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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1246189..1248793+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004974-T1 ID=KJC3_004974-T1|Name=KJC3_004974-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2605bp|location=Sequence derived from alignment at ch4:1246189..1248793+ (Aspergillus niger KJC3)
GCTCTTTCACTTCACTAACCACCTTCGCCTTCACACACCGCCCCCGACAG
GATTCACTGGTTTCCTGCCTCTTCCACCTTCTATTTCGAAACGCGACTCT
ATTAATACTAGTCTCTGAGGGTGTTCTCCACTATTATTATAGAGCGACCT
CGTCCGAGTCAACGCTCTCTGGCCACCTAAGTCCCTTTTCACTCGGCGCG
ACTGCGGTTCAGGTGGCATCTGTTACCCTGGAAGCCATCCATTCTCCTGC
TGGCGGCTTCCTTCCTTGAGCAGTCTAGCGCCGCTTTCCTTGTTACTGGT
GTTACTAGGACCTGAATTTCAAGGCAACCTCTACCATCATTCACTATGGC
TGACGACCTCGACGCCGAGCTCCTCGCTCTTGCGGGAGACTCCTCCGACG
AGGAAGCATCCCCCCCTGCCAAGGAGAGAGTCCAATCTCGCAGTCGATCA
TCATCCCCTCAGTCTCCCGACGCATCAGCTATGGGTCGCAAAGGCACTGC
TAGGACCGTTAAACGGGGCCGGAAGTCGAGAAGGAACGATGATGAAGAGG
ATGGCGAACTGTATGTTTGACTTGCCACGCGTGCTTGCGATGCCGCTTGA
TGTGGCCGTCACTGCGACTCGAGGACTCGGCTAATATGGCATTCTCTATA
GGTCCGCTGCTGAATCGCTCGACTCCGCTAGCATGTCCGAATCGGATTCA
GGATCGGATTCCGAAGGCTCAGCCCCTGAGGCTGAAGATGAAGGCCCTAT
CTTCCCTTACGAGAAACTATACTACTCTGCTAAGGACAAGGAGGAAATCA
TGGCGATGCCCGAGATCCAACGAGAGCAGCTGCTTTCCGAGCGTGCGCAG
CAGGTTGATCGTCATAATCAAGATCTTGCTCTTCGTCGTCTCCTGGCTTC
CCGTGAACGCGAAGAGGCCCGCAAAGCGAAGAAGAACAAACGCAAGGCCA
GTGTGGCAAATCTTGATGAGGGTAATCGCAAGAGTTCGCGTCAGAAGATG
ACGCTCGGTGGCCGTAAGGTGGGAGAGACCTCCGATGCTATTGAAGCCTA
CAAGCGGCAGCGAGAGCAGAAGGGGAAGCGTGACGAGCTTCGTCGTCGTG
AACCAGTCAAGGATCATAAAGCCCGTTCTCGTGATGACCGGATCTCCGAC
GAAGATGCAGAGGGCGAAAGTGAAGTGGAGTGGGATGACAGAGAACGCTC
ACCGTCGCCCCCGAAAGACGACCCGCCTGCTGAACTCCGGGATATCCAAC
GTACTCGGGTGGGTCGAAGTAACTTTGCCCAGGTCTGCTTTTACCCTGGG
TTTGATGACGCGATCTCCGGCTGCTATGCTCGTGTTAATATTGGGCCGAA
CCGTGAGACCGGTCAGAATGAGTATCGTCTTTGCTTGATCAAGAGTAAGG
CACCCCTCCTACGGTCGCGTTAGAGCATTCGTCGCTGACTTGTCCAGAAT
TTTCCGAGGGAAAGCCCTATGCGATGGAGGGCCAAAATGGCCGGTCTTTT
GTGACGAATCAGTACGCCGTATTAGCACATGGAAAGGCTGAGCGCGAGTT
TCCTTTTGTTGCATGCTCCGACTCTCCGTTTACAGAGGTAAGCCACTTGG
CATGTCTCTTGGTTAACATATACTGATGCTCTGTAGGCGGAGTTCAATCG
CTATCGTCAAACCATGGCCGTCGAAGACTGCAAGATGGCTACGAAGTCAA
TGGTTGCCAGTAAGGTGACAGATATCAACCGGTTGCTGAACCACAAGTTC
ACCAACGAGGAATTGAACGAGAAACTCCGCAAACAAGGCTCGTTGGATTC
GAAGTCCAAGTTCTTCAAGCGCGTGGAGGTCGAGAAGCAGCTGAAGCTTG
CTCGAGAAGCTGGTGATGATGCGGAAATGGAGCGACTGGAGGCTGAGCTG
GCTAGCATGGCGACACCGAAGCTCGCAGTTAGCAGCCATTCCAAGCCGCG
TGTGGACAAGCCCTCGGAACATGAACGTCTTGCTGAGCTGAACATACGCA
ACCAGAAGCTCAACTACGAGAACGTGCGCCGGGCGCAGATAGAAGAGCGC
AAGGCCAGCCGTAAAGCGGCTGCAGCTGTCGCTCGTGGCGAAGCCGCCCA
CAACCCGTTCATGCGCGTTAGAACCCAAGCGCGGACCCATTACGACGTCA
ATGGTAACGGTACCCCGACGGCTGAGAATAACGCGAGCCAAGAAAATACT
GCTTCAGAGACACCGTCCAAAGCGAGCACTCCGGCCAGCGGCACCCCGGC
GGGATCCCAGAAGAAAACCAGCAAAGGTGGCGTTGCCTCCATCCGGCATC
GGAACATGGATGACGAAAACATTGCGGCCTTGGATTTGGAGCTCGACATT
GAAATATGATCTTGGGTAAGGAAAAACTTTGGGCACATCTAGCACACCAC
TAGCATCCTACATACAGCATATGCGATCTTGCCGACGGCTTCTGATGGAA
ATGGCACGATTTTGTTATTCGGGAAGCATTTGAGACAGCGTCGGATTCCA
GGGGGCGGTGTTTATTGGCGTAACGAGAAACATATCATGGGCGCTGTACG
ATACAGAAATAAAGCACCTTTATGAATTGGCTTCACCAGTTGTACAAATC
TACGC back to topCoding sequence (CDS) from alignment at ch4:1246189..1248793+ >KJC3_004974-T1 ID=KJC3_004974-T1|Name=KJC3_004974-T1|organism=Aspergillus niger KJC3|type=CDS|length=7284bp|location=Sequence derived from alignment at ch4:1246189..1248793+ (Aspergillus niger KJC3)
ATGGCTGACGACCTCGACGCCGAGCTCCTCGCTCTTGCGGGAGACTCCTC
CGACGAGGAAGCATCCCCCCCTGCCAAGGAGAGAGTCCAATCTCGCAGTC
GATCATCATCCCCTCAGTCTCCCGACGCATCAGCTATGGGTCGCAAAGGC
ACTGCTAGGACCGTTAAACGGGGCCGGAAGTCGAGAAGGAACGATGATGA
AGAGGATGGCGAACTGTCCGCTGCTGAATCGCTCGACTCCGCTAGCATGT
CCGAATCGGATTCAGGATCGGATTCCGAAGGCTCAGCCCCTGAGGCTGAA
GATGAAGGCCCTATCTTCCCTTACGAGAAACTATACTACTCTGCTAAGGA
CAAGGAGGAAATCATGGCGATGCCCGAGATCCAACGAGAGCAGCTGCTTT
CCGAGCGTGCGCAGCAGGTTGATCGTCATAATCAAGATCTTGCTCTTCGT
CGTCTCCTGGCTTCCCGTGAACGCGAAGAGGCCCGCAAAGCGAAGAAGAA
CAAACGCAAGGCCAGTGTGGCAAATCTTGATGAGGGTAATCGCAAGAGTT
CGCGTCAGAAGATGACGCTCGGTGGCCGTAAGGTGGGAGAGACCTCCGAT
GCTATTGAAGCCTACAAGCGGCAGCGAGAGCAGAAGGGGAAGCGTGACGA
GCTTCGTCGTCGTGAACCAGTCAAGGATCATAAAGCCCGTTCTCGTGATG
ACCGGATCTCCGACGAAGATGCAGAGGGCGAAAGTGAAGTGGAGTGGGAT
GACAGAGAACGCTCACCGTCGCCCCCGAAAGACGACCCGCCTGCTGAACT
CCGGGATATCCAACGTACTCGGGTGGGTCGAAGTAACTTTGCCCAGGTCT
GCTTTTACCCTGGGTTTGATGACGCGATCTCCGGCTGCTATGCTCGTGTT
AATATTGGGCCGAACCGTGAGACCGGTCAGAATGAGTATCGTCTTTGCTT
GATCAAGAAATTTTCCGAGGGAAAGCCCTATGCGATGGAGGGCCAAAATG
GCCGGTCTTTTGTGACGAATCAGTACGCCGTATTAGCACATGGAAAGGCT
GAGCGCGAGTTTCCTTTTGTTGCATGCTCCGACTCTCCGTTTACAGAGGC
GGAGTTCAATCGCTATCGTCAAACCATGGCCGTCGAAGACTGCAAGATGG
CTACGAAGTCAATGGTTGCCAGTAAGGTGACAGATATCAACCGGTTGCTG
AACCACAAGTTCACCAACGAGGAATTGAACGAGAAACTCCGCAAACAAGG
CTCGTTGGATTCGAAGTCCAAGTTCTTCAAGCGCGTGGAGGTCGAGAAGC
AGCTGAAGCTTGCTCGAGAAGCTGGTGATGATGCGGAAATGGAGCGACTG
GAGGCTGAGCTGGCTAGCATGGCGACACCGAAGCTCGCAGTTAGCAGCCA
TTCCAAGCCGCGTGTGGACAAGCCCTCGGAACATGAACGTCTTGCTGAGC
TGAACATACGCAACCAGAAGCTCAACTACGAGAACGTGCGCCGGGCGCAG
ATAGAAGAGCGCAAGGCCAGCCGTAAAGCGGCTGCAGCTGTCGCTCGTGG
CGAAGCCGCCCACAACCCGTTCATGCGCGTTAGAACCCAAGCGCGGACCC
ATTACGACGTCAATGGTAACGGTACCCCGACGGCTGAGAATAACGCGAGC
CAAGAAAATACTGCTTCAGAGACACCGTCCAAAGCGAGCACTCCGGCCAG
CGGCACCCCGGCGGGATCCCAGAAGAAAACCAGCAAAGGTGGCGTTGCCT
CCATCCGGCATCGGAACATGGATGACGAAAACATTGCGGCCTTGGATTTG
GAGCTCGACATTGAAATATGAATGGCTGACGACCTCGACGCCGAGCTCCT
CGCTCTTGCGGGAGACTCCTCCGACGAGGAAGCATCCCCCCCTGCCAAGG
AGAGAGTCCAATCTCGCAGTCGATCATCATCCCCTCAGTCTCCCGACGCA
TCAGCTATGGGTCGCAAAGGCACTGCTAGGACCGTTAAACGGGGCCGGAA
GTCGAGAAGGAACGATGATGAAGAGGATGGCGAACTGTCCGCTGCTGAAT
CGCTCGACTCCGCTAGCATGTCCGAATCGGATTCAGGATCGGATTCCGAA
GGCTCAGCCCCTGAGGCTGAAGATGAAGGCCCTATCTTCCCTTACGAGAA
ACTATACTACTCTGCTAAGGACAAGGAGGAAATCATGGCGATGCCCGAGA
TCCAACGAGAGCAGCTGCTTTCCGAGCGTGCGCAGCAGGTTGATCGTCAT
AATCAAGATCTTGCTCTTCGTCGTCTCCTGGCTTCCCGTGAACGCGAAGA
GGCCCGCAAAGCGAAGAAGAACAAACGCAAGGCCAGTGTGGCAAATCTTG
ATGAGGGTAATCGCAAGAGTTCGCGTCAGAAGATGACGCTCGGTGGCCGT
AAGGTGGGAGAGACCTCCGATGCTATTGAAGCCTACAAGCGGCAGCGAGA
GCAGAAGGGGAAGCGTGACGAGCTTCGTCGTCGTGAACCAGTCAAGGATC
ATAAAGCCCGTTCTCGTGATGACCGGATCTCCGACGAAGATGCAGAGGGC
GAAAGTGAAGTGGAGTGGGATGACAGAGAACGCTCACCGTCGCCCCCGAA
AGACGACCCGCCTGCTGAACTCCGGGATATCCAACGTACTCGGGTGGGTC
GAAGTAACTTTGCCCAGGTCTGCTTTTACCCTGGGTTTGATGACGCGATC
TCCGGCTGCTATGCTCGTGTTAATATTGGGCCGAACCGTGAGACCGGTCA
GAATGAGTATCGTCTTTGCTTGATCAAGAAATTTTCCGAGGGAAAGCCCT
ATGCGATGGAGGGCCAAAATGGCCGGTCTTTTGTGACGAATCAGTACGCC
GTATTAGCACATGGAAAGGCTGAGCGCGAGTTTCCTTTTGTTGCATGCTC
CGACTCTCCGTTTACAGAGGCGGAGTTCAATCGCTATCGTCAAACCATGG
CCGTCGAAGACTGCAAGATGGCTACGAAGTCAATGGTTGCCAGTAAGGTG
ACAGATATCAACCGGTTGCTGAACCACAAGTTCACCAACGAGGAATTGAA
CGAGAAACTCCGCAAACAAGGCTCGTTGGATTCGAAGTCCAAGTTCTTCA
AGCGCGTGGAGGTCGAGAAGCAGCTGAAGCTTGCTCGAGAAGCTGGTGAT
GATGCGGAAATGGAGCGACTGGAGGCTGAGCTGGCTAGCATGGCGACACC
GAAGCTCGCAGTTAGCAGCCATTCCAAGCCGCGTGTGGACAAGCCCTCGG
AACATGAACGTCTTGCTGAGCTGAACATACGCAACCAGAAGCTCAACTAC
GAGAACGTGCGCCGGGCGCAGATAGAAGAGCGCAAGGCCAGCCGTAAAGC
GGCTGCAGCTGTCGCTCGTGGCGAAGCCGCCCACAACCCGTTCATGCGCG
TTAGAACCCAAGCGCGGACCCATTACGACGTCAATGGTAACGGTACCCCG
ACGGCTGAGAATAACGCGAGCCAAGAAAATACTGCTTCAGAGACACCGTC
CAAAGCGAGCACTCCGGCCAGCGGCACCCCGGCGGGATCCCAGAAGAAAA
CCAGCAAAGGTGGCGTTGCCTCCATCCGGCATCGGAACATGGATGACGAA
AACATTGCGGCCTTGGATTTGGAGCTCGACATTGAAATATGAATGGCTGA
CGACCTCGACGCCGAGCTCCTCGCTCTTGCGGGAGACTCCTCCGACGAGG
AAGCATCCCCCCCTGCCAAGGAGAGAGTCCAATCTCGCAGTCGATCATCA
TCCCCTCAGTCTCCCGACGCATCAGCTATGGGTCGCAAAGGCACTGCTAG
GACCGTTAAACGGGGCCGGAAGTCGAGAAGGAACGATGATGAAGAGGATG
GCGAACTGTCCGCTGCTGAATCGCTCGACTCCGCTAGCATGTCCGAATCG
GATTCAGGATCGGATTCCGAAGGCTCAGCCCCTGAGGCTGAAGATGAAGG
CCCTATCTTCCCTTACGAGAAACTATACTACTCTGCTAAGGACAAGGAGG
AAATCATGGCGATGCCCGAGATCCAACGAGAGCAGCTGCTTTCCGAGCGT
GCGCAGCAGGTTGATCGTCATAATCAAGATCTTGCTCTTCGTCGTCTCCT
GGCTTCCCGTGAACGCGAAGAGGCCCGCAAAGCGAAGAAGAACAAACGCA
AGGCCAGTGTGGCAAATCTTGATGAGGGTAATCGCAAGAGTTCGCGTCAG
AAGATGACGCTCGGTGGCCGTAAGGTGGGAGAGACCTCCGATGCTATTGA
AGCCTACAAGCGGCAGCGAGAGCAGAAGGGGAAGCGTGACGAGCTTCGTC
GTCGTGAACCAGTCAAGGATCATAAAGCCCGTTCTCGTGATGACCGGATC
TCCGACGAAGATGCAGAGGGCGAAAGTGAAGTGGAGTGGGATGACAGAGA
ACGCTCACCGTCGCCCCCGAAAGACGACCCGCCTGCTGAACTCCGGGATA
TCCAACGTACTCGGGTGGGTCGAAGTAACTTTGCCCAGGTCTGCTTTTAC
CCTGGGTTTGATGACGCGATCTCCGGCTGCTATGCTCGTGTTAATATTGG
GCCGAACCGTGAGACCGGTCAGAATGAGTATCGTCTTTGCTTGATCAAGA
AATTTTCCGAGGGAAAGCCCTATGCGATGGAGGGCCAAAATGGCCGGTCT
TTTGTGACGAATCAGTACGCCGTATTAGCACATGGAAAGGCTGAGCGCGA
GTTTCCTTTTGTTGCATGCTCCGACTCTCCGTTTACAGAGGCGGAGTTCA
ATCGCTATCGTCAAACCATGGCCGTCGAAGACTGCAAGATGGCTACGAAG
TCAATGGTTGCCAGTAAGGTGACAGATATCAACCGGTTGCTGAACCACAA
GTTCACCAACGAGGAATTGAACGAGAAACTCCGCAAACAAGGCTCGTTGG
ATTCGAAGTCCAAGTTCTTCAAGCGCGTGGAGGTCGAGAAGCAGCTGAAG
CTTGCTCGAGAAGCTGGTGATGATGCGGAAATGGAGCGACTGGAGGCTGA
GCTGGCTAGCATGGCGACACCGAAGCTCGCAGTTAGCAGCCATTCCAAGC
CGCGTGTGGACAAGCCCTCGGAACATGAACGTCTTGCTGAGCTGAACATA
CGCAACCAGAAGCTCAACTACGAGAACGTGCGCCGGGCGCAGATAGAAGA
GCGCAAGGCCAGCCGTAAAGCGGCTGCAGCTGTCGCTCGTGGCGAAGCCG
CCCACAACCCGTTCATGCGCGTTAGAACCCAAGCGCGGACCCATTACGAC
GTCAATGGTAACGGTACCCCGACGGCTGAGAATAACGCGAGCCAAGAAAA
TACTGCTTCAGAGACACCGTCCAAAGCGAGCACTCCGGCCAGCGGCACCC
CGGCGGGATCCCAGAAGAAAACCAGCAAAGGTGGCGTTGCCTCCATCCGG
CATCGGAACATGGATGACGAAAACATTGCGGCCTTGGATTTGGAGCTCGA
CATTGAAATATGAATGGCTGACGACCTCGACGCCGAGCTCCTCGCTCTTG
CGGGAGACTCCTCCGACGAGGAAGCATCCCCCCCTGCCAAGGAGAGAGTC
CAATCTCGCAGTCGATCATCATCCCCTCAGTCTCCCGACGCATCAGCTAT
GGGTCGCAAAGGCACTGCTAGGACCGTTAAACGGGGCCGGAAGTCGAGAA
GGAACGATGATGAAGAGGATGGCGAACTGTCCGCTGCTGAATCGCTCGAC
TCCGCTAGCATGTCCGAATCGGATTCAGGATCGGATTCCGAAGGCTCAGC
CCCTGAGGCTGAAGATGAAGGCCCTATCTTCCCTTACGAGAAACTATACT
ACTCTGCTAAGGACAAGGAGGAAATCATGGCGATGCCCGAGATCCAACGA
GAGCAGCTGCTTTCCGAGCGTGCGCAGCAGGTTGATCGTCATAATCAAGA
TCTTGCTCTTCGTCGTCTCCTGGCTTCCCGTGAACGCGAAGAGGCCCGCA
AAGCGAAGAAGAACAAACGCAAGGCCAGTGTGGCAAATCTTGATGAGGGT
AATCGCAAGAGTTCGCGTCAGAAGATGACGCTCGGTGGCCGTAAGGTGGG
AGAGACCTCCGATGCTATTGAAGCCTACAAGCGGCAGCGAGAGCAGAAGG
GGAAGCGTGACGAGCTTCGTCGTCGTGAACCAGTCAAGGATCATAAAGCC
CGTTCTCGTGATGACCGGATCTCCGACGAAGATGCAGAGGGCGAAAGTGA
AGTGGAGTGGGATGACAGAGAACGCTCACCGTCGCCCCCGAAAGACGACC
CGCCTGCTGAACTCCGGGATATCCAACGTACTCGGGTGGGTCGAAGTAAC
TTTGCCCAGGTCTGCTTTTACCCTGGGTTTGATGACGCGATCTCCGGCTG
CTATGCTCGTGTTAATATTGGGCCGAACCGTGAGACCGGTCAGAATGAGT
ATCGTCTTTGCTTGATCAAGAAATTTTCCGAGGGAAAGCCCTATGCGATG
GAGGGCCAAAATGGCCGGTCTTTTGTGACGAATCAGTACGCCGTATTAGC
ACATGGAAAGGCTGAGCGCGAGTTTCCTTTTGTTGCATGCTCCGACTCTC
CGTTTACAGAGGCGGAGTTCAATCGCTATCGTCAAACCATGGCCGTCGAA
GACTGCAAGATGGCTACGAAGTCAATGGTTGCCAGTAAGGTGACAGATAT
CAACCGGTTGCTGAACCACAAGTTCACCAACGAGGAATTGAACGAGAAAC
TCCGCAAACAAGGCTCGTTGGATTCGAAGTCCAAGTTCTTCAAGCGCGTG
GAGGTCGAGAAGCAGCTGAAGCTTGCTCGAGAAGCTGGTGATGATGCGGA
AATGGAGCGACTGGAGGCTGAGCTGGCTAGCATGGCGACACCGAAGCTCG
CAGTTAGCAGCCATTCCAAGCCGCGTGTGGACAAGCCCTCGGAACATGAA
CGTCTTGCTGAGCTGAACATACGCAACCAGAAGCTCAACTACGAGAACGT
GCGCCGGGCGCAGATAGAAGAGCGCAAGGCCAGCCGTAAAGCGGCTGCAG
CTGTCGCTCGTGGCGAAGCCGCCCACAACCCGTTCATGCGCGTTAGAACC
CAAGCGCGGACCCATTACGACGTCAATGGTAACGGTACCCCGACGGCTGA
GAATAACGCGAGCCAAGAAAATACTGCTTCAGAGACACCGTCCAAAGCGA
GCACTCCGGCCAGCGGCACCCCGGCGGGATCCCAGAAGAAAACCAGCAAA
GGTGGCGTTGCCTCCATCCGGCATCGGAACATGGATGACGAAAACATTGC
GGCCTTGGATTTGGAGCTCGACATTGAAATATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004974-T1.utr5p1 | KJC3_004974-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004974-T1.utr3p1 | KJC3_004974-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264XOZ |
| DBxref | InterPro:IPR036128 |
| DBxref | InterPro:IPR004343 |
| DBxref | PFAM:PF03126 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1246189..1248793 + |
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