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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1169172..1171426+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004937-T1 ID=KJC3_004937-T1|Name=KJC3_004937-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2255bp|location=Sequence derived from alignment at ch4:1169172..1171426+ (Aspergillus niger KJC3)
AGAGCGACAAGTCAACCGATTAAAAGCATAAGTGGTTGCTGCAATGTCTA
GCTAGCCTCTGTGCTCTCCCCAGTTCTTCTCAGGGGTCGGGGGCAGCAGA
AGGCGTTTCCACCGCCGCCGTGGGTCGCTGCGGGCCGCCGTAGCGGTAAG
CAATTACCCAAATACCATACAGCTTGATATTTTAGGCCTCAGGCCTGAAA
CAATGGCTCCGAGACATTTATTACTACGGAATACTATTCCTAACCGCAGA
GCTGTAGACTGACCGCGCGGGTTCGAATCACGCCCTTGTCAGTACATGCT
TTTTTCTTGATCTCGATCATCTTCACTGAAATACATTAAGAAGTTCCTTT
TCGGTTCCTGTATGGGTATATAGATGATGTGCATTGATCTCCGTTGAACA
ACATCACCACCCTACGCAGACAGTCTATTGGCCCGGAATCCGCTGCCCTT
CCGGCATCCCCCAGCCAAAAGCGGACCCCCGGGCCTTATCTACTTTACTG
ATGCTCGGGTGAGGTCAGCGACCGCTGTCGATCTTCTAGTTTCCTGTCTA
CCTTTCTACCATCCAAAGCTCTGATGGCCTCTTTCCCTGGTGGTCAGAAT
GAACACCCGACAAGTTATCGATGAGTCTGTGGGGCCACTCTCACTCTCTG
CTACATTCAACAATGATACCTCCTGCTTCGCAGTTGGCTTGGACACGGGC
TTCTGTGGTAGGTCCTGGCTATGCCCTTCATGCAATAGCTTCCCTTTCGG
GATACCCAAGCTAAAGACGTTATGATCTCTATTGCAGTCTTCAATACCGA
CCCATGCGAGCTCAGAGTATCAAGAGGTATAAATAATAGCATCGGCCCCG
CCCTCCTTCAGCTCCGTATCACTAATGCCGTTCACTCCATCTAGATTTCA
ATGCCGGCATCGGGGTGGTCAAGATGCTCGGCCAGACCAACTACCTAGCT
ATCGTTGGCGGAGGGAGACAGCCAAAGTTTCCACAGAATAAGGTGTGCGA
GCTTCTGCATCTATCTGGCGCAGCTTATACTCACACAGCGGTCGCAGTTG
GTTATCTGGGATGACGCAAGACAGAAAGCAGTAATTACGCTGGAGTTCCG
CACCTCGGTCCTGGGCGTCCGACTGTCCAAGTCGCGCATCGTTGTCGCCC
TCCTCAATAGCATCCACATTTTCGCTTTCTCGAACCCGCCGCAGAAGCTC
TCTTCTTTCGAGACAACGGATAACCCACTGGGGCTGGCTTGTCTAGGGCA
GGAGGTGCTCGCTTTCCCAGGTCGGTCCCCTGGCCAGGTCCAACTGGTGG
AGCTCGAAACGGGGAACGTCAGCATCATTCCTGCCCACAGCACGCCGTTG
CGCGCGATGACTTTGAGTCCCGATGGTGAAGTGTTGGCGACGGCGAGTGA
AGCGGTACGTCCCTGTCCCTACGATGGCGAATGCGACGCAGACTACTGAC
AAAGCGCATTCTATCTAGGGCACATTGGTCCGGGTCTTCTCTACGGCTAA
CTGCACCAAAATGGCCGAGCTACGACGCGGTGTTGATCATGCAGTGATAT
TTTCGCTTGCCATTTCGCCCTCGAATCTTCTACTGGCTGTGACATCTGAT
AAATCTACCCTGCACGTATTCGACCTTCCTCATCCTCGGCTACCCACAAA
CCGTACCCAAGCTGCAGCTTCCCCGACCGAAGAACCAACGAACCAGAAAT
GGGGCATTCTCGGGAAGATTCCACTATTGCCAAGGGTATTCTCTGATGTG
TATTCATTCGCAAGCGCCCACTTTGAGATGGGGGAAGAAGCACCACCTGG
CTCACATTATGTCCCGCCCCTGGGTAACTCATACGGGAGCCCCTCGAAAG
GCGTGATAGGTTGGCGCGATGATAGGACGATTCTTGTTATCGGTGCCGGC
AGGGATGGCCGGTGGGAGAAGTTCGTTCTGCGCGATGGGGATGATGGAAA
GCGGTATTGCCTGAGAGAAGGCTGGAAAAGATATTTGGGGGGCAGCTGAA
ATCCTCTTGTAAGGATGAAGAGTGATTGTTCGCAGGACTACCTATCCGGT
TTGCACCAAGGTAGTAGCTGTTCCAGATGCAGGCAAGATTCCGTATGCAA
ACGCGCATGCGCCCATGCCATAGCATTGATTCTGATATGGACACGATATC
GCATGAGCCGGCGCAGGATGAAGCAGCATATAGCATTTCAAGAATAGGCG
CTTGACTGCAGCCTTCGGCCACTAAGATCCTGGAGGTCTTGTATTGGATG
GCTTT back to topCoding sequence (CDS) from alignment at ch4:1169172..1171426+ >KJC3_004937-T1 ID=KJC3_004937-T1|Name=KJC3_004937-T1|organism=Aspergillus niger KJC3|type=CDS|length=5670bp|location=Sequence derived from alignment at ch4:1169172..1171426+ (Aspergillus niger KJC3)
ATGAACACCCGACAAGTTATCGATGAGTCTGTGGGGCCACTCTCACTCTC
TGCTACATTCAACAATGATACCTCCTGCTTCGCAGTTGGCTTGGACACGG
GCTTCTGTGTCTTCAATACCGACCCATGCGAGCTCAGAGTATCAAGAGAT
TTCAATGCCGGCATCGGGGTGGTCAAGATGCTCGGCCAGACCAACTACCT
AGCTATCGTTGGCGGAGGGAGACAGCCAAAGTTTCCACAGAATAAGTTGG
TTATCTGGGATGACGCAAGACAGAAAGCAGTAATTACGCTGGAGTTCCGC
ACCTCGGTCCTGGGCGTCCGACTGTCCAAGTCGCGCATCGTTGTCGCCCT
CCTCAATAGCATCCACATTTTCGCTTTCTCGAACCCGCCGCAGAAGCTCT
CTTCTTTCGAGACAACGGATAACCCACTGGGGCTGGCTTGTCTAGGGCAG
GAGGTGCTCGCTTTCCCAGGTCGGTCCCCTGGCCAGGTCCAACTGGTGGA
GCTCGAAACGGGGAACGTCAGCATCATTCCTGCCCACAGCACGCCGTTGC
GCGCGATGACTTTGAGTCCCGATGGTGAAGTGTTGGCGACGGCGAGTGAA
GCGGGCACATTGGTCCGGGTCTTCTCTACGGCTAACTGCACCAAAATGGC
CGAGCTACGACGCGGTGTTGATCATGCAGTGATATTTTCGCTTGCCATTT
CGCCCTCGAATCTTCTACTGGCTGTGACATCTGATAAATCTACCCTGCAC
GTATTCGACCTTCCTCATCCTCGGCTACCCACAAACCGTACCCAAGCTGC
AGCTTCCCCGACCGAAGAACCAACGAACCAGAAATGGGGCATTCTCGGGA
AGATTCCACTATTGCCAAGGGTATTCTCTGATGTGTATTCATTCGCAAGC
GCCCACTTTGAGATGGGGGAAGAAGCACCACCTGGCTCACATTATGTCCC
GCCCCTGGGTAACTCATACGGGAGCCCCTCGAAAGGCGTGATAGGTTGGC
GCGATGATAGGACGATTCTTGTTATCGGTGCCGGCAGGGATGGCCGGTGG
GAGAAGTTCGTTCTGCGCGATGGGGATGATGGAAAGCGGTATTGCCTGAG
AGAAGGCTGGAAAAGATATTTGGGGGGCAGCTGAATGAACACCCGACAAG
TTATCGATGAGTCTGTGGGGCCACTCTCACTCTCTGCTACATTCAACAAT
GATACCTCCTGCTTCGCAGTTGGCTTGGACACGGGCTTCTGTGTCTTCAA
TACCGACCCATGCGAGCTCAGAGTATCAAGAGATTTCAATGCCGGCATCG
GGGTGGTCAAGATGCTCGGCCAGACCAACTACCTAGCTATCGTTGGCGGA
GGGAGACAGCCAAAGTTTCCACAGAATAAGTTGGTTATCTGGGATGACGC
AAGACAGAAAGCAGTAATTACGCTGGAGTTCCGCACCTCGGTCCTGGGCG
TCCGACTGTCCAAGTCGCGCATCGTTGTCGCCCTCCTCAATAGCATCCAC
ATTTTCGCTTTCTCGAACCCGCCGCAGAAGCTCTCTTCTTTCGAGACAAC
GGATAACCCACTGGGGCTGGCTTGTCTAGGGCAGGAGGTGCTCGCTTTCC
CAGGTCGGTCCCCTGGCCAGGTCCAACTGGTGGAGCTCGAAACGGGGAAC
GTCAGCATCATTCCTGCCCACAGCACGCCGTTGCGCGCGATGACTTTGAG
TCCCGATGGTGAAGTGTTGGCGACGGCGAGTGAAGCGGGCACATTGGTCC
GGGTCTTCTCTACGGCTAACTGCACCAAAATGGCCGAGCTACGACGCGGT
GTTGATCATGCAGTGATATTTTCGCTTGCCATTTCGCCCTCGAATCTTCT
ACTGGCTGTGACATCTGATAAATCTACCCTGCACGTATTCGACCTTCCTC
ATCCTCGGCTACCCACAAACCGTACCCAAGCTGCAGCTTCCCCGACCGAA
GAACCAACGAACCAGAAATGGGGCATTCTCGGGAAGATTCCACTATTGCC
AAGGGTATTCTCTGATGTGTATTCATTCGCAAGCGCCCACTTTGAGATGG
GGGAAGAAGCACCACCTGGCTCACATTATGTCCCGCCCCTGGGTAACTCA
TACGGGAGCCCCTCGAAAGGCGTGATAGGTTGGCGCGATGATAGGACGAT
TCTTGTTATCGGTGCCGGCAGGGATGGCCGGTGGGAGAAGTTCGTTCTGC
GCGATGGGGATGATGGAAAGCGGTATTGCCTGAGAGAAGGCTGGAAAAGA
TATTTGGGGGGCAGCTGAATGAACACCCGACAAGTTATCGATGAGTCTGT
GGGGCCACTCTCACTCTCTGCTACATTCAACAATGATACCTCCTGCTTCG
CAGTTGGCTTGGACACGGGCTTCTGTGTCTTCAATACCGACCCATGCGAG
CTCAGAGTATCAAGAGATTTCAATGCCGGCATCGGGGTGGTCAAGATGCT
CGGCCAGACCAACTACCTAGCTATCGTTGGCGGAGGGAGACAGCCAAAGT
TTCCACAGAATAAGTTGGTTATCTGGGATGACGCAAGACAGAAAGCAGTA
ATTACGCTGGAGTTCCGCACCTCGGTCCTGGGCGTCCGACTGTCCAAGTC
GCGCATCGTTGTCGCCCTCCTCAATAGCATCCACATTTTCGCTTTCTCGA
ACCCGCCGCAGAAGCTCTCTTCTTTCGAGACAACGGATAACCCACTGGGG
CTGGCTTGTCTAGGGCAGGAGGTGCTCGCTTTCCCAGGTCGGTCCCCTGG
CCAGGTCCAACTGGTGGAGCTCGAAACGGGGAACGTCAGCATCATTCCTG
CCCACAGCACGCCGTTGCGCGCGATGACTTTGAGTCCCGATGGTGAAGTG
TTGGCGACGGCGAGTGAAGCGGGCACATTGGTCCGGGTCTTCTCTACGGC
TAACTGCACCAAAATGGCCGAGCTACGACGCGGTGTTGATCATGCAGTGA
TATTTTCGCTTGCCATTTCGCCCTCGAATCTTCTACTGGCTGTGACATCT
GATAAATCTACCCTGCACGTATTCGACCTTCCTCATCCTCGGCTACCCAC
AAACCGTACCCAAGCTGCAGCTTCCCCGACCGAAGAACCAACGAACCAGA
AATGGGGCATTCTCGGGAAGATTCCACTATTGCCAAGGGTATTCTCTGAT
GTGTATTCATTCGCAAGCGCCCACTTTGAGATGGGGGAAGAAGCACCACC
TGGCTCACATTATGTCCCGCCCCTGGGTAACTCATACGGGAGCCCCTCGA
AAGGCGTGATAGGTTGGCGCGATGATAGGACGATTCTTGTTATCGGTGCC
GGCAGGGATGGCCGGTGGGAGAAGTTCGTTCTGCGCGATGGGGATGATGG
AAAGCGGTATTGCCTGAGAGAAGGCTGGAAAAGATATTTGGGGGGCAGCT
GAATGAACACCCGACAAGTTATCGATGAGTCTGTGGGGCCACTCTCACTC
TCTGCTACATTCAACAATGATACCTCCTGCTTCGCAGTTGGCTTGGACAC
GGGCTTCTGTGTCTTCAATACCGACCCATGCGAGCTCAGAGTATCAAGAG
ATTTCAATGCCGGCATCGGGGTGGTCAAGATGCTCGGCCAGACCAACTAC
CTAGCTATCGTTGGCGGAGGGAGACAGCCAAAGTTTCCACAGAATAAGTT
GGTTATCTGGGATGACGCAAGACAGAAAGCAGTAATTACGCTGGAGTTCC
GCACCTCGGTCCTGGGCGTCCGACTGTCCAAGTCGCGCATCGTTGTCGCC
CTCCTCAATAGCATCCACATTTTCGCTTTCTCGAACCCGCCGCAGAAGCT
CTCTTCTTTCGAGACAACGGATAACCCACTGGGGCTGGCTTGTCTAGGGC
AGGAGGTGCTCGCTTTCCCAGGTCGGTCCCCTGGCCAGGTCCAACTGGTG
GAGCTCGAAACGGGGAACGTCAGCATCATTCCTGCCCACAGCACGCCGTT
GCGCGCGATGACTTTGAGTCCCGATGGTGAAGTGTTGGCGACGGCGAGTG
AAGCGGGCACATTGGTCCGGGTCTTCTCTACGGCTAACTGCACCAAAATG
GCCGAGCTACGACGCGGTGTTGATCATGCAGTGATATTTTCGCTTGCCAT
TTCGCCCTCGAATCTTCTACTGGCTGTGACATCTGATAAATCTACCCTGC
ACGTATTCGACCTTCCTCATCCTCGGCTACCCACAAACCGTACCCAAGCT
GCAGCTTCCCCGACCGAAGAACCAACGAACCAGAAATGGGGCATTCTCGG
GAAGATTCCACTATTGCCAAGGGTATTCTCTGATGTGTATTCATTCGCAA
GCGCCCACTTTGAGATGGGGGAAGAAGCACCACCTGGCTCACATTATGTC
CCGCCCCTGGGTAACTCATACGGGAGCCCCTCGAAAGGCGTGATAGGTTG
GCGCGATGATAGGACGATTCTTGTTATCGGTGCCGGCAGGGATGGCCGGT
GGGAGAAGTTCGTTCTGCGCGATGGGGATGATGGAAAGCGGTATTGCCTG
AGAGAAGGCTGGAAAAGATATTTGGGGGGCAGCTGAATGAACACCCGACA
AGTTATCGATGAGTCTGTGGGGCCACTCTCACTCTCTGCTACATTCAACA
ATGATACCTCCTGCTTCGCAGTTGGCTTGGACACGGGCTTCTGTGTCTTC
AATACCGACCCATGCGAGCTCAGAGTATCAAGAGATTTCAATGCCGGCAT
CGGGGTGGTCAAGATGCTCGGCCAGACCAACTACCTAGCTATCGTTGGCG
GAGGGAGACAGCCAAAGTTTCCACAGAATAAGTTGGTTATCTGGGATGAC
GCAAGACAGAAAGCAGTAATTACGCTGGAGTTCCGCACCTCGGTCCTGGG
CGTCCGACTGTCCAAGTCGCGCATCGTTGTCGCCCTCCTCAATAGCATCC
ACATTTTCGCTTTCTCGAACCCGCCGCAGAAGCTCTCTTCTTTCGAGACA
ACGGATAACCCACTGGGGCTGGCTTGTCTAGGGCAGGAGGTGCTCGCTTT
CCCAGGTCGGTCCCCTGGCCAGGTCCAACTGGTGGAGCTCGAAACGGGGA
ACGTCAGCATCATTCCTGCCCACAGCACGCCGTTGCGCGCGATGACTTTG
AGTCCCGATGGTGAAGTGTTGGCGACGGCGAGTGAAGCGGGCACATTGGT
CCGGGTCTTCTCTACGGCTAACTGCACCAAAATGGCCGAGCTACGACGCG
GTGTTGATCATGCAGTGATATTTTCGCTTGCCATTTCGCCCTCGAATCTT
CTACTGGCTGTGACATCTGATAAATCTACCCTGCACGTATTCGACCTTCC
TCATCCTCGGCTACCCACAAACCGTACCCAAGCTGCAGCTTCCCCGACCG
AAGAACCAACGAACCAGAAATGGGGCATTCTCGGGAAGATTCCACTATTG
CCAAGGGTATTCTCTGATGTGTATTCATTCGCAAGCGCCCACTTTGAGAT
GGGGGAAGAAGCACCACCTGGCTCACATTATGTCCCGCCCCTGGGTAACT
CATACGGGAGCCCCTCGAAAGGCGTGATAGGTTGGCGCGATGATAGGACG
ATTCTTGTTATCGGTGCCGGCAGGGATGGCCGGTGGGAGAAGTTCGTTCT
GCGCGATGGGGATGATGGAAAGCGGTATTGCCTGAGAGAAGGCTGGAAAA
GATATTTGGGGGGCAGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004937-T1.utr3p1 | KJC3_004937-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| Product | 5-bisphosphate-binding protein |
| Product | Phosphatidylinositol 3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1169172..1171426 + |
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