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KJC3_004931-T1, KJC3_004931-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004931-T1
Unique NameKJC3_004931-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1150623..1151895+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004931-T1 ID=KJC3_004931-T1|Name=KJC3_004931-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1273bp|location=Sequence derived from alignment at ch4:1150623..1151895+ (Aspergillus niger KJC3)
GGATATACTTCGTTCACACTTTGGAGTCATTGATGCAATGAGGGGTAGTG
ATGAGGGGTGCTGTCATGCCTTCGTTCAGTCAATTTCCCACGTCTTGTGT
TTCTTTTTCCTTCAGCGCGATCAAGTAACCTCAATTATCTCTCGTGACAC
TTATTACCTCTCAAACATCACACATACACACTGCCATCTACCTGCAATAC
ATCCATCTATCCCACCGAATCGAACCAACAACCACAACCACAACCACCAT
GTCTACACCAGAAAACACCCTCGCCATTCTCGGCTGCGGTACATCCATTC
CCTAACCCTGCATACACACCCATCCATCAATCCAATTGACGAACCAACCA
CAGGAAAAATGGGCATCGCCATCCTCAACGGCCTGTTAAACACCACCACC
ACTACAGAATCCACCACCAACACCCCCCTCCCAACGCACTTCATCGCCAC
CGTCCGCAGCACCTCCTCCCTCACCACCCTCCAATCCCAATTCCAATCCC
ATCTCACCACCTCATCCCTAACCATCCACTCCTCCACCCACAACCACGCT
GCCATCACCTCCGCCTCCACCATAATCCTCGCCTGCGATCCCACCGATAT
CCCCTCCCTCCTCAGCGACCCCTCCACCAGATCCGCCCTCTGCAGTCCTC
CACCCACCTCATCCCCAAAACTCCTCATCAGCATCGCCGCCGGCTGGACC
GTCTCTTCCCTGCGCGAGCTCCTCTCCCCTCCCCAAGAATCTATCTTGTA
CATCCTCCGCGCGCTGCCCAATATCTGCGCCACTATCTCCCAGTCTATCA
CGGCCATCGAGCTTCCCTCTGAAGAGGTGCAATTGAGTGCTAGGACTCGT
GTGCCGCAAGCGTTGATTTCCCTGACGGAGGGGATTTTCAGTAGGATAGG
ACGCACGGTGCAGGTTAGGGCTGATCAGATGGATACGTTTACGGTGCTTG
GGGGGTCCACGCCTGCGTTCATAGCGGTGTTTGTGGAGGCGTTGGTGGAT
GGGGGCGTCGCGATGGGGTTAGGGAGGGAGGAGGCGCGGATGACGGTTGC
GCAGGTGTTGAGGGGCACGGGGGATTTGTTGCTTGGTGGGGAGCATCCGG
CGTTGCTGAAGGAGAGGGGGACTTCGCCGGGGGGGTGTACTATGGGGGGA
CTTTGTGTGTTGGAGGAGGGAGGGTTTAGGGGGTTGGTCGGGAGGGCGGT
TAGGGAGGGGGTCACTGTGGCGGAGGGGATGGGAAGGGGGGTGGGGTTGG
TTAATGGGACGGGGAGGAAGTAG
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Coding sequence (CDS) from alignment at ch4:1150623..1151895+

>KJC3_004931-T1 ID=KJC3_004931-T1|Name=KJC3_004931-T1|organism=Aspergillus niger KJC3|type=CDS|length=1920bp|location=Sequence derived from alignment at ch4:1150623..1151895+ (Aspergillus niger KJC3)
ATGTCTACACCAGAAAACACCCTCGCCATTCTCGGCTGCGGAAAAATGGG
CATCGCCATCCTCAACGGCCTGTTAAACACCACCACCACTACAGAATCCA
CCACCAACACCCCCCTCCCAACGCACTTCATCGCCACCGTCCGCAGCACC
TCCTCCCTCACCACCCTCCAATCCCAATTCCAATCCCATCTCACCACCTC
ATCCCTAACCATCCACTCCTCCACCCACAACCACGCTGCCATCACCTCCG
CCTCCACCATAATCCTCGCCTGCGATCCCACCGATATCCCCTCCCTCCTC
AGCGACCCCTCCACCAGATCCGCCCTCTGCAGTCCTCCACCCACCTCATC
CCCAAAACTCCTCATCAGCATCGCCGCCGGCTGGACCGTCTCTTCCCTGC
GCGAGCTCCTCTCCCCTCCCCAAGAATCTATCTTGTACATCCTCCGCGCG
CTGCCCAATATCTGCGCCACTATCTCCCAGTCTATCACGGCCATCGAGCT
TCCCTCTGAAGAGGTGCAATTGAGTGCTAGGACTCGTGTGCCGCAAGCGT
TGATTTCCCTGACGGAGGGGATTTTCAGTAGGATAGGACGCACGGTGCAG
GTTAGGGCTGATCAGATGGATACGTTTACGGTGCTTGGGGGGTCCACGCC
TGCGTTCATAGCGGTGTTTGTGGAGGCGTTGGTGGATGGGGGCGTCGCGA
TGGGGTTAGGGAGGGAGGAGGCGCGGATGACGGTTGCGCAGGTGTTGAGG
GGCACGGGGGATTTGTTGCTTGGTGGGGAGCATCCGGCGTTGCTGAAGGA
GAGGGGGACTTCGCCGGGGGGGTGTACTATGGGGGGACTTTGTGTGTTGG
AGGAGGGAGGGTTTAGGGGGTTGGTCGGGAGGGCGGTTAGGGAGGGGGTC
ACTGTGGCGGAGGGGATGGGAAGGGGGGTGGGGTTGGTTAATGGGACGGG
GAGGAAGTAGATGTCTACACCAGAAAACACCCTCGCCATTCTCGGCTGCG
GAAAAATGGGCATCGCCATCCTCAACGGCCTGTTAAACACCACCACCACT
ACAGAATCCACCACCAACACCCCCCTCCCAACGCACTTCATCGCCACCGT
CCGCAGCACCTCCTCCCTCACCACCCTCCAATCCCAATTCCAATCCCATC
TCACCACCTCATCCCTAACCATCCACTCCTCCACCCACAACCACGCTGCC
ATCACCTCCGCCTCCACCATAATCCTCGCCTGCGATCCCACCGATATCCC
CTCCCTCCTCAGCGACCCCTCCACCAGATCCGCCCTCTGCAGTCCTCCAC
CCACCTCATCCCCAAAACTCCTCATCAGCATCGCCGCCGGCTGGACCGTC
TCTTCCCTGCGCGAGCTCCTCTCCCCTCCCCAAGAATCTATCTTGTACAT
CCTCCGCGCGCTGCCCAATATCTGCGCCACTATCTCCCAGTCTATCACGG
CCATCGAGCTTCCCTCTGAAGAGGTGCAATTGAGTGCTAGGACTCGTGTG
CCGCAAGCGTTGATTTCCCTGACGGAGGGGATTTTCAGTAGGATAGGACG
CACGGTGCAGGTTAGGGCTGATCAGATGGATACGTTTACGGTGCTTGGGG
GGTCCACGCCTGCGTTCATAGCGGTGTTTGTGGAGGCGTTGGTGGATGGG
GGCGTCGCGATGGGGTTAGGGAGGGAGGAGGCGCGGATGACGGTTGCGCA
GGTGTTGAGGGGCACGGGGGATTTGTTGCTTGGTGGGGAGCATCCGGCGT
TGCTGAAGGAGAGGGGGACTTCGCCGGGGGGGTGTACTATGGGGGGACTT
TGTGTGTTGGAGGAGGGAGGGTTTAGGGGGTTGGTCGGGAGGGCGGTTAG
GGAGGGGGTCACTGTGGCGGAGGGGATGGGAAGGGGGGTGGGGTTGGTTA
ATGGGACGGGGAGGAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006561proline biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0004735pyrroline-5-carboxylate reductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004931KJC3_004931Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004931-T1.utr5p1KJC3_004931-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004931-T1.exon1KJC3_004931-T1.exon1Aspergillus niger KJC3exon
KJC3_004931-T1.exon2KJC3_004931-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004931-T1.cdsKJC3_004931-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004931-T1KJC3_004931-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR029036
DBxrefInterPro:IPR028939
DBxrefInterPro:IPR000304
DBxrefPFAM:PF14748
DBxrefPFAM:PF03807
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1150623..1151895 +
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