTTAGCAGTCCCGTGAAGAAACAGCCTAATGGTACCGTCA
ATGCTTTTGCACTGCCCTCATCATGTATCCAGCAGACAAGCAATAGCTCT
ACAATCTACACCACCTATGAAACGGGGTTTCTCATCAGTGGAGGGGACTC
AGAGGACTGTCTATACCTGTCAATCTGGGCACCTCGTATTGAGAACATTC
AATCTCAACAGCGTCCGCTGCCAGTGCTGCTTTACATCCCCGGAGGTGGG
TTCACGAGTGGAGGGGAAGCGTCGCTGTACAAGATCCCCGACAAATGGGT
GCAACGGACGCAGTCCCACATCGTGGTGATCATGAACTATCGCGTCAATG
TGTTTGGCTTCCCTAACGCGGAAGGGCTGTCCGAGCAGAATGTCGGCTTC
CTCGACCAAAGAATGGCCATTGAATGGGTAGCAGCCAACATCGCTAACTT
CGGCGGTGACCCCGCGCGAATCGCCCTGTGGGGTCAATCCGCCGGAGCAG
GCAGCGTGACAGCCTACTCATACGGATATCCTGAAGACCCCATTGTCGCC
GCTCTCATAGCCGACTCAGGTGCCCCAGGTATAATCGACAACGACGACTA
CGCACACACCAACTTCACATTCCTAGCCAGTCTCGTAGGCTGCGATGGAC
TATCATCCACCGAAGAACTCAGCTGCATGCGGAACGTATCCGCCCGAAAG
CTACAAACCGCTCTCTCAACATACTCCGGCTCGCCATCCATATCATTCAA
GCCAGCCATCGATAACAAGACCGCTTTCGCGAACTGGACCCAGCGTGCAG
TCGAAGGCAAAATTGCCAAAATCCCCTTAATAACAGGAAGCAACACCAAC
GAAGGCGCCGGTTTCGTCTCATTCACCCCAACCGGACCCGGCAAATCCAC
ACTTTTCAACATAACCGAATCAATCATTGCCTGCCCCGTCGCAGACGAAG
TCAAGAACCGCAACCTCGCAAACCTCACCACCTACAGGTACCAATACGCA
GGCAACTTCTCCAACATCTCCCCGCTGCCTTGGTTCGGAGCCTATCATAG
CTCAGAGCTCCCTCTTCTCTTTGGTACGCATTATGAGTATGGTGGGCCCT
CTACGCAGTATGAGTGGGACGTGAGTTACGCGATGGAAGCGCTGTGGCTT
TCATTTGCGGAGGATCCGTCGCGGGGGCCAGTGCGGCTAGCTGTTGGGAA
TGCGGCAGCAAATCCGAATAACGGGAGTTATTTTGCTTGGCCTGCTTTTG
AGCAGGGGTCGGATAATTTGTTGGTTTTTGCAGAAGGGGAGACGATGATG
CAGTTGGTTGGGGCGGGGAGGATTGATGATTATTGTTGAATGCTTTTGCG
TCTCTGCGTCATTGCAACCCTTTTTGTCACCCAAGGCGTAGCTGTTCCCG
CTTCTCCAGCTACAAGAGACACAAATGGAGAAGGACTCCTAGTCCAAACC
TCCAGCGGCCCTATACAAGGCTTCTTCAATCAGACAGCTCCTGATGTTCG
ACAATTCCTTGGTGTTCCATTTGCAGAGCCACCAGTTGGTGACCTCCGCT
TTAGCAGTCCCGTGAAGAAACAGCCTAATGGTACCGTCAATGCTTTTGCA
CTGCCCTCATCATGTATCCAGCAGACAAGCAATAGCTCTACAATCTACAC
CACCTATGAAACGGGGTTTCTCATCAGTGGAGGGGACTCAGAGGACTGTC
TATACCTGTCAATCTGGGCACCTCGTATTGAGAACATTCAATCTCAACAG
CGTCCGCTGCCAGTGCTGCTTTACATCCCCGGAGGTGGGTTCACGAGTGG
AGGGGAAGCGTCGCTGTACAAGATCCCCGACAAATGGGTGCAACGGACGC
AGTCCCACATCGTGGTGATCATGAACTATCGCGTCAATGTGTTTGGCTTC
CCTAACGCGGAAGGGCTGTCCGAGCAGAATGTCGGCTTCCTCGACCAAAG
AATGGCCATTGAATGGGTAGCAGCCAACATCGCTAACTTCGGCGGTGACC
CCGCGCGAATCGCCCTGTGGGGTCAATCCGCCGGAGCAGGCAGCGTGACA
GCCTACTCATACGGATATCCTGAAGACCCCATTGTCGCCGCTCTCATAGC
CGACTCAGGTGCCCCAGGTATAATCGACAACGACGACTACGCACACACCA
ACTTCACATTCCTAGCCAGTCTCGTAGGCTGCGATGGACTATCATCCACC
GAAGAACTCAGCTGCATGCGGAACGTATCCGCCCGAAAGCTACAAACCGC
TCTCTCAACATACTCCGGCTCGCCATCCATATCATTCAAGCCAGCCATCG
ATAACAAGACCGCTTTCGCGAACTGGACCCAGCGTGCAGTCGAAGGCAAA
ATTGCCAAAATCCCCTTAATAACAGGAAGCAACACCAACGAAGGCGCCGG
TTTCGTCTCATTCACCCCAACCGGACCCGGCAAATCCACACTTTTCAACA
TAACCGAATCAATCATTGCCTGCCCCGTCGCAGACGAAGTCAAGAACCGC
AACCTCGCAAACCTCACCACCTACAGGTACCAATACGCAGGCAACTTCTC
CAACATCTCCCCGCTGCCTTGGTTCGGAGCCTATCATAGCTCAGAGCTCC
CTCTTCTCTTTGGTACGCATTATGAGTATGGTGGGCCCTCTACGCAGTAT
GAGTGGGACGTGAGTTACGCGATGGAAGCGCTGTGGCTTTCATTTGCGGA
GGATCCGTCGCGGGGGCCAGTGCGGCTAGCTGTTGGGAATGCGGCAGCAA
ATCCGAATAACGGGAGTTATTTTGCTTGGCCTGCTTTTGAGCAGGGGTCG
GATAATTTGTTGGTTTTTGCAGAAGGGGAGACGATGATGCAGTTGGTTGG
GGCGGGGAGGATTGATGATTATTGTTGAATGCTTTTGCGTCTCTGCGTCA
TTGCAACCCTTTTTGTCACCCAAGGCGTAGCTGTTCCCGCTTCTCCAGCT
ACAAGAGACACAAATGGAGAAGGACTCCTAGTCCAAACCTCCAGCGGCCC
TATACAAGGCTTCTTCAATCAGACAGCTCCTGATGTTCGACAATTCCTTG
GTGTTCCATTTGCAGAGCCACCAGTTGGTGACCTCCGCTTTAGCAGTCCC
GTGAAGAAACAGCCTAATGGTACCGTCAATGCTTTTGCACTGCCCTCATC
ATGTATCCAGCAGACAAGCAATAGCTCTACAATCTACACCACCTATGAAA
CGGGGTTTCTCATCAGTGGAGGGGACTCAGAGGACTGTCTATACCTGTCA
ATCTGGGCACCTCGTATTGAGAACATTCAATCTCAACAGCGTCCGCTGCC
AGTGCTGCTTTACATCCCCGGAGGTGGGTTCACGAGTGGAGGGGAAGCGT
CGCTGTACAAGATCCCCGACAAATGGGTGCAACGGACGCAGTCCCACATC
GTGGTGATCATGAACTATCGCGTCAATGTGTTTGGCTTCCCTAACGCGGA
AGGGCTGTCCGAGCAGAATGTCGGCTTCCTCGACCAAAGAATGGCCATTG
AATGGGTAGCAGCCAACATCGCTAACTTCGGCGGTGACCCCGCGCGAATC
GCCCTGTGGGGTCAATCCGCCGGAGCAGGCAGCGTGACAGCCTACTCATA
CGGATATCCTGAAGACCCCATTGTCGCCGCTCTCATAGCCGACTCAGGTG
CCCCAGGTATAATCGACAACGACGACTACGCACACACCAACTTCACATTC
CTAGCCAGTCTCGTAGGCTGCGATGGACTATCATCCACCGAAGAACTCAG
CTGCATGCGGAACGTATCCGCCCGAAAGCTACAAACCGCTCTCTCAACAT
ACTCCGGCTCGCCATCCATATCATTCAAGCCAGCCATCGATAACAAGACC
GCTTTCGCGAACTGGACCCAGCGTGCAGTCGAAGGCAAAATTGCCAAAAT
CCCCTTAATAACAGGAAGCAACACCAACGAAGGCGCCGGTTTCGTCTCAT
TCACCCCAACCGGACCCGGCAAATCCACACTTTTCAACATAACCGAATCA
ATCATTGCCTGCCCCGTCGCAGACGAAGTCAAGAACCGCAACCTCGCAAA
CCTCACCACCTACAGGTACCAATACGCAGGCAACTTCTCCAACATCTCCC
CGCTGCCTTGGTTCGGAGCCTATCATAGCTCAGAGCTCCCTCTTCTCTTT
GGTACGCATTATGAGTATGGTGGGCCCTCTACGCAGTATGAGTGGGACGT
GAGTTACGCGATGGAAGCGCTGTGGCTTTCATTTGCGGAGGATCCGTCGC
GGGGGCCAGTGCGGCTAGCTGTTGGGAATGCGGCAGCAAATCCGAATAAC
GGGAGTTATTTTGCTTGGCCTGCTTTTGAGCAGGGGTCGGATAATTTGTT
GGTTTTTGCAGAAGGGGAGACGATGATGCAGTTGGTTGGGGCGGGGAGGA
TTGATGATTATTGTTGAATGCTTTTGCGTCTCTGCGTCATTGCAACCCTT
TTTGTCACCCAAGGCGTAGCTGTTCCCGCTTCTCCAGCTACAAGAGACAC
AAATGGAGAAGGACTCCTAGTCCAAACCTCCAGCGGCCCTATACAAGGCT
TCTTCAATCAGACAGCTCCTGATGTTCGACAATTCCTTGGTGTTCCATTT
GCAGAGCCACCAGTTGGTGACCTCCGCTTTAGCAGTCCCGTGAAGAAACA
GCCTAATGGTACCGTCAATGCTTTTGCACTGCCCTCATCATGTATCCAGC
AGACAAGCAATAGCTCTACAATCTACACCACCTATGAAACGGGGTTTCTC
ATCAGTGGAGGGGACTCAGAGGACTGTCTATACCTGTCAATCTGGGCACC
TCGTATTGAGAACATTCAATCTCAACAGCGTCCGCTGCCAGTGCTGCTTT
ACATCCCCGGAGGTGGGTTCACGAGTGGAGGGGAAGCGTCGCTGTACAAG
ATCCCCGACAAATGGGTGCAACGGACGCAGTCCCACATCGTGGTGATCAT
GAACTATCGCGTCAATGTGTTTGGCTTCCCTAACGCGGAAGGGCTGTCCG
AGCAGAATGTCGGCTTCCTCGACCAAAGAATGGCCATTGAATGGGTAGCA
GCCAACATCGCTAACTTCGGCGGTGACCCCGCGCGAATCGCCCTGTGGGG
TCAATCCGCCGGAGCAGGCAGCGTGACAGCCTACTCATACGGATATCCTG
AAGACCCCATTGTCGCCGCTCTCATAGCCGACTCAGGTGCCCCAGGTATA
ATCGACAACGACGACTACGCACACACCAACTTCACATTCCTAGCCAGTCT
CGTAGGCTGCGATGGACTATCATCCACCGAAGAACTCAGCTGCATGCGGA
ACGTATCCGCCCGAAAGCTACAAACCGCTCTCTCAACATACTCCGGCTCG
CCATCCATATCATTCAAGCCAGCCATCGATAACAAGACCGCTTTCGCGAA
CTGGACCCAGCGTGCAGTCGAAGGCAAAATTGCCAAAATCCCCTTAATAA
CAGGAAGCAACACCAACGAAGGCGCCGGTTTCGTCTCATTCACCCCAACC
GGACCCGGCAAATCCACACTTTTCAACATAACCGAATCAATCATTGCCTG
CCCCGTCGCAGACGAAGTCAAGAACCGCAACCTCGCAAACCTCACCACCT
ACAGGTACCAATACGCAGGCAACTTCTCCAACATCTCCCCGCTGCCTTGG
TTCGGAGCCTATCATAGCTCAGAGCTCCCTCTTCTCTTTGGTACGCATTA
TGAGTATGGTGGGCCCTCTACGCAGTATGAGTGGGACGTGAGTTACGCGA
TGGAAGCGCTGTGGCTTTCATTTGCGGAGGATCCGTCGCGGGGGCCAGTG
CGGCTAGCTGTTGGGAATGCGGCAGCAAATCCGAATAACGGGAGTTATTT
TGCTTGGCCTGCTTTTGAGCAGGGGTCGGATAATTTGTTGGTTTTTGCAG
AAGGGGAGACGATGATGCAGTTGGTTGGGGCGGGGAGGATTGATGATTAT
TGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004881-T1.utr5p1 | KJC3_004881-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004881-T1.utr3p1 | KJC3_004881-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | MEROPS:MER0033188 |
| DBxref | InterPro:IPR019819 |
| DBxref | InterPro:IPR019826 |
| DBxref | InterPro:IPR002018 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF00135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:986825..989091 + |
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