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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1223875..1224867+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004964-T1 ID=KJC3_004964-T1|Name=KJC3_004964-T1|organism=Aspergillus niger KJC3|type=mRNA|length=993bp|location=Sequence derived from alignment at ch4:1223875..1224867+ (Aspergillus niger KJC3)
ATGGCCACTGTGAAATCCACTTCCAGCGCCCCAAAAGGCAACGCTTTCGT
TGGAACCGAAGGGATTTATAACCTCCCTCACCACCAACGGGAGATCGATC
GTCTGCAACGGCAGCACAACTTAATTCTGTCGTCTACAGGAGGTCTTCTC
CTGAGCACGCCGCTGGAGAGCAATGCAACCCTGAGGATTCTGGATGCTGG
TGCAGCGGACGGTAAGTGGAAAGGAGAGAGCCCATATATCCTCGATAGAA
TTGCGTTGATCGATGAGTCTGGAGCAGGAACCTGGCTTCGTTCTCTAGCA
GAGCACTATCCCAATCAGAAATGGTCCCTTCATGGCATCGACATTGGCTC
CGCGCTTTTCCCGCCCCCATCTGCCGATGGACCGATTGTGGATCTTCAGA
AACATGATGTCCGCGAGCCAATTCCAGAGCATCTGCACCTACCAGAGACC
TTCGACATCATTCATCAACGATATCTTATATGGGGCCTGAAAAGCGCGGA
ATGGTCACAGGCCTTGGGAAACTTGCGTTCAGTGTTGAAGCCTGGAGGCT
GGATTCAGCTCGTAGAAGCCCAATGGGTAGATCGTGACGCACCATTTGAC
CCTGTTGAGTTCCCTAACCTCGCTAAGATGTCGGAAATGCAAAAGTGGAG
TACTGATGCTTTCGGAATGAATGCCTATATTGCTTATGAGCTGGAGGAAT
TGCTGCGACACTCTGGGTTCGTGAACATCACCAAGACCTCGTTCGCTATA
GGGTATGGTGCAGTAGCTAGAGAGGAGCAGTGGAAAGTGACCTCTGCTTG
GTTATTGGTGGAAGGATACCGCAGCCTCGGGCATAAGATGCCTCCTGGTG
GTATTCCTGGGGTGGCGAGGACTCCGGCTGAGTTCGATGCTTTCTTGGAC
GATTTGCGGGACGAGGTGTTAAGACATGGATATGCGCCTCAGCTGAACAT
TGTCATTGGGCAGAAGCCTCGGAACCAGCTTAGCCACCTCTGA back to topCoding sequence (CDS) from alignment at ch4:1223875..1224867+ >KJC3_004964-T1 ID=KJC3_004964-T1|Name=KJC3_004964-T1|organism=Aspergillus niger KJC3|type=CDS|length=1854bp|location=Sequence derived from alignment at ch4:1223875..1224867+ (Aspergillus niger KJC3)
ATGGCCACTGTGAAATCCACTTCCAGCGCCCCAAAAGGCAACGCTTTCGT
TGGAACCGAAGGGATTTATAACCTCCCTCACCACCAACGGGAGATCGATC
GTCTGCAACGGCAGCACAACTTAATTCTGTCGTCTACAGGAGGTCTTCTC
CTGAGCACGCCGCTGGAGAGCAATGCAACCCTGAGGATTCTGGATGCTGG
TGCAGCGGACGGAACCTGGCTTCGTTCTCTAGCAGAGCACTATCCCAATC
AGAAATGGTCCCTTCATGGCATCGACATTGGCTCCGCGCTTTTCCCGCCC
CCATCTGCCGATGGACCGATTGTGGATCTTCAGAAACATGATGTCCGCGA
GCCAATTCCAGAGCATCTGCACCTACCAGAGACCTTCGACATCATTCATC
AACGATATCTTATATGGGGCCTGAAAAGCGCGGAATGGTCACAGGCCTTG
GGAAACTTGCGTTCAGTGTTGAAGCCTGGAGGCTGGATTCAGCTCGTAGA
AGCCCAATGGGTAGATCGTGACGCACCATTTGACCCTGTTGAGTTCCCTA
ACCTCGCTAAGATGTCGGAAATGCAAAAGTGGAGTACTGATGCTTTCGGA
ATGAATGCCTATATTGCTTATGAGCTGGAGGAATTGCTGCGACACTCTGG
GTTCGTGAACATCACCAAGACCTCGTTCGCTATAGGGTATGGTGCAGTAG
CTAGAGAGGAGCAGTGGAAAGTGACCTCTGCTTGGTTATTGGTGGAAGGA
TACCGCAGCCTCGGGCATAAGATGCCTCCTGGTGGTATTCCTGGGGTGGC
GAGGACTCCGGCTGAGTTCGATGCTTTCTTGGACGATTTGCGGGACGAGG
TGTTAAGACATGGATATGCGCCTCAGCTGAACATTGTCATTGGGCAGAAG
CCTCGGAACCAGCTTAGCCACCTCTGAATGGCCACTGTGAAATCCACTTC
CAGCGCCCCAAAAGGCAACGCTTTCGTTGGAACCGAAGGGATTTATAACC
TCCCTCACCACCAACGGGAGATCGATCGTCTGCAACGGCAGCACAACTTA
ATTCTGTCGTCTACAGGAGGTCTTCTCCTGAGCACGCCGCTGGAGAGCAA
TGCAACCCTGAGGATTCTGGATGCTGGTGCAGCGGACGGAACCTGGCTTC
GTTCTCTAGCAGAGCACTATCCCAATCAGAAATGGTCCCTTCATGGCATC
GACATTGGCTCCGCGCTTTTCCCGCCCCCATCTGCCGATGGACCGATTGT
GGATCTTCAGAAACATGATGTCCGCGAGCCAATTCCAGAGCATCTGCACC
TACCAGAGACCTTCGACATCATTCATCAACGATATCTTATATGGGGCCTG
AAAAGCGCGGAATGGTCACAGGCCTTGGGAAACTTGCGTTCAGTGTTGAA
GCCTGGAGGCTGGATTCAGCTCGTAGAAGCCCAATGGGTAGATCGTGACG
CACCATTTGACCCTGTTGAGTTCCCTAACCTCGCTAAGATGTCGGAAATG
CAAAAGTGGAGTACTGATGCTTTCGGAATGAATGCCTATATTGCTTATGA
GCTGGAGGAATTGCTGCGACACTCTGGGTTCGTGAACATCACCAAGACCT
CGTTCGCTATAGGGTATGGTGCAGTAGCTAGAGAGGAGCAGTGGAAAGTG
ACCTCTGCTTGGTTATTGGTGGAAGGATACCGCAGCCTCGGGCATAAGAT
GCCTCCTGGTGGTATTCCTGGGGTGGCGAGGACTCCGGCTGAGTTCGATG
CTTTCTTGGACGATTTGCGGGACGAGGTGTTAAGACATGGATATGCGCCT
CAGCTGAACATTGTCATTGGGCAGAAGCCTCGGAACCAGCTTAGCCACCT
CTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1223875..1224867 + |
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