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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1234267..1236308+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004968-T1 ID=KJC3_004968-T1|Name=KJC3_004968-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2042bp|location=Sequence derived from alignment at ch4:1234267..1236308+ (Aspergillus niger KJC3)
GATTTTAGCTGGAATATTTCTACCGCCGTGAGATAGAGACATTTGAGATC
CTCGATCAAACGACGCTTGCTTCGGCTTTATCCGCTTCTTTATTTTACCG
GTGTCTTTTTCTTTGAAGCTTTAAATCCGTCCCTCCGTCCGCCTCCATTG
CGATCTCTATGTACTTTCCCCTTTCTCTCAAAGAGCCTCTCTCCTGAACT
TGAAGAACAAGGACTTAAGCTCCTAGACAAAGAACAAAGATGGAAGCTCT
TGCCCAAGAAATTCGCAGACTGGTCGAAGCTGGTGATGAAAAGACTCGCA
AAGATGTCTTGGATGCCCTACAGAAGCTGAGTGTCTCAATTGAGACTCCG
GACGACACTGTGCAGCGACTTACATTCTATGTACGTCTTTCTGCGCAATG
CCCTCCCCCATTCCAAACAATCACAACAAGAAGTTGAGATATACAGTTCT
GAAACTAATCATACTTCGTCAAGGACATGCAACTGGCCGGAATTCGTATT
GGCATTGACCTGAAGCTCTTCGAGCTATTGCTTGAGGGTCCCCTTACTGT
GGATGAGCTGAGCCAGAAGACGGGAGCCAATCCGGTCTTCCTCGGTAAGA
TTTTGATCAATATCTCTTCAACGCGGATCTAATCTAAGCCTATCAGCTCG
TCTCTTGCGCTACTTGGCATCTTATTATGCAGTCGAGGAAGTCTCCAAAG
ATACCTTTACTGCATCGAGTATATCGAAGACGTTTGCCGTATCTGGCCAT
CAAGCTGCGGTTGGTCATATGTAAGTCGACTGTCTATCCCTTTATATTTA
TGTACAATAAGAACTAACTTTACACTGATCAGGTGGAACAACTGCGGTCA
GATTATTCAAGTGCTTCCTAGTTGGCTCAAGGAGAACAATTATCCTGATA
TTCAGGACAATGTCAAAACTCCTTTCCAGAAAGCTCTCAACACCGATGTA
CCTGCTTTCATCTACATGCAGCAGAATCCTGAGGCTCTAGGCTATTTTGT
TGAGCATATGATGGCTAACCGCGCCGGTATGCCTACTTTTCTGGACGCCT
ATCCAGTCTTGGAAAAAGCTACCGGTCTGAGCCCTGAAAGAGCCCTGTTC
GTTGATATTGGAGGTGGCTTGGGACACCAAGCGATTAGCTTCAAGCAGCG
CTACCCCCAGCTGGAGGGCCGAGTGATCGTCCAGGACCTTTCCCAAACCT
TAGCTCACGCTATTGAGTTCCCTGGGGTAGAGAAACAGGTGTATGACTTC
TTCACACCCCAGGTTGTGAAAGGTACAGTCCTTCTCTCAGCGCTATCTTC
CCCCCTTCATTGAGACTGATCCGTGTACAATTCAGGTGCGAAATTTTACT
ATCTGCGGAATATCTTCCATGACTGGCCCGACCATAAAGTCCTAGAGATT
ATCAGAAATACAATCGAAGCCATGGCACCGGACTCATTTCTCTTGATTGA
CGAGATGGTACTGCCCAACACCGGGGTTCACTGGCAGCAGGCGCAATTGG
ATATGTTGATGATGGCTACCCTAGGTGCCCGGGAACGCACGGAGGAGCAG
TGGTATCGTCTGGCAGAAGAGGCTGGGCTGTCTCTCAACAAAGTCTACAC
CTATACGGTGAGCTTGCGGGACAGTATCATTGAGGCTGTGCCCAAGGCCT
AGTTTGCCTTTGTCGCTACCGTGGCCTCGTCGGGGTCCTGCACCGGCTGT
ATCTGCGCTACTTTCTTGTCGGCTGTGGCGGGTCTGCCCTCTGCGTGGCA
CTCATCCTCTCGGACCGAGCGGCGTAGCTAACTACCTAATGTCAGCTTGA
CTAAGGAACTGTTGTGGATCTACTACCCCGGGCTGGGGTGGTCTGGATCG
CCGCTCGATCGAACCCCTTCTTGACCGGAGTATTATAGTAATATTACGGT
AAAACCGTGTTATGGACAGTACATTCGGACGCCGAGTTCAGTTCAGATTC
TCAGAGGTCGAGGAAATGCTAGATAAGTACTCCTATATTTGGAGTCAAGA
AGATACCGCGTTTACCCATATCGAGGAATTACTTAAACAAGG back to topCoding sequence (CDS) from alignment at ch4:1234267..1236308+ >KJC3_004968-T1 ID=KJC3_004968-T1|Name=KJC3_004968-T1|organism=Aspergillus niger KJC3|type=CDS|length=5715bp|location=Sequence derived from alignment at ch4:1234267..1236308+ (Aspergillus niger KJC3)
ATGGAAGCTCTTGCCCAAGAAATTCGCAGACTGGTCGAAGCTGGTGATGA
AAAGACTCGCAAAGATGTCTTGGATGCCCTACAGAAGCTGAGTGTCTCAA
TTGAGACTCCGGACGACACTGTGCAGCGACTTACATTCTATGACATGCAA
CTGGCCGGAATTCGTATTGGCATTGACCTGAAGCTCTTCGAGCTATTGCT
TGAGGGTCCCCTTACTGTGGATGAGCTGAGCCAGAAGACGGGAGCCAATC
CGGTCTTCCTCGCTCGTCTCTTGCGCTACTTGGCATCTTATTATGCAGTC
GAGGAAGTCTCCAAAGATACCTTTACTGCATCGAGTATATCGAAGACGTT
TGCCGTATCTGGCCATCAAGCTGCGGTTGGTCATATGTGGAACAACTGCG
GTCAGATTATTCAAGTGCTTCCTAGTTGGCTCAAGGAGAACAATTATCCT
GATATTCAGGACAATGTCAAAACTCCTTTCCAGAAAGCTCTCAACACCGA
TGTACCTGCTTTCATCTACATGCAGCAGAATCCTGAGGCTCTAGGCTATT
TTGTTGAGCATATGATGGCTAACCGCGCCGGTATGCCTACTTTTCTGGAC
GCCTATCCAGTCTTGGAAAAAGCTACCGGTCTGAGCCCTGAAAGAGCCCT
GTTCGTTGATATTGGAGGTGGCTTGGGACACCAAGCGATTAGCTTCAAGC
AGCGCTACCCCCAGCTGGAGGGCCGAGTGATCGTCCAGGACCTTTCCCAA
ACCTTAGCTCACGCTATTGAGTTCCCTGGGGTAGAGAAACAGGTGTATGA
CTTCTTCACACCCCAGGTTGTGAAAGGTGCGAAATTTTACTATCTGCGGA
ATATCTTCCATGACTGGCCCGACCATAAAGTCCTAGAGATTATCAGAAAT
ACAATCGAAGCCATGGCACCGGACTCATTTCTCTTGATTGACGAGATGGT
ACTGCCCAACACCGGGGTTCACTGGCAGCAGGCGCAATTGGATATGTTGA
TGATGGCTACCCTAGGTGCCCGGGAACGCACGGAGGAGCAGTGGTATCGT
CTGGCAGAAGAGGCTGGGCTGTCTCTCAACAAAGTCTACACCTATACGGT
GAGCTTGCGGGACAGTATCATTGAGGCTGTGCCCAAGGCCTAGATGGAAG
CTCTTGCCCAAGAAATTCGCAGACTGGTCGAAGCTGGTGATGAAAAGACT
CGCAAAGATGTCTTGGATGCCCTACAGAAGCTGAGTGTCTCAATTGAGAC
TCCGGACGACACTGTGCAGCGACTTACATTCTATGACATGCAACTGGCCG
GAATTCGTATTGGCATTGACCTGAAGCTCTTCGAGCTATTGCTTGAGGGT
CCCCTTACTGTGGATGAGCTGAGCCAGAAGACGGGAGCCAATCCGGTCTT
CCTCGCTCGTCTCTTGCGCTACTTGGCATCTTATTATGCAGTCGAGGAAG
TCTCCAAAGATACCTTTACTGCATCGAGTATATCGAAGACGTTTGCCGTA
TCTGGCCATCAAGCTGCGGTTGGTCATATGTGGAACAACTGCGGTCAGAT
TATTCAAGTGCTTCCTAGTTGGCTCAAGGAGAACAATTATCCTGATATTC
AGGACAATGTCAAAACTCCTTTCCAGAAAGCTCTCAACACCGATGTACCT
GCTTTCATCTACATGCAGCAGAATCCTGAGGCTCTAGGCTATTTTGTTGA
GCATATGATGGCTAACCGCGCCGGTATGCCTACTTTTCTGGACGCCTATC
CAGTCTTGGAAAAAGCTACCGGTCTGAGCCCTGAAAGAGCCCTGTTCGTT
GATATTGGAGGTGGCTTGGGACACCAAGCGATTAGCTTCAAGCAGCGCTA
CCCCCAGCTGGAGGGCCGAGTGATCGTCCAGGACCTTTCCCAAACCTTAG
CTCACGCTATTGAGTTCCCTGGGGTAGAGAAACAGGTGTATGACTTCTTC
ACACCCCAGGTTGTGAAAGGTGCGAAATTTTACTATCTGCGGAATATCTT
CCATGACTGGCCCGACCATAAAGTCCTAGAGATTATCAGAAATACAATCG
AAGCCATGGCACCGGACTCATTTCTCTTGATTGACGAGATGGTACTGCCC
AACACCGGGGTTCACTGGCAGCAGGCGCAATTGGATATGTTGATGATGGC
TACCCTAGGTGCCCGGGAACGCACGGAGGAGCAGTGGTATCGTCTGGCAG
AAGAGGCTGGGCTGTCTCTCAACAAAGTCTACACCTATACGGTGAGCTTG
CGGGACAGTATCATTGAGGCTGTGCCCAAGGCCTAGATGGAAGCTCTTGC
CCAAGAAATTCGCAGACTGGTCGAAGCTGGTGATGAAAAGACTCGCAAAG
ATGTCTTGGATGCCCTACAGAAGCTGAGTGTCTCAATTGAGACTCCGGAC
GACACTGTGCAGCGACTTACATTCTATGACATGCAACTGGCCGGAATTCG
TATTGGCATTGACCTGAAGCTCTTCGAGCTATTGCTTGAGGGTCCCCTTA
CTGTGGATGAGCTGAGCCAGAAGACGGGAGCCAATCCGGTCTTCCTCGCT
CGTCTCTTGCGCTACTTGGCATCTTATTATGCAGTCGAGGAAGTCTCCAA
AGATACCTTTACTGCATCGAGTATATCGAAGACGTTTGCCGTATCTGGCC
ATCAAGCTGCGGTTGGTCATATGTGGAACAACTGCGGTCAGATTATTCAA
GTGCTTCCTAGTTGGCTCAAGGAGAACAATTATCCTGATATTCAGGACAA
TGTCAAAACTCCTTTCCAGAAAGCTCTCAACACCGATGTACCTGCTTTCA
TCTACATGCAGCAGAATCCTGAGGCTCTAGGCTATTTTGTTGAGCATATG
ATGGCTAACCGCGCCGGTATGCCTACTTTTCTGGACGCCTATCCAGTCTT
GGAAAAAGCTACCGGTCTGAGCCCTGAAAGAGCCCTGTTCGTTGATATTG
GAGGTGGCTTGGGACACCAAGCGATTAGCTTCAAGCAGCGCTACCCCCAG
CTGGAGGGCCGAGTGATCGTCCAGGACCTTTCCCAAACCTTAGCTCACGC
TATTGAGTTCCCTGGGGTAGAGAAACAGGTGTATGACTTCTTCACACCCC
AGGTTGTGAAAGGTGCGAAATTTTACTATCTGCGGAATATCTTCCATGAC
TGGCCCGACCATAAAGTCCTAGAGATTATCAGAAATACAATCGAAGCCAT
GGCACCGGACTCATTTCTCTTGATTGACGAGATGGTACTGCCCAACACCG
GGGTTCACTGGCAGCAGGCGCAATTGGATATGTTGATGATGGCTACCCTA
GGTGCCCGGGAACGCACGGAGGAGCAGTGGTATCGTCTGGCAGAAGAGGC
TGGGCTGTCTCTCAACAAAGTCTACACCTATACGGTGAGCTTGCGGGACA
GTATCATTGAGGCTGTGCCCAAGGCCTAGATGGAAGCTCTTGCCCAAGAA
ATTCGCAGACTGGTCGAAGCTGGTGATGAAAAGACTCGCAAAGATGTCTT
GGATGCCCTACAGAAGCTGAGTGTCTCAATTGAGACTCCGGACGACACTG
TGCAGCGACTTACATTCTATGACATGCAACTGGCCGGAATTCGTATTGGC
ATTGACCTGAAGCTCTTCGAGCTATTGCTTGAGGGTCCCCTTACTGTGGA
TGAGCTGAGCCAGAAGACGGGAGCCAATCCGGTCTTCCTCGCTCGTCTCT
TGCGCTACTTGGCATCTTATTATGCAGTCGAGGAAGTCTCCAAAGATACC
TTTACTGCATCGAGTATATCGAAGACGTTTGCCGTATCTGGCCATCAAGC
TGCGGTTGGTCATATGTGGAACAACTGCGGTCAGATTATTCAAGTGCTTC
CTAGTTGGCTCAAGGAGAACAATTATCCTGATATTCAGGACAATGTCAAA
ACTCCTTTCCAGAAAGCTCTCAACACCGATGTACCTGCTTTCATCTACAT
GCAGCAGAATCCTGAGGCTCTAGGCTATTTTGTTGAGCATATGATGGCTA
ACCGCGCCGGTATGCCTACTTTTCTGGACGCCTATCCAGTCTTGGAAAAA
GCTACCGGTCTGAGCCCTGAAAGAGCCCTGTTCGTTGATATTGGAGGTGG
CTTGGGACACCAAGCGATTAGCTTCAAGCAGCGCTACCCCCAGCTGGAGG
GCCGAGTGATCGTCCAGGACCTTTCCCAAACCTTAGCTCACGCTATTGAG
TTCCCTGGGGTAGAGAAACAGGTGTATGACTTCTTCACACCCCAGGTTGT
GAAAGGTGCGAAATTTTACTATCTGCGGAATATCTTCCATGACTGGCCCG
ACCATAAAGTCCTAGAGATTATCAGAAATACAATCGAAGCCATGGCACCG
GACTCATTTCTCTTGATTGACGAGATGGTACTGCCCAACACCGGGGTTCA
CTGGCAGCAGGCGCAATTGGATATGTTGATGATGGCTACCCTAGGTGCCC
GGGAACGCACGGAGGAGCAGTGGTATCGTCTGGCAGAAGAGGCTGGGCTG
TCTCTCAACAAAGTCTACACCTATACGGTGAGCTTGCGGGACAGTATCAT
TGAGGCTGTGCCCAAGGCCTAGATGGAAGCTCTTGCCCAAGAAATTCGCA
GACTGGTCGAAGCTGGTGATGAAAAGACTCGCAAAGATGTCTTGGATGCC
CTACAGAAGCTGAGTGTCTCAATTGAGACTCCGGACGACACTGTGCAGCG
ACTTACATTCTATGACATGCAACTGGCCGGAATTCGTATTGGCATTGACC
TGAAGCTCTTCGAGCTATTGCTTGAGGGTCCCCTTACTGTGGATGAGCTG
AGCCAGAAGACGGGAGCCAATCCGGTCTTCCTCGCTCGTCTCTTGCGCTA
CTTGGCATCTTATTATGCAGTCGAGGAAGTCTCCAAAGATACCTTTACTG
CATCGAGTATATCGAAGACGTTTGCCGTATCTGGCCATCAAGCTGCGGTT
GGTCATATGTGGAACAACTGCGGTCAGATTATTCAAGTGCTTCCTAGTTG
GCTCAAGGAGAACAATTATCCTGATATTCAGGACAATGTCAAAACTCCTT
TCCAGAAAGCTCTCAACACCGATGTACCTGCTTTCATCTACATGCAGCAG
AATCCTGAGGCTCTAGGCTATTTTGTTGAGCATATGATGGCTAACCGCGC
CGGTATGCCTACTTTTCTGGACGCCTATCCAGTCTTGGAAAAAGCTACCG
GTCTGAGCCCTGAAAGAGCCCTGTTCGTTGATATTGGAGGTGGCTTGGGA
CACCAAGCGATTAGCTTCAAGCAGCGCTACCCCCAGCTGGAGGGCCGAGT
GATCGTCCAGGACCTTTCCCAAACCTTAGCTCACGCTATTGAGTTCCCTG
GGGTAGAGAAACAGGTGTATGACTTCTTCACACCCCAGGTTGTGAAAGGT
GCGAAATTTTACTATCTGCGGAATATCTTCCATGACTGGCCCGACCATAA
AGTCCTAGAGATTATCAGAAATACAATCGAAGCCATGGCACCGGACTCAT
TTCTCTTGATTGACGAGATGGTACTGCCCAACACCGGGGTTCACTGGCAG
CAGGCGCAATTGGATATGTTGATGATGGCTACCCTAGGTGCCCGGGAACG
CACGGAGGAGCAGTGGTATCGTCTGGCAGAAGAGGCTGGGCTGTCTCTCA
ACAAAGTCTACACCTATACGGTGAGCTTGCGGGACAGTATCATTGAGGCT
GTGCCCAAGGCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008171 | O-methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004968-T1.utr5p1 | KJC3_004968-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004968-T1.utr3p1 | KJC3_004968-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR016461 |
| DBxref | InterPro:IPR001077 |
| DBxref | PFAM:PF00891 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1234267..1236308 + |
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