You are here

Home

KJC3_004889-T1, KJC3_004889-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004889-T1
Unique NameKJC3_004889-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1010262..1011504+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004889-T1 ID=KJC3_004889-T1|Name=KJC3_004889-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1243bp|location=Sequence derived from alignment at ch4:1010262..1011504+ (Aspergillus niger KJC3)
ATGGCTTCACCCACTACTACAGATACAACAACAAAGAAATCCCCCCTCTC
CCGCCACCGCCACCTCTCCCCCCTCTCCTCCGTCCGCATCTCCCCCCTCC
AGCTCGGGGGCATGTCCCTCGGCACCACCTGGAGCGACCGCCTCGGCGCG
GTCCCCAAATCCTCCGCCTTCTCGCTCCTGGACCGATTCTACTCCCTGGG
AGGCAACTTCATCGACACGGCGAACGCCTACCAAGCCGGCCAATCCGAGG
AATGGATCGGCGAATGGATGGCCACGCGATCGCCGACTCGGCGGTCCGAG
ATGGTCATTGCGACGAAGTACACCTTATCCCCTATACCCCAGGGAAGCTC
CATCCAAGAAAGTAACTTCGGCGGCAACGGCACCAAATCCATGCGCGTAT
CCATCGATGAATCCCTCCGGAGGTTGAGAACAGACTACATAGATATATAC
TACGTGCATGCATGGGACTATTCGACCAACATCGAAGAACTCATGCAATC
GCTGAACCATCTCGTCGCGCAGGGCAAGGTGCTCTACCTAGGGATCAGCG
ATGCGCCGGCATGGGTAGTCAGCAAAGCGAACACATATGCCCGAGTACAC
GGGTTAAGAGGGTTCAGTGTTTATCAGGGACGGTATGGAGCTACGTGTCG
GGATCTGGAGAGGGAGATTATTCCGATGTGTAGGGAGGAGGGGATGGGGT
TGTGTGTTTGGGGGGTGTTGGGGAATGGTTTGTCTTCCTATCCTATCCTA
TTCCCCGTGTTTATGGGTAACGTGGTTAATGAACTAATAATATATAACAT
GGATAGGATATCTCCGCTCTCCGAATACTGCAGCCGAAAGAGTGCGGAAT
GTCTCGCACCTGCTTACCGGCCATGAGGAACATGTTTCGTTGGTGCTGGA
TACGGTTGCGAAGCGCCATGGTGAAGGTGCTTCGGTGACGAGCGTGGCTA
TTGCGTATGTCATGCAGAAAACACCTTACCTCTTTCCCATCATCGGTGGA
CGGACGGTCGAGCAGCTCGAGGAGAATGTCCAGGCGTTGAGTCTGGATCT
TACGGAGCAGGATGTGAGGGAAATTGACGCCGCGTATCCGTTTGACTTGG
GCTTTCCGCATAGTTTCCTCTGTCCCGGGGGATATCGCGATGGTGGGGGG
TGTCCGGGGCCGCAGGACGTGGCGTTTTCGAGGGCGATGGGAGAGTTTGA
TTATGTTGAGGGGGGGAAGGCGATTCGGCCGTTCAAGGGATAA
back to top

Coding sequence (CDS) from alignment at ch4:1010262..1011504+

>KJC3_004889-T1 ID=KJC3_004889-T1|Name=KJC3_004889-T1|organism=Aspergillus niger KJC3|type=CDS|length=2328bp|location=Sequence derived from alignment at ch4:1010262..1011504+ (Aspergillus niger KJC3)
ATGGCTTCACCCACTACTACAGATACAACAACAAAGAAATCCCCCCTCTC
CCGCCACCGCCACCTCTCCCCCCTCTCCTCCGTCCGCATCTCCCCCCTCC
AGCTCGGGGGCATGTCCCTCGGCACCACCTGGAGCGACCGCCTCGGCGCG
GTCCCCAAATCCTCCGCCTTCTCGCTCCTGGACCGATTCTACTCCCTGGG
AGGCAACTTCATCGACACGGCGAACGCCTACCAAGCCGGCCAATCCGAGG
AATGGATCGGCGAATGGATGGCCACGCGATCGCCGACTCGGCGGTCCGAG
ATGGTCATTGCGACGAAGTACACCTTATCCCCTATACCCCAGGGAAGCTC
CATCCAAGAAAGTAACTTCGGCGGCAACGGCACCAAATCCATGCGCGTAT
CCATCGATGAATCCCTCCGGAGGTTGAGAACAGACTACATAGATATATAC
TACGTGCATGCATGGGACTATTCGACCAACATCGAAGAACTCATGCAATC
GCTGAACCATCTCGTCGCGCAGGGCAAGGTGCTCTACCTAGGGATCAGCG
ATGCGCCGGCATGGGTAGTCAGCAAAGCGAACACATATGCCCGAGTACAC
GGGTTAAGAGGGTTCAGTGTTTATCAGGGACGGTATGGAGCTACGTGTCG
GGATCTGGAGAGGGAGATTATTCCGATGTGTAGGGAGGAGGGGATGGGGT
TGTGTGTTTGGGGGGTGTTGGGGAATGGATATCTCCGCTCTCCGAATACT
GCAGCCGAAAGAGTGCGGAATGTCTCGCACCTGCTTACCGGCCATGAGGA
ACATGTTTCGTTGGTGCTGGATACGGTTGCGAAGCGCCATGGTGAAGGTG
CTTCGGTGACGAGCGTGGCTATTGCGTATGTCATGCAGAAAACACCTTAC
CTCTTTCCCATCATCGGTGGACGGACGGTCGAGCAGCTCGAGGAGAATGT
CCAGGCGTTGAGTCTGGATCTTACGGAGCAGGATGTGAGGGAAATTGACG
CCGCGTATCCGTTTGACTTGGGCTTTCCGCATAGTTTCCTCTGTCCCGGG
GGATATCGCGATGGTGGGGGGTGTCCGGGGCCGCAGGACGTGGCGTTTTC
GAGGGCGATGGGAGAGTTTGATTATGTTGAGGGGGGGAAGGCGATTCGGC
CGTTCAAGGGATAAATGGCTTCACCCACTACTACAGATACAACAACAAAG
AAATCCCCCCTCTCCCGCCACCGCCACCTCTCCCCCCTCTCCTCCGTCCG
CATCTCCCCCCTCCAGCTCGGGGGCATGTCCCTCGGCACCACCTGGAGCG
ACCGCCTCGGCGCGGTCCCCAAATCCTCCGCCTTCTCGCTCCTGGACCGA
TTCTACTCCCTGGGAGGCAACTTCATCGACACGGCGAACGCCTACCAAGC
CGGCCAATCCGAGGAATGGATCGGCGAATGGATGGCCACGCGATCGCCGA
CTCGGCGGTCCGAGATGGTCATTGCGACGAAGTACACCTTATCCCCTATA
CCCCAGGGAAGCTCCATCCAAGAAAGTAACTTCGGCGGCAACGGCACCAA
ATCCATGCGCGTATCCATCGATGAATCCCTCCGGAGGTTGAGAACAGACT
ACATAGATATATACTACGTGCATGCATGGGACTATTCGACCAACATCGAA
GAACTCATGCAATCGCTGAACCATCTCGTCGCGCAGGGCAAGGTGCTCTA
CCTAGGGATCAGCGATGCGCCGGCATGGGTAGTCAGCAAAGCGAACACAT
ATGCCCGAGTACACGGGTTAAGAGGGTTCAGTGTTTATCAGGGACGGTAT
GGAGCTACGTGTCGGGATCTGGAGAGGGAGATTATTCCGATGTGTAGGGA
GGAGGGGATGGGGTTGTGTGTTTGGGGGGTGTTGGGGAATGGATATCTCC
GCTCTCCGAATACTGCAGCCGAAAGAGTGCGGAATGTCTCGCACCTGCTT
ACCGGCCATGAGGAACATGTTTCGTTGGTGCTGGATACGGTTGCGAAGCG
CCATGGTGAAGGTGCTTCGGTGACGAGCGTGGCTATTGCGTATGTCATGC
AGAAAACACCTTACCTCTTTCCCATCATCGGTGGACGGACGGTCGAGCAG
CTCGAGGAGAATGTCCAGGCGTTGAGTCTGGATCTTACGGAGCAGGATGT
GAGGGAAATTGACGCCGCGTATCCGTTTGACTTGGGCTTTCCGCATAGTT
TCCTCTGTCCCGGGGGATATCGCGATGGTGGGGGGTGTCCGGGGCCGCAG
GACGTGGCGTTTTCGAGGGCGATGGGAGAGTTTGATTATGTTGAGGGGGG
GAAGGCGATTCGGCCGTTCAAGGGATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004889KJC3_004889Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004889-T1.exon1KJC3_004889-T1.exon1Aspergillus niger KJC3exon
KJC3_004889-T1.exon2KJC3_004889-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004889-T1.cdsKJC3_004889-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004889-T1KJC3_004889-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefPFAM:PF00248
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1010262..1011504 +
Powered by Drupal