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KJC3_004969-T1, KJC3_004969-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004969-T1
Unique NameKJC3_004969-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1237741..1238830+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004969-T1 ID=KJC3_004969-T1|Name=KJC3_004969-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1090bp|location=Sequence derived from alignment at ch4:1237741..1238830+ (Aspergillus niger KJC3)
GTCCCGCCTCCCGCCGAGCCGCACGCATGCATGCATCAACCATCATCCCC
ACACCTCCTTAAACTTACCTAACCACACCCCAATCTCTCTCATCCCCGAA
ACCCGATTCCATCCCATCATCCCCAAAGAAAAAGGAACCTCTCAGAATGG
ACCCAGAAACAGACCCCTCCAATCCCCCCGTAATCAACTACATTCTCTCC
TTCCTTCTAGTCGGGGTAGCCTGGGGCTTCACAACCCCTTTCATCCGGCG
CGCAGCCGCGGACTTTGCAGCCCGCCAACAGCAAAACCAGCAACAGGACG
ACAACAACAACAACATCAGCATCAACAGTAATGACAATGTTCCTCTGACA
TCTGTTACTCCCGAATACACCGATGAAGCACGTCCCGAAGAAGGAGGAGA
AGAAAGCGAGGAAGATAATCCTCCCCCAGCCACCCACCAAGAACAACAGC
AGCAGCAACAGCAACAACCAGCATGGATGCAGCAAAACCAGCAGAAACCT
CCCTCCTGGCTGCGCAAAAAGATCGCTACTTTATTCTGGACAGTGGTGAA
TTTGCTTCGCACGCCTGCGTACTCTATCCCCCTCGTTGTGAATTTAACGG
GGAGTGTGTGGTTCTTTTTGTTGGTGGGGAAGCATGGTATGTTTTCTATT
TTATTCCATAGACCTAATTTATTTTTGGAGGTGATATGTGGTAGTAGTAT
GGATGTGAGGATATACTAATGATGATGTATAGAGTTATCGTTGACCGTTC
CCCTCGCCAACTCTAGTGCCTTTTTGTTCACGGTGCTCGGGGAATGGTAT
GTGGAGAGGAAGGTCATTGAGCGCGAAACGTGGTTGGGGATGGCGTTGGT
GTTGGGCGGGATTGCGCTTTGTGTTATGGCTTAGCTTTTTCCTTTTTTTA
TTAGTCTTTAACGTGATTTATGGGTTTGTAGGGGTGTTATCGTATAGTAG
TATCTCAAGTTGGTGTGGTTGTTGATTGGTTGAAGTTGAAGGGAGGAAAA
AATAAAACACAAAAAGATGTGCATCATCCGTGAATCGAACACGGGCCTCA
TCGATGGCAACGATGAATTCTACCACTAGACCAATGATGC
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Coding sequence (CDS) from alignment at ch4:1237741..1238830+

>KJC3_004969-T1 ID=KJC3_004969-T1|Name=KJC3_004969-T1|organism=Aspergillus niger KJC3|type=CDS|length=1284bp|location=Sequence derived from alignment at ch4:1237741..1238830+ (Aspergillus niger KJC3)
ATGGACCCAGAAACAGACCCCTCCAATCCCCCCGTAATCAACTACATTCT
CTCCTTCCTTCTAGTCGGGGTAGCCTGGGGCTTCACAACCCCTTTCATCC
GGCGCGCAGCCGCGGACTTTGCAGCCCGCCAACAGCAAAACCAGCAACAG
GACGACAACAACAACAACATCAGCATCAACAGTAATGACAATGTTCCTCT
GACATCTGTTACTCCCGAATACACCGATGAAGCACGTCCCGAAGAAGGAG
GAGAAGAAAGCGAGGAAGATAATCCTCCCCCAGCCACCCACCAAGAACAA
CAGCAGCAGCAACAGCAACAACCAGCATGGATGCAGCAAAACCAGCAGAA
ACCTCCCTCCTGGCTGCGCAAAAAGATCGCTACTTTATTCTGGACAGTGG
TGAATTTGCTTCGCACGCCTGCGTACTCTATCCCCCTCGTTGTGAATTTA
ACGGGGAGTGTGTGGTTCTTTTTGTTGGTGGGGAAGCATGAGTTATCGTT
GACCGTTCCCCTCGCCAACTCTAGTGCCTTTTTGTTCACGGTGCTCGGGG
AATGGTATGTGGAGAGGAAGGTCATTGAGCGCGAAACGTGGTTGGGGATG
GCGTTGGTGTTGGGCGGGATTGCGCTTTGTGTTATGGCTTAGATGGACCC
AGAAACAGACCCCTCCAATCCCCCCGTAATCAACTACATTCTCTCCTTCC
TTCTAGTCGGGGTAGCCTGGGGCTTCACAACCCCTTTCATCCGGCGCGCA
GCCGCGGACTTTGCAGCCCGCCAACAGCAAAACCAGCAACAGGACGACAA
CAACAACAACATCAGCATCAACAGTAATGACAATGTTCCTCTGACATCTG
TTACTCCCGAATACACCGATGAAGCACGTCCCGAAGAAGGAGGAGAAGAA
AGCGAGGAAGATAATCCTCCCCCAGCCACCCACCAAGAACAACAGCAGCA
GCAACAGCAACAACCAGCATGGATGCAGCAAAACCAGCAGAAACCTCCCT
CCTGGCTGCGCAAAAAGATCGCTACTTTATTCTGGACAGTGGTGAATTTG
CTTCGCACGCCTGCGTACTCTATCCCCCTCGTTGTGAATTTAACGGGGAG
TGTGTGGTTCTTTTTGTTGGTGGGGAAGCATGAGTTATCGTTGACCGTTC
CCCTCGCCAACTCTAGTGCCTTTTTGTTCACGGTGCTCGGGGAATGGTAT
GTGGAGAGGAAGGTCATTGAGCGCGAAACGTGGTTGGGGATGGCGTTGGT
GTTGGGCGGGATTGCGCTTTGTGTTATGGCTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004969KJC3_004969Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004969-T1.utr5p1KJC3_004969-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004969-T1.exon1KJC3_004969-T1.exon1Aspergillus niger KJC3exon
KJC3_004969-T1.exon2KJC3_004969-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004969-T1.cdsKJC3_004969-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004969-T1.utr3p1KJC3_004969-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004969-T1KJC3_004969-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018908
DBxrefPFAM:PF10639
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1237741..1238830 +
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