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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1166057..1168524- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004936-T1 ID=KJC3_004936-T1|Name=KJC3_004936-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2468bp|location=Sequence derived from alignment at ch4:1166057..1168524- (Aspergillus niger KJC3)
GCAAGCGCCAGCCAAACGGCTCTTTAGTCCCTCCAGCTTGCCCAGAGAGT
GTCCGCCCGTCGTCGAACCTCAGGGGAGCAACGCAGCCATTCCACATCCC
ATCCCATCCACTCCTCCATCTAATTCATTCAACCTTCATTCCACCTCTCT
TGTTTCCCCCCCCCATTCCTTTCCTTTGGCTCAAACCACCTTCGTCCTTG
TCTCTGCCACTCGCTTTCTACCTCTATTTTCTTCAATTTCTTCTTCTCTC
TTCTTTAATTTCCTCCATTCCTCCCCTATTAATTCATCATGTCGTTCAAC
GCGGTATGTTACTTCCTTCCCCTTTCTGGCCTTGTTGCTCTGAAGCCTAT
CCATGCTCCTTCCCCCTCCCATCCAACCCACCCCGTCCATTGTCCCCTGA
ACCGTGGTTTCTTTTTTCATTTTCTGTCTTCAGGCTCTCGGCCAGAGATT
TGTCCACGATTAATTTCTTGCTCTAATTCCCAGATGAAGCTCCGTCGCAA
GAAGAATGTCAAGAAGGGTATCCAGTTCTGCCTGATGGTCTGTGGTGCCA
GCGGAACCGGTATGTGCTGCATCATACAAAACAACACCGATTGCAGAATT
GACCGAATTCCCCCTTTTCGTTAGGACGTACCACCTTCGTCAACACTCTT
TGTGGAAAGAAGGTCCTGGAAGGCAAGGACTGCGACGACCCGGCCAACGC
TCACATTGAGGAGGGTGTCCGCATCAAGCCAGTCACAGTTGGTAAGTCAC
CGGAACATGGACCACCAGCATACACGCCACTAATTAAATCTCGCAAAGAG
CTGGAATTGGACGACGAAGGCACCCGCATCTCCCTCACCATCGTTGATAC
CCCCGGTTTCGGAGACCAGATTGACAACGAAGCAAGGCACGTTGAACTTG
GCCGCCTTCCCAACGCCCCCTACGAATACTGACCGTCCCAACAGCTTCGG
CGAAATTGTTGGATACCTTGAGCGCCAATACGATGATATTCTTGCGGAGG
AATCACGAATCAAGCGTAACCCCCGCTTCAGGGACAACCGTGTTCACGTC
CTGCTCTACTTCATCACACCCACCGGCCATGGACTGCGTGAGCTGGACAT
CGAATTGATGAAGCGCCTTTCTCCCCGTGTCAACGTCATCCCCGTCATCG
GCAAGGCCGACTCTCTTACCCCTGCCGAATTGGCCGAATCCAAGAAGCTC
ATCATGGAGGATATTGAGCACTACCGCATTCCCGTGTACAACTTCCCCTA
CGATATCGAGGAGGACGATGAGGACACCGTGGAGGAGAATGCTGAGCTTC
GTGGTCTGATGCCGTTTGCCATTGTTGGCTCCGAGGACTTCGTTGAGATT
GACGGCAAGAAGGTGCGGGCCAGGCAATATCCTTGGGGTGTCGTGGACGT
TGAGAACCCTCGTCACTCGGACTTCTTGGCCATCCGCAGCGCTCTTCTTC
ACAGCCATCTCGCAGACCTTAAGGAAATTACTCACGACTTCCTCTACGAA
AACTACCGTACTGAGAAGCTCAGCAAGAGTGTTGATGGTGCTACGCCGTA
CGTATACCCGCTTGCCATTGTTACAGTCTGCTGGAACGAAAACTGACCCC
TAGCCATAGTACACAAGACTCTTCGATGAACCCAGAAGACCTAGCATCCC
AGTCCGTTAGACTGAAGGAGGAGCAGCTTCGTCGCGAGGAGGAGAAGCTC
CGTGAGATCGAACTCAAGGTGCAGCGCGAGATCGCTGAGAAGCGACAGGA
ACTGCTGGCTCGTGAGAGTCAGCTGAGGGAAATCGAGGCTCGCATGGCGC
GTGAAGCAAGCCAGAGTCAGATTGATAGCATCAGCGATGCTTGAGCTCTT
CCCAAACCTGTTTTCCGGAGGGAGACGGATCTTGCATGTTGACCCCGGTC
GCCGTTTGTGCCTATGTAATGAGATTCGTGGCACGGCAGTTGTGACTGTC
GACGGGGAAAAGATTAGTCGACCGTTTATTCACGTTAATAGCTTCTTATC
CGAGAGGAGAGGGGAAAATGCAACGTTCCGTTTATCTTAACGACTGGCAG
CATTCCCCCTTTGTTAACTCAGAGGGTTGCGGACAAGAGGGGATGGATTC
CTGCTGCTGCTCTGCTCTTTCCCTCTCCTGATTTTGGCTTCTTCCCATGT
CTTCTTTAATCTGGTCGAAAGATCTCCGAACTGTTTCGCGCTGCCCATGT
TGCGAAGCTTGGGGTCAGAGATAGCATCTTTTTAATTTGCTGACAGTTGT
CGCTGGACCTGCATAACCTCCTTCTCATTGCCCATCCCTTTTTATTTTCC
CATTTCTGCTTTTGTCGATGAAACCTGTCCCAATCTCAAGCAGCGCAGCA
AGATTCCCTCTTTTGTCGTTTCATATTCCTTGTGCTCGTGGTTCATGTCT
TAATCTTATCATTATATGTCTTAGTTGAATAGTAGTATATGAGGACAAAA
GATCCGAAGTTTTTCCTG back to topCoding sequence (CDS) from alignment at ch4:1166057..1168524- >KJC3_004936-T1 ID=KJC3_004936-T1|Name=KJC3_004936-T1|organism=Aspergillus niger KJC3|type=CDS|length=6804bp|location=Sequence derived from alignment at ch4:1166057..1168524- (Aspergillus niger KJC3)
TACACAAGACTCTTCGATGAACCCAGAAGACCTAGCATCCCAGTCCGTTA
GACTGAAGGAGGAGCAGCTTCGTCGCGAGGAGGAGAAGCTCCGTGAGATC
GAACTCAAGGTGCAGCGCGAGATCGCTGAGAAGCGACAGGAACTGCTGGC
TCGTGAGAGTCAGCTGAGGGAAATCGAGGCTCGCATGGCGCGTGAAGCAA
GCCAGAGTCAGATTGATAGCATCAGCGATGCTTGACTTCGGCGAAATTGT
TGGATACCTTGAGCGCCAATACGATGATATTCTTGCGGAGGAATCACGAA
TCAAGCGTAACCCCCGCTTCAGGGACAACCGTGTTCACGTCCTGCTCTAC
TTCATCACACCCACCGGCCATGGACTGCGTGAGCTGGACATCGAATTGAT
GAAGCGCCTTTCTCCCCGTGTCAACGTCATCCCCGTCATCGGCAAGGCCG
ACTCTCTTACCCCTGCCGAATTGGCCGAATCCAAGAAGCTCATCATGGAG
GATATTGAGCACTACCGCATTCCCGTGTACAACTTCCCCTACGATATCGA
GGAGGACGATGAGGACACCGTGGAGGAGAATGCTGAGCTTCGTGGTCTGA
TGCCGTTTGCCATTGTTGGCTCCGAGGACTTCGTTGAGATTGACGGCAAG
AAGGTGCGGGCCAGGCAATATCCTTGGGGTGTCGTGGACGTTGAGAACCC
TCGTCACTCGGACTTCTTGGCCATCCGCAGCGCTCTTCTTCACAGCCATC
TCGCAGACCTTAAGGAAATTACTCACGACTTCCTCTACGAAAACTACCGT
ACTGAGAAGCTCAGCAAGAGTGTTGATGGTGCTACGCCAGCTGGAATTGG
ACGACGAAGGCACCCGCATCTCCCTCACCATCGTTGATACCCCCGGTTTC
GGAGACCAGATTGACAACGAAGCAAGGACGTACCACCTTCGTCAACACTC
TTTGTGGAAAGAAGGTCCTGGAAGGCAAGGACTGCGACGACCCGGCCAAC
GCTCACATTGAGGAGGGTGTCCGCATCAAGCCAGTCACAGTTGATGAAGC
TCCGTCGCAAGAAGAATGTCAAGAAGGGTATCCAGTTCTGCCTGATGGTC
TGTGGTGCCAGCGGAACCGATGTCGTTCAACGCGTACACAAGACTCTTCG
ATGAACCCAGAAGACCTAGCATCCCAGTCCGTTAGACTGAAGGAGGAGCA
GCTTCGTCGCGAGGAGGAGAAGCTCCGTGAGATCGAACTCAAGGTGCAGC
GCGAGATCGCTGAGAAGCGACAGGAACTGCTGGCTCGTGAGAGTCAGCTG
AGGGAAATCGAGGCTCGCATGGCGCGTGAAGCAAGCCAGAGTCAGATTGA
TAGCATCAGCGATGCTTGACTTCGGCGAAATTGTTGGATACCTTGAGCGC
CAATACGATGATATTCTTGCGGAGGAATCACGAATCAAGCGTAACCCCCG
CTTCAGGGACAACCGTGTTCACGTCCTGCTCTACTTCATCACACCCACCG
GCCATGGACTGCGTGAGCTGGACATCGAATTGATGAAGCGCCTTTCTCCC
CGTGTCAACGTCATCCCCGTCATCGGCAAGGCCGACTCTCTTACCCCTGC
CGAATTGGCCGAATCCAAGAAGCTCATCATGGAGGATATTGAGCACTACC
GCATTCCCGTGTACAACTTCCCCTACGATATCGAGGAGGACGATGAGGAC
ACCGTGGAGGAGAATGCTGAGCTTCGTGGTCTGATGCCGTTTGCCATTGT
TGGCTCCGAGGACTTCGTTGAGATTGACGGCAAGAAGGTGCGGGCCAGGC
AATATCCTTGGGGTGTCGTGGACGTTGAGAACCCTCGTCACTCGGACTTC
TTGGCCATCCGCAGCGCTCTTCTTCACAGCCATCTCGCAGACCTTAAGGA
AATTACTCACGACTTCCTCTACGAAAACTACCGTACTGAGAAGCTCAGCA
AGAGTGTTGATGGTGCTACGCCAGCTGGAATTGGACGACGAAGGCACCCG
CATCTCCCTCACCATCGTTGATACCCCCGGTTTCGGAGACCAGATTGACA
ACGAAGCAAGGACGTACCACCTTCGTCAACACTCTTTGTGGAAAGAAGGT
CCTGGAAGGCAAGGACTGCGACGACCCGGCCAACGCTCACATTGAGGAGG
GTGTCCGCATCAAGCCAGTCACAGTTGATGAAGCTCCGTCGCAAGAAGAA
TGTCAAGAAGGGTATCCAGTTCTGCCTGATGGTCTGTGGTGCCAGCGGAA
CCGATGTCGTTCAACGCGTACACAAGACTCTTCGATGAACCCAGAAGACC
TAGCATCCCAGTCCGTTAGACTGAAGGAGGAGCAGCTTCGTCGCGAGGAG
GAGAAGCTCCGTGAGATCGAACTCAAGGTGCAGCGCGAGATCGCTGAGAA
GCGACAGGAACTGCTGGCTCGTGAGAGTCAGCTGAGGGAAATCGAGGCTC
GCATGGCGCGTGAAGCAAGCCAGAGTCAGATTGATAGCATCAGCGATGCT
TGACTTCGGCGAAATTGTTGGATACCTTGAGCGCCAATACGATGATATTC
TTGCGGAGGAATCACGAATCAAGCGTAACCCCCGCTTCAGGGACAACCGT
GTTCACGTCCTGCTCTACTTCATCACACCCACCGGCCATGGACTGCGTGA
GCTGGACATCGAATTGATGAAGCGCCTTTCTCCCCGTGTCAACGTCATCC
CCGTCATCGGCAAGGCCGACTCTCTTACCCCTGCCGAATTGGCCGAATCC
AAGAAGCTCATCATGGAGGATATTGAGCACTACCGCATTCCCGTGTACAA
CTTCCCCTACGATATCGAGGAGGACGATGAGGACACCGTGGAGGAGAATG
CTGAGCTTCGTGGTCTGATGCCGTTTGCCATTGTTGGCTCCGAGGACTTC
GTTGAGATTGACGGCAAGAAGGTGCGGGCCAGGCAATATCCTTGGGGTGT
CGTGGACGTTGAGAACCCTCGTCACTCGGACTTCTTGGCCATCCGCAGCG
CTCTTCTTCACAGCCATCTCGCAGACCTTAAGGAAATTACTCACGACTTC
CTCTACGAAAACTACCGTACTGAGAAGCTCAGCAAGAGTGTTGATGGTGC
TACGCCAGCTGGAATTGGACGACGAAGGCACCCGCATCTCCCTCACCATC
GTTGATACCCCCGGTTTCGGAGACCAGATTGACAACGAAGCAAGGACGTA
CCACCTTCGTCAACACTCTTTGTGGAAAGAAGGTCCTGGAAGGCAAGGAC
TGCGACGACCCGGCCAACGCTCACATTGAGGAGGGTGTCCGCATCAAGCC
AGTCACAGTTGATGAAGCTCCGTCGCAAGAAGAATGTCAAGAAGGGTATC
CAGTTCTGCCTGATGGTCTGTGGTGCCAGCGGAACCGATGTCGTTCAACG
CGTACACAAGACTCTTCGATGAACCCAGAAGACCTAGCATCCCAGTCCGT
TAGACTGAAGGAGGAGCAGCTTCGTCGCGAGGAGGAGAAGCTCCGTGAGA
TCGAACTCAAGGTGCAGCGCGAGATCGCTGAGAAGCGACAGGAACTGCTG
GCTCGTGAGAGTCAGCTGAGGGAAATCGAGGCTCGCATGGCGCGTGAAGC
AAGCCAGAGTCAGATTGATAGCATCAGCGATGCTTGACTTCGGCGAAATT
GTTGGATACCTTGAGCGCCAATACGATGATATTCTTGCGGAGGAATCACG
AATCAAGCGTAACCCCCGCTTCAGGGACAACCGTGTTCACGTCCTGCTCT
ACTTCATCACACCCACCGGCCATGGACTGCGTGAGCTGGACATCGAATTG
ATGAAGCGCCTTTCTCCCCGTGTCAACGTCATCCCCGTCATCGGCAAGGC
CGACTCTCTTACCCCTGCCGAATTGGCCGAATCCAAGAAGCTCATCATGG
AGGATATTGAGCACTACCGCATTCCCGTGTACAACTTCCCCTACGATATC
GAGGAGGACGATGAGGACACCGTGGAGGAGAATGCTGAGCTTCGTGGTCT
GATGCCGTTTGCCATTGTTGGCTCCGAGGACTTCGTTGAGATTGACGGCA
AGAAGGTGCGGGCCAGGCAATATCCTTGGGGTGTCGTGGACGTTGAGAAC
CCTCGTCACTCGGACTTCTTGGCCATCCGCAGCGCTCTTCTTCACAGCCA
TCTCGCAGACCTTAAGGAAATTACTCACGACTTCCTCTACGAAAACTACC
GTACTGAGAAGCTCAGCAAGAGTGTTGATGGTGCTACGCCAGCTGGAATT
GGACGACGAAGGCACCCGCATCTCCCTCACCATCGTTGATACCCCCGGTT
TCGGAGACCAGATTGACAACGAAGCAAGGACGTACCACCTTCGTCAACAC
TCTTTGTGGAAAGAAGGTCCTGGAAGGCAAGGACTGCGACGACCCGGCCA
ACGCTCACATTGAGGAGGGTGTCCGCATCAAGCCAGTCACAGTTGATGAA
GCTCCGTCGCAAGAAGAATGTCAAGAAGGGTATCCAGTTCTGCCTGATGG
TCTGTGGTGCCAGCGGAACCGATGTCGTTCAACGCGTACACAAGACTCTT
CGATGAACCCAGAAGACCTAGCATCCCAGTCCGTTAGACTGAAGGAGGAG
CAGCTTCGTCGCGAGGAGGAGAAGCTCCGTGAGATCGAACTCAAGGTGCA
GCGCGAGATCGCTGAGAAGCGACAGGAACTGCTGGCTCGTGAGAGTCAGC
TGAGGGAAATCGAGGCTCGCATGGCGCGTGAAGCAAGCCAGAGTCAGATT
GATAGCATCAGCGATGCTTGACTTCGGCGAAATTGTTGGATACCTTGAGC
GCCAATACGATGATATTCTTGCGGAGGAATCACGAATCAAGCGTAACCCC
CGCTTCAGGGACAACCGTGTTCACGTCCTGCTCTACTTCATCACACCCAC
CGGCCATGGACTGCGTGAGCTGGACATCGAATTGATGAAGCGCCTTTCTC
CCCGTGTCAACGTCATCCCCGTCATCGGCAAGGCCGACTCTCTTACCCCT
GCCGAATTGGCCGAATCCAAGAAGCTCATCATGGAGGATATTGAGCACTA
CCGCATTCCCGTGTACAACTTCCCCTACGATATCGAGGAGGACGATGAGG
ACACCGTGGAGGAGAATGCTGAGCTTCGTGGTCTGATGCCGTTTGCCATT
GTTGGCTCCGAGGACTTCGTTGAGATTGACGGCAAGAAGGTGCGGGCCAG
GCAATATCCTTGGGGTGTCGTGGACGTTGAGAACCCTCGTCACTCGGACT
TCTTGGCCATCCGCAGCGCTCTTCTTCACAGCCATCTCGCAGACCTTAAG
GAAATTACTCACGACTTCCTCTACGAAAACTACCGTACTGAGAAGCTCAG
CAAGAGTGTTGATGGTGCTACGCCAGCTGGAATTGGACGACGAAGGCACC
CGCATCTCCCTCACCATCGTTGATACCCCCGGTTTCGGAGACCAGATTGA
CAACGAAGCAAGGACGTACCACCTTCGTCAACACTCTTTGTGGAAAGAAG
GTCCTGGAAGGCAAGGACTGCGACGACCCGGCCAACGCTCACATTGAGGA
GGGTGTCCGCATCAAGCCAGTCACAGTTGATGAAGCTCCGTCGCAAGAAG
AATGTCAAGAAGGGTATCCAGTTCTGCCTGATGGTCTGTGGTGCCAGCGG
AACCGATGTCGTTCAACGCGTACACAAGACTCTTCGATGAACCCAGAAGA
CCTAGCATCCCAGTCCGTTAGACTGAAGGAGGAGCAGCTTCGTCGCGAGG
AGGAGAAGCTCCGTGAGATCGAACTCAAGGTGCAGCGCGAGATCGCTGAG
AAGCGACAGGAACTGCTGGCTCGTGAGAGTCAGCTGAGGGAAATCGAGGC
TCGCATGGCGCGTGAAGCAAGCCAGAGTCAGATTGATAGCATCAGCGATG
CTTGACTTCGGCGAAATTGTTGGATACCTTGAGCGCCAATACGATGATAT
TCTTGCGGAGGAATCACGAATCAAGCGTAACCCCCGCTTCAGGGACAACC
GTGTTCACGTCCTGCTCTACTTCATCACACCCACCGGCCATGGACTGCGT
GAGCTGGACATCGAATTGATGAAGCGCCTTTCTCCCCGTGTCAACGTCAT
CCCCGTCATCGGCAAGGCCGACTCTCTTACCCCTGCCGAATTGGCCGAAT
CCAAGAAGCTCATCATGGAGGATATTGAGCACTACCGCATTCCCGTGTAC
AACTTCCCCTACGATATCGAGGAGGACGATGAGGACACCGTGGAGGAGAA
TGCTGAGCTTCGTGGTCTGATGCCGTTTGCCATTGTTGGCTCCGAGGACT
TCGTTGAGATTGACGGCAAGAAGGTGCGGGCCAGGCAATATCCTTGGGGT
GTCGTGGACGTTGAGAACCCTCGTCACTCGGACTTCTTGGCCATCCGCAG
CGCTCTTCTTCACAGCCATCTCGCAGACCTTAAGGAAATTACTCACGACT
TCCTCTACGAAAACTACCGTACTGAGAAGCTCAGCAAGAGTGTTGATGGT
GCTACGCCAGCTGGAATTGGACGACGAAGGCACCCGCATCTCCCTCACCA
TCGTTGATACCCCCGGTTTCGGAGACCAGATTGACAACGAAGCAAGGACG
TACCACCTTCGTCAACACTCTTTGTGGAAAGAAGGTCCTGGAAGGCAAGG
ACTGCGACGACCCGGCCAACGCTCACATTGAGGAGGGTGTCCGCATCAAG
CCAGTCACAGTTGATGAAGCTCCGTCGCAAGAAGAATGTCAAGAAGGGTA
TCCAGTTCTGCCTGATGGTCTGTGGTGCCAGCGGAACCGATGTCGTTCAA
CGCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004936-T1.utr3p1 | KJC3_004936-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004936-T1.utr5p1 | KJC3_004936-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR030379 |
| DBxref | InterPro:IPR016491 |
| DBxref | PFAM:PF00735 |
| DBxref | PFAM:PF01926 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1166057..1168524 - |
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