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KJC3_004913-T1, KJC3_004913-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004913-T1
Unique NameKJC3_004913-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1098402..1099592+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004913-T1 ID=KJC3_004913-T1|Name=KJC3_004913-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1191bp|location=Sequence derived from alignment at ch4:1098402..1099592+ (Aspergillus niger KJC3)
ATGTGTGAAAAATATAGATCTCAATCCGGCGCAATATTGCTCTTTAGTCA
GCTCATCTTTCAAAACATTGATCTTTCGAGCCATGCGTACTGGCTCATCG
CACTTTGCCTGGTAGGGCTGTGGATGTGTTTCCGGGTCTCTCCAGAGTCC
CCGTATTGGCATGCACGCAACGGAGAAATGCGGCAAGCTTATAAAGCTCT
GATTAGGTGTCGCCGCACTGCTATGCAAGCCAGCCGTGACCTTTACAGAA
TCTATTTGATCGGGACACAAAAGGCTGGACGAACAACAGTAAGGCTTGTG
CTACAGGCGCTGGCAATCACGACCGTCTTCTTACTTTCGACGATCGTCCC
TAAAGTATTAGCAACGCTGCTTATCTTCTCCTTTCTCGAAGGCGTGCAGG
AGTATGGTATCCAGTTTGTTACGACACTTTTCGTCCCATTAATCATTACC
GGCGCTCTGATAATGTTTCTTGTTCCACTGTCAATCAACCTCATTGAGCG
GATTGGTCGGCGGGGACTGATATTGGCAAGCATGTCCGTCGTATCCTGCA
TCATCTTCGCCATGATGTTATCATACCCTTCAATCGCGATCTCCTTTTTG
CTTGTCGTACCGTCTTTCTTTCACAAAATAGTGTGGGAAATATATGCAGC
AGAAGTATCCTGTTCAGTCGGCCGCGGTAGGTGTTTCGCCAACTCTAGAC
ATCGTTCGACTTTATTAATGAGCTTTAGAGGAAGCAATGGCAGCCACCTT
GACTGTTTCGTTACTTCAAGACACTGGCCTAGCCTATTGGATGGTCAACA
TTGTGAAAAATAGGCCTGCTTCACTCTCTCCAAATTATTTTCTTGGAGCT
CCGATATCATTCTTTTTGTAAGTTTGCTTGCCTCCTTGCTGAGTGATGCT
TATAGACATGTAACTAGTTTCTTGCATTGTGTGTGCATGGTCCTCCTCTT
CCTGCTCCTGATAGAGACCAGAGGACGCACTTTAGAAGAGATCCTGGCTC
TCTTGCAGGCCTCGCTTGTCAATCGTGTCGCCTACCGTATCCGGGTCTAC
ACCCCGTACATCCTCAAAAGAATATTTCTGAGGCAGCGCGTGAAGCTCGA
AACTTTTGAGGAGTCTGAATACGGTACTCGAGCAATTCGCCTAGGATCCA
TCGATACGGCGCCCACCTTTCGCAGCTACAGCTTTGTTTGA
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Coding sequence (CDS) from alignment at ch4:1098402..1099592+

>KJC3_004913-T1 ID=KJC3_004913-T1|Name=KJC3_004913-T1|organism=Aspergillus niger KJC3|type=CDS|length=3267bp|location=Sequence derived from alignment at ch4:1098402..1099592+ (Aspergillus niger KJC3)
ATGTGTGAAAAATATAGATCTCAATCCGGCGCAATATTGCTCTTTAGTCA
GCTCATCTTTCAAAACATTGATCTTTCGAGCCATGCGTACTGGCTCATCG
CACTTTGCCTGGTAGGGCTGTGGATGTGTTTCCGGGTCTCTCCAGAGTCC
CCGTATTGGCATGCACGCAACGGAGAAATGCGGCAAGCTTATAAAGCTCT
GATTAGGTGTCGCCGCACTGCTATGCAAGCCAGCCGTGACCTTTACAGAA
TCTATTTGATCGGGACACAAAAGGCTGGACGAACAACAGTAAGGCTTGTG
CTACAGGCGCTGGCAATCACGACCGTCTTCTTACTTTCGACGATCGTCCC
TAAAGTATTAGCAACGCTGCTTATCTTCTCCTTTCTCGAAGGCGTGCAGG
AGTATGGTATCCAGTTTGTTACGACACTTTTCGTCCCATTAATCATTACC
GGCGCTCTGATAATGTTTCTTGTTCCACTGTCAATCAACCTCATTGAGCG
GATTGGTCGGCGGGGACTGATATTGGCAAGCATGTCCGTCGTATCCTGCA
TCATCTTCGCCATGATGTTATCATACCCTTCAATCGCGATCTCCTTTTTG
CTTGTCGTACCGTCTTTCTTTCACAAAATAGTGTGGGAAATATATGCAGC
AGAAGTATCCTGTTCAGTCGGCCGCGAGGAAGCAATGGCAGCCACCTTGA
CTGTTTCGTTACTTCAAGACACTGGCCTAGCCTATTGGATGGTCAACATT
GTGAAAAATAGGCCTGCTTCACTCTCTCCAAATTATTTTCTTGGAGCTCC
GATATCATTCTTTTTTTTCTTGCATTGTGTGTGCATGGTCCTCCTCTTCC
TGCTCCTGATAGAGACCAGAGGACGCACTTTAGAAGAGATCCTGGCTCTC
TTGCAGGCCTCGCTTGTCAATCGTGTCGCCTACCGTATCCGGGTCTACAC
CCCGTACATCCTCAAAAGAATATTTCTGAGGCAGCGCGTGAAGCTCGAAA
CTTTTGAGGAGTCTGAATACGGTACTCGAGCAATTCGCCTAGGATCCATC
GATACGGCGCCCACCTTTCGCAGCTACAGCTTTGTTTGAATGTGTGAAAA
ATATAGATCTCAATCCGGCGCAATATTGCTCTTTAGTCAGCTCATCTTTC
AAAACATTGATCTTTCGAGCCATGCGTACTGGCTCATCGCACTTTGCCTG
GTAGGGCTGTGGATGTGTTTCCGGGTCTCTCCAGAGTCCCCGTATTGGCA
TGCACGCAACGGAGAAATGCGGCAAGCTTATAAAGCTCTGATTAGGTGTC
GCCGCACTGCTATGCAAGCCAGCCGTGACCTTTACAGAATCTATTTGATC
GGGACACAAAAGGCTGGACGAACAACAGTAAGGCTTGTGCTACAGGCGCT
GGCAATCACGACCGTCTTCTTACTTTCGACGATCGTCCCTAAAGTATTAG
CAACGCTGCTTATCTTCTCCTTTCTCGAAGGCGTGCAGGAGTATGGTATC
CAGTTTGTTACGACACTTTTCGTCCCATTAATCATTACCGGCGCTCTGAT
AATGTTTCTTGTTCCACTGTCAATCAACCTCATTGAGCGGATTGGTCGGC
GGGGACTGATATTGGCAAGCATGTCCGTCGTATCCTGCATCATCTTCGCC
ATGATGTTATCATACCCTTCAATCGCGATCTCCTTTTTGCTTGTCGTACC
GTCTTTCTTTCACAAAATAGTGTGGGAAATATATGCAGCAGAAGTATCCT
GTTCAGTCGGCCGCGAGGAAGCAATGGCAGCCACCTTGACTGTTTCGTTA
CTTCAAGACACTGGCCTAGCCTATTGGATGGTCAACATTGTGAAAAATAG
GCCTGCTTCACTCTCTCCAAATTATTTTCTTGGAGCTCCGATATCATTCT
TTTTTTTCTTGCATTGTGTGTGCATGGTCCTCCTCTTCCTGCTCCTGATA
GAGACCAGAGGACGCACTTTAGAAGAGATCCTGGCTCTCTTGCAGGCCTC
GCTTGTCAATCGTGTCGCCTACCGTATCCGGGTCTACACCCCGTACATCC
TCAAAAGAATATTTCTGAGGCAGCGCGTGAAGCTCGAAACTTTTGAGGAG
TCTGAATACGGTACTCGAGCAATTCGCCTAGGATCCATCGATACGGCGCC
CACCTTTCGCAGCTACAGCTTTGTTTGAATGTGTGAAAAATATAGATCTC
AATCCGGCGCAATATTGCTCTTTAGTCAGCTCATCTTTCAAAACATTGAT
CTTTCGAGCCATGCGTACTGGCTCATCGCACTTTGCCTGGTAGGGCTGTG
GATGTGTTTCCGGGTCTCTCCAGAGTCCCCGTATTGGCATGCACGCAACG
GAGAAATGCGGCAAGCTTATAAAGCTCTGATTAGGTGTCGCCGCACTGCT
ATGCAAGCCAGCCGTGACCTTTACAGAATCTATTTGATCGGGACACAAAA
GGCTGGACGAACAACAGTAAGGCTTGTGCTACAGGCGCTGGCAATCACGA
CCGTCTTCTTACTTTCGACGATCGTCCCTAAAGTATTAGCAACGCTGCTT
ATCTTCTCCTTTCTCGAAGGCGTGCAGGAGTATGGTATCCAGTTTGTTAC
GACACTTTTCGTCCCATTAATCATTACCGGCGCTCTGATAATGTTTCTTG
TTCCACTGTCAATCAACCTCATTGAGCGGATTGGTCGGCGGGGACTGATA
TTGGCAAGCATGTCCGTCGTATCCTGCATCATCTTCGCCATGATGTTATC
ATACCCTTCAATCGCGATCTCCTTTTTGCTTGTCGTACCGTCTTTCTTTC
ACAAAATAGTGTGGGAAATATATGCAGCAGAAGTATCCTGTTCAGTCGGC
CGCGAGGAAGCAATGGCAGCCACCTTGACTGTTTCGTTACTTCAAGACAC
TGGCCTAGCCTATTGGATGGTCAACATTGTGAAAAATAGGCCTGCTTCAC
TCTCTCCAAATTATTTTCTTGGAGCTCCGATATCATTCTTTTTTTTCTTG
CATTGTGTGTGCATGGTCCTCCTCTTCCTGCTCCTGATAGAGACCAGAGG
ACGCACTTTAGAAGAGATCCTGGCTCTCTTGCAGGCCTCGCTTGTCAATC
GTGTCGCCTACCGTATCCGGGTCTACACCCCGTACATCCTCAAAAGAATA
TTTCTGAGGCAGCGCGTGAAGCTCGAAACTTTTGAGGAGTCTGAATACGG
TACTCGAGCAATTCGCCTAGGATCCATCGATACGGCGCCCACCTTTCGCA
GCTACAGCTTTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004913KJC3_004913Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004913-T1.exon1KJC3_004913-T1.exon1Aspergillus niger KJC3exon
KJC3_004913-T1.exon2KJC3_004913-T1.exon2Aspergillus niger KJC3exon
KJC3_004913-T1.exon3KJC3_004913-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004913-T1.cdsKJC3_004913-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004913-T1KJC3_004913-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR005828
DBxrefPFAM:PF00083
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1098402..1099592 +
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