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KJC3_004988-T1, KJC3_004988-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004988-T1
Unique NameKJC3_004988-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1283548..1286218-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004988-T1 ID=KJC3_004988-T1|Name=KJC3_004988-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2671bp|location=Sequence derived from alignment at ch4:1283548..1286218- (Aspergillus niger KJC3)
ATGCGACGTCCTAGACATAATACGACCTCCTTACCGAGGGACCTGCGCGC
CGAACTCGGGATTAGAGATACCTACGGCGAGAAGAAGAATAGGAACAACG
GACCGGCATCGCGGAAAGAACGCCGTCGGGAAGAACGCTCCGGGAAGAAG
CAGCCTCAGTTTCAGCGACAGCAGAGAGGACTGCCTCCGAAGAAGAGGGG
TCGGTATGATGATGACGAGGATGACGATGAGGATATGGGGGATTTTGACG
ATTTTGATTTAGATGAGGGTGATGATGATGAGGATGCGGGTGATGTTATG
GCGAAACTTGCTAAGGCGAAAGCGGCGAAGGGGAAGGGTGCTGCTCCTGC
TCCTGCTAAGGAGGAGAAGAAGCAGCCCAAGTCTATTCTGAAAAAGGCGA
AGGCTGTGGAGAGTTCTGAGGAGGAGGATGATGATATTGACCTTGATGAG
GATGAGGACAACAAAGTCACAATGCGACGCCCGATATCGAAGACAGTTCA
ATCGAAGCTCGAGGAGGACGATGCGGAAATCGCTGCGCTGGAGAAGAAGC
TCGGTCTGAAAAAGGGCAAGAAGCTCCCGAAGTCGTTCGAAGAGGATGGT
CTGGGTGATTTGCTGGGTGATTTGGATGAGGATTCTGCAGATGAGGGCCG
GAAGCGCAAGAGGGAAGCTGATGAGTGGCTACGGAGTAAGCGGAGAAAGG
CGCAGGGCCTGGAGGAGCCTGAGGAGGAGGATTCTGAGGAGGAAGATGAT
AGTGATATGGGAGATGGGCTTGAAGGCTTTGACGACGACGAGTCCATGGG
CGATTTCGATGAAGATGAAGAAGGTGATGAGGATGAGGATGAGGAAGAGG
AGCCGGCTCCTAAGAAGAAGGAAAACCCCTACGTCGCTCCAGTCAAAGAA
GCCGAAAGCCGTCCCCAGAAGTACATCCCTCCTTCGCTTCGCGCTGCTTC
CAATTCAGAAGATGAGTCTCTTGTTCGCCTGAGGAGACAGGCTCAGGGTC
ACTTGAACAAGCTGTCTGAAGCTAACATGGTCTCTATTCTCGCGGAGTTC
GAGAAGCTCTACCGGGATCATCCTCGTCAAAATGTCACTTCGACCTTGAT
CTCTCTGCTATTCGGATTGATCTGCGAGAGATCTGCTCTGTCGGATACTT
TCATCATTCTACATGCGGGTTTCATTGCTGCAGTGTATAAAATTGTGGGT
ACGGACTTTGGCGCGGAAATCGTGCAGAAGATCGTCGAGACCTTCGATGC
CCGCGGCGATGAACGGGGTAAGTTCGAAGGAAAGGAGACCATCAACCTGA
TCTCTCTTTTGTCTCAACTGTACAACTTCCACGTTATCGGAAGCACTCTT
GTCTTCGACTACATCCGGCTCTTCCTCGAAGAAATCACCGAGGAGAACAC
CGAACTGCTCCTCAAGATCATCCGAAGTACGTTATTCCCATCCCTTCCTT
CTTAAGCCCGTACTAACCACCCCAGACTCCGGACCCCAACTCCGACAAGA
TGATCCCTCCTCCCTCAAAGACATCGTCCTTCTCATCCAACCCGCCGTCG
CGAAAGCCGGCGAAGCCGCCCTCTCCGTCCGTACCAAGTTCATGATCGAC
ACCATCACCGACCTCAAGAACAACAAGCTGAAATCCAACGTGAACGCCAG
CATCAGCTCCGAACACATCACCAAGATGCGCAAGATTCTCGGCTCTCTCA
ACAACACACGAGTCATCCGGGCCTCCGAACCCATCAGCATCTCCCGCACC
GATATCCACAACTCCGAGAAGAAGGGCAAATGGTGGCTCGTCGGCGCCAG
CTGGCGCGAAGATCCCCTCGAGTCCGCCCGGAAGGAACTCAACGGCCTCC
CCACGAACAGCACCCACGCCGACGTCTCAGACAGCGACTCCGAGCCCGAC
CTCGTCAACATCGCCAAAGCGCACCGCATGAACACTGACGTCCGCCGCTC
CATCTTCGTCGCTATCATGTCCGCAACCGACTACCAGGACGCACACGTCC
GCCTCCTCAAACTCCGTCTCAAACGCGCCCAGGAATTCGAAATCCCCCGT
GTCCTCACCCACTGCGCCATGGAAGAAGAAGCCCACAACCCCTACTACAC
GCTCATCGCGAAGCGCCTCTGTGGCGAAATGGGCCGTCGCATCAAGGTAT
CCTTCATGTACACGCTATGGAACATCTTCAAACGCATGGGCGAGTCCGGC
GACATGGACGATAGCGATGACGACGACGCATTCGACGACGAAGACGATCA
AAACAAACTCGAGATGAAATCCGTCGTCAACCTAGCGAAGATGTACGGAT
CGCTTATCGCAGATGGGACGTTGAATCTGGGCGTGCTTAAGATCCTTAAC
TTCGCATATTTGCAGCCGAAGAGCAAGGCCTTTGTGGAGTTGCTCTTGAT
TAGTGTGATCCAGCAGTCGCAGAAGCAGAAGAAAAAGAAGAAGTCGAAGT
CGAAGGATGAGGATGAGCAGGATGAGAAGGCGCTTCTGGAGATCTTCCTG
CGCGCGAGAGAAACGCCCCAGATTGTCAAGGGCTTGATCTTCTTCTTGAG
GAAGGTGGTCGCGAAGACGGATATTGTGCCTTCTGGGAAGGAGTTGAAGG
TTGTTAAGTGGGGATGTAAGGTTGCGGTGGATGCGTTGAAGGTTGTGGTT
AAGGAAGGGGATGCTGAGTGA
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Coding sequence (CDS) from alignment at ch4:1283548..1286218-

>KJC3_004988-T1 ID=KJC3_004988-T1|Name=KJC3_004988-T1|organism=Aspergillus niger KJC3|type=CDS|length=5244bp|location=Sequence derived from alignment at ch4:1283548..1286218- (Aspergillus niger KJC3)
ACTCCGGACCCCAACTCCGACAAGATGATCCCTCCTCCCTCAAAGACATC
GTCCTTCTCATCCAACCCGCCGTCGCGAAAGCCGGCGAAGCCGCCCTCTC
CGTCCGTACCAAGTTCATGATCGACACCATCACCGACCTCAAGAACAACA
AGCTGAAATCCAACGTGAACGCCAGCATCAGCTCCGAACACATCACCAAG
ATGCGCAAGATTCTCGGCTCTCTCAACAACACACGAGTCATCCGGGCCTC
CGAACCCATCAGCATCTCCCGCACCGATATCCACAACTCCGAGAAGAAGG
GCAAATGGTGGCTCGTCGGCGCCAGCTGGCGCGAAGATCCCCTCGAGTCC
GCCCGGAAGGAACTCAACGGCCTCCCCACGAACAGCACCCACGCCGACGT
CTCAGACAGCGACTCCGAGCCCGACCTCGTCAACATCGCCAAAGCGCACC
GCATGAACACTGACGTCCGCCGCTCCATCTTCGTCGCTATCATGTCCGCA
ACCGACTACCAGGACGCACACGTCCGCCTCCTCAAACTCCGTCTCAAACG
CGCCCAGGAATTCGAAATCCCCCGTGTCCTCACCCACTGCGCCATGGAAG
AAGAAGCCCACAACCCCTACTACACGCTCATCGCGAAGCGCCTCTGTGGC
GAAATGGGCCGTCGCATCAAGGTATCCTTCATGTACACGCTATGGAACAT
CTTCAAACGCATGGGCGAGTCCGGCGACATGGACGATAGCGATGACGACG
ACGCATTCGACGACGAAGACGATCAAAACAAACTCGAGATGAAATCCGTC
GTCAACCTAGCGAAGATGTACGGATCGCTTATCGCAGATGGGACGTTGAA
TCTGGGCGTGCTTAAGATCCTTAACTTCGCATATTTGCAGCCGAAGAGCA
AGGCCTTTGTGGAGTTGCTCTTGATTAGTGTGATCCAGCAGTCGCAGAAG
CAGAAGAAAAAGAAGAAGTCGAAGTCGAAGGATGAGGATGAGCAGGATGA
GAAGGCGCTTCTGGAGATCTTCCTGCGCGCGAGAGAAACGCCCCAGATTG
TCAAGGGCTTGATCTTCTTCTTGAGGAAGGTGGTCGCGAAGACGGATATT
GTGCCTTCTGGGAAGGAGTTGAAGGTTGTTAAGTGGGGATGTAAGGTTGC
GGTGGATGCGTTGAAGGTTGTGGTTAAGGAAGGGGATGCTGAGTGAATGC
GACGTCCTAGACATAATACGACCTCCTTACCGAGGGACCTGCGCGCCGAA
CTCGGGATTAGAGATACCTACGGCGAGAAGAAGAATAGGAACAACGGACC
GGCATCGCGGAAAGAACGCCGTCGGGAAGAACGCTCCGGGAAGAAGCAGC
CTCAGTTTCAGCGACAGCAGAGAGGACTGCCTCCGAAGAAGAGGGGTCGG
TATGATGATGACGAGGATGACGATGAGGATATGGGGGATTTTGACGATTT
TGATTTAGATGAGGGTGATGATGATGAGGATGCGGGTGATGTTATGGCGA
AACTTGCTAAGGCGAAAGCGGCGAAGGGGAAGGGTGCTGCTCCTGCTCCT
GCTAAGGAGGAGAAGAAGCAGCCCAAGTCTATTCTGAAAAAGGCGAAGGC
TGTGGAGAGTTCTGAGGAGGAGGATGATGATATTGACCTTGATGAGGATG
AGGACAACAAAGTCACAATGCGACGCCCGATATCGAAGACAGTTCAATCG
AAGCTCGAGGAGGACGATGCGGAAATCGCTGCGCTGGAGAAGAAGCTCGG
TCTGAAAAAGGGCAAGAAGCTCCCGAAGTCGTTCGAAGAGGATGGTCTGG
GTGATTTGCTGGGTGATTTGGATGAGGATTCTGCAGATGAGGGCCGGAAG
CGCAAGAGGGAAGCTGATGAGTGGCTACGGAGTAAGCGGAGAAAGGCGCA
GGGCCTGGAGGAGCCTGAGGAGGAGGATTCTGAGGAGGAAGATGATAGTG
ATATGGGAGATGGGCTTGAAGGCTTTGACGACGACGAGTCCATGGGCGAT
TTCGATGAAGATGAAGAAGGTGATGAGGATGAGGATGAGGAAGAGGAGCC
GGCTCCTAAGAAGAAGGAAAACCCCTACGTCGCTCCAGTCAAAGAAGCCG
AAAGCCGTCCCCAGAAGTACATCCCTCCTTCGCTTCGCGCTGCTTCCAAT
TCAGAAGATGAGTCTCTTGTTCGCCTGAGGAGACAGGCTCAGGGTCACTT
GAACAAGCTGTCTGAAGCTAACATGGTCTCTATTCTCGCGGAGTTCGAGA
AGCTCTACCGGGATCATCCTCGTCAAAATGTCACTTCGACCTTGATCTCT
CTGCTATTCGGATTGATCTGCGAGAGATCTGCTCTGTCGGATACTTTCAT
CATTCTACATGCGGGTTTCATTGCTGCAGTGTATAAAATTGTGGGTACGG
ACTTTGGCGCGGAAATCGTGCAGAAGATCGTCGAGACCTTCGATGCCCGC
GGCGATGAACGGGGTAAGTTCGAAGGAAAGGAGACCATCAACCTGATCTC
TCTTTTGTCTCAACTGTACAACTTCCACGTTATCGGAAGCACTCTTGTCT
TCGACTACATCCGGCTCTTCCTCGAAGAAATCACCGAGGAGAACACCGAA
CTGCTCCTCAAGATCATCCGAAACTCCGGACCCCAACTCCGACAAGATGA
TCCCTCCTCCCTCAAAGACATCGTCCTTCTCATCCAACCCGCCGTCGCGA
AAGCCGGCGAAGCCGCCCTCTCCGTCCGTACCAAGTTCATGATCGACACC
ATCACCGACCTCAAGAACAACAAGCTGAAATCCAACGTGAACGCCAGCAT
CAGCTCCGAACACATCACCAAGATGCGCAAGATTCTCGGCTCTCTCAACA
ACACACGAGTCATCCGGGCCTCCGAACCCATCAGCATCTCCCGCACCGAT
ATCCACAACTCCGAGAAGAAGGGCAAATGGTGGCTCGTCGGCGCCAGCTG
GCGCGAAGATCCCCTCGAGTCCGCCCGGAAGGAACTCAACGGCCTCCCCA
CGAACAGCACCCACGCCGACGTCTCAGACAGCGACTCCGAGCCCGACCTC
GTCAACATCGCCAAAGCGCACCGCATGAACACTGACGTCCGCCGCTCCAT
CTTCGTCGCTATCATGTCCGCAACCGACTACCAGGACGCACACGTCCGCC
TCCTCAAACTCCGTCTCAAACGCGCCCAGGAATTCGAAATCCCCCGTGTC
CTCACCCACTGCGCCATGGAAGAAGAAGCCCACAACCCCTACTACACGCT
CATCGCGAAGCGCCTCTGTGGCGAAATGGGCCGTCGCATCAAGGTATCCT
TCATGTACACGCTATGGAACATCTTCAAACGCATGGGCGAGTCCGGCGAC
ATGGACGATAGCGATGACGACGACGCATTCGACGACGAAGACGATCAAAA
CAAACTCGAGATGAAATCCGTCGTCAACCTAGCGAAGATGTACGGATCGC
TTATCGCAGATGGGACGTTGAATCTGGGCGTGCTTAAGATCCTTAACTTC
GCATATTTGCAGCCGAAGAGCAAGGCCTTTGTGGAGTTGCTCTTGATTAG
TGTGATCCAGCAGTCGCAGAAGCAGAAGAAAAAGAAGAAGTCGAAGTCGA
AGGATGAGGATGAGCAGGATGAGAAGGCGCTTCTGGAGATCTTCCTGCGC
GCGAGAGAAACGCCCCAGATTGTCAAGGGCTTGATCTTCTTCTTGAGGAA
GGTGGTCGCGAAGACGGATATTGTGCCTTCTGGGAAGGAGTTGAAGGTTG
TTAAGTGGGGATGTAAGGTTGCGGTGGATGCGTTGAAGGTTGTGGTTAAG
GAAGGGGATGCTGAGTGAATGCGACGTCCTAGACATAATACGACCTCCTT
ACCGAGGGACCTGCGCGCCGAACTCGGGATTAGAGATACCTACGGCGAGA
AGAAGAATAGGAACAACGGACCGGCATCGCGGAAAGAACGCCGTCGGGAA
GAACGCTCCGGGAAGAAGCAGCCTCAGTTTCAGCGACAGCAGAGAGGACT
GCCTCCGAAGAAGAGGGGTCGGTATGATGATGACGAGGATGACGATGAGG
ATATGGGGGATTTTGACGATTTTGATTTAGATGAGGGTGATGATGATGAG
GATGCGGGTGATGTTATGGCGAAACTTGCTAAGGCGAAAGCGGCGAAGGG
GAAGGGTGCTGCTCCTGCTCCTGCTAAGGAGGAGAAGAAGCAGCCCAAGT
CTATTCTGAAAAAGGCGAAGGCTGTGGAGAGTTCTGAGGAGGAGGATGAT
GATATTGACCTTGATGAGGATGAGGACAACAAAGTCACAATGCGACGCCC
GATATCGAAGACAGTTCAATCGAAGCTCGAGGAGGACGATGCGGAAATCG
CTGCGCTGGAGAAGAAGCTCGGTCTGAAAAAGGGCAAGAAGCTCCCGAAG
TCGTTCGAAGAGGATGGTCTGGGTGATTTGCTGGGTGATTTGGATGAGGA
TTCTGCAGATGAGGGCCGGAAGCGCAAGAGGGAAGCTGATGAGTGGCTAC
GGAGTAAGCGGAGAAAGGCGCAGGGCCTGGAGGAGCCTGAGGAGGAGGAT
TCTGAGGAGGAAGATGATAGTGATATGGGAGATGGGCTTGAAGGCTTTGA
CGACGACGAGTCCATGGGCGATTTCGATGAAGATGAAGAAGGTGATGAGG
ATGAGGATGAGGAAGAGGAGCCGGCTCCTAAGAAGAAGGAAAACCCCTAC
GTCGCTCCAGTCAAAGAAGCCGAAAGCCGTCCCCAGAAGTACATCCCTCC
TTCGCTTCGCGCTGCTTCCAATTCAGAAGATGAGTCTCTTGTTCGCCTGA
GGAGACAGGCTCAGGGTCACTTGAACAAGCTGTCTGAAGCTAACATGGTC
TCTATTCTCGCGGAGTTCGAGAAGCTCTACCGGGATCATCCTCGTCAAAA
TGTCACTTCGACCTTGATCTCTCTGCTATTCGGATTGATCTGCGAGAGAT
CTGCTCTGTCGGATACTTTCATCATTCTACATGCGGGTTTCATTGCTGCA
GTGTATAAAATTGTGGGTACGGACTTTGGCGCGGAAATCGTGCAGAAGAT
CGTCGAGACCTTCGATGCCCGCGGCGATGAACGGGGTAAGTTCGAAGGAA
AGGAGACCATCAACCTGATCTCTCTTTTGTCTCAACTGTACAACTTCCAC
GTTATCGGAAGCACTCTTGTCTTCGACTACATCCGGCTCTTCCTCGAAGA
AATCACCGAGGAGAACACCGAACTGCTCCTCAAGATCATCCGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004988KJC3_004988Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004988-T1KJC3_004988-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004988-T1.cdsKJC3_004988-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004988-T1.exon2KJC3_004988-T1.exon2Aspergillus niger KJC3exon
KJC3_004988-T1.exon1KJC3_004988-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09261I1G
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR016021
DBxrefInterPro:IPR003891
DBxrefInterPro:IPR003890
DBxrefPFAM:PF02854
DBxrefPFAM:PF02847
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1283548..1286218 -
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