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KJC3_005016-T1, KJC3_005016-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005016-T1
Unique NameKJC3_005016-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1364956..1366196-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005016-T1 ID=KJC3_005016-T1|Name=KJC3_005016-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1241bp|location=Sequence derived from alignment at ch4:1364956..1366196- (Aspergillus niger KJC3)
GCAACACCTTCCCTCATGAACACCCTTATAATTGCCAACCACAAAAGACC
CTCACAACAACCATGAACAAAATTACTGGAGCTCTCATCGACGAAGCAAC
CCACATCCGGGCCATCGCCAAAGATGTCGTCCTCTCAGGGACATATTTCT
ACCCAATTAAGGTGCACTTCCACCACCTGAACCAACCACATCCCCCCATC
CCCCATACAGACATCCATAGCTACTATACCTACACCGAATAAACCACCCC
CAACCCAATACTAAATATCAATATAGGGAATAATCTACACCCTCAACCGC
CCCACCCTCCGCCAACCCCTCCTCTCCCGCTCCTCCAAAACCCTCACCCT
CGGCGTGGGCGTCACCACAGCCATGTTCTTCTTCACTTACGTGCCCCAAG
CAGCCATCATGTCCATTACCAGTGGGCCCCTCCTCGCCCCCTTCTCCGCC
GCATTACTCGTCCTCAGCGAGTCTTCCACCATCACGACCTTCCTCGCGAG
GTCGTTTCTCCTCGCGGATGCGATCACCGCTACGTTTGATGCGACGCTCG
TAGAGATGGGTCAGGAGAAACTACTTGAACAGTCTGGAAAGAGTAGTGGT
GATGATGCTATCTCCCGCCTCGGGAGCAAGGAAGAAGTCGAGGAAAGACA
AACGAACATGTGGAATATGTTGGTGAGGAGTGTGGTATTGCTGCCATTGA
ACTTCGTTCCTGTTGTGGGAACGGTGATGTATGTTTATGTGCAGGGGAAG
AAGGTCGGTGAGGGGGTGCATGAGCGGTGGTTTGCGTTGAAGGGGTGGAA
GAAGGGGGATAGGGCGAGATGGGTCGGGAGGTGGAGGGGGAAGTATACTG
GGTATGTTTTATCTTTTCTTTTTTCCCCCTTGGGGTGGTAGTATATTTGG
GGGTGTGGGTGATGGCTGACTGACTGCTGGGTAGGTTTGGGATGGCGGCG
TTCGCGCTGGAAATGGTCCCGTTTGTGTCGATTGCGTTTGCGTTTACGAA
TACGGTCGGGGCGGCGTTGTGGGCGGCGGATTGGGAGAAATCGTTGCAGT
AGGTTTTTCTTGTTGGTGGATGTGATTCTCACGGGGATGGGATGGGATGC
AGCTGTTGAAGGACCGGGAGGGAAAAGTTCAGTGTGTTTTTATGTAGTTC
TTGTATGATATGTGTGGTGTGAGGTGAATATGTGTACATTTGGTATATAT
ATTTTCTGTTTCTTACTGTCGTAACTACATATTGAAGTCAG
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Coding sequence (CDS) from alignment at ch4:1364956..1366196-

>KJC3_005016-T1 ID=KJC3_005016-T1|Name=KJC3_005016-T1|organism=Aspergillus niger KJC3|type=CDS|length=2376bp|location=Sequence derived from alignment at ch4:1364956..1366196- (Aspergillus niger KJC3)
GTTTGGGATGGCGGCGTTCGCGCTGGAAATGGTCCCGTTTGTGTCGATTG
CGTTTGCGTTTACGAATACGGTCGGGGCGGCGTTGTGGGCGGCGGATTGG
GAGAAATCGTTGCAGTAGGGAATAATCTACACCCTCAACCGCCCCACCCT
CCGCCAACCCCTCCTCTCCCGCTCCTCCAAAACCCTCACCCTCGGCGTGG
GCGTCACCACAGCCATGTTCTTCTTCACTTACGTGCCCCAAGCAGCCATC
ATGTCCATTACCAGTGGGCCCCTCCTCGCCCCCTTCTCCGCCGCATTACT
CGTCCTCAGCGAGTCTTCCACCATCACGACCTTCCTCGCGAGGTCGTTTC
TCCTCGCGGATGCGATCACCGCTACGTTTGATGCGACGCTCGTAGAGATG
GGTCAGGAGAAACTACTTGAACAGTCTGGAAAGAGTAGTGGTGATGATGC
TATCTCCCGCCTCGGGAGCAAGGAAGAAGTCGAGGAAAGACAAACGAACA
TGTGGAATATGTTGGTGAGGAGTGTGGTATTGCTGCCATTGAACTTCGTT
CCTGTTGTGGGAACGGTGATGTATGTTTATGTGCAGGGGAAGAAGGTCGG
TGAGGGGGTGCATGAGCGGTGGTTTGCGTTGAAGGGGTGGAAGAAGGGGG
ATAGGGCGAGATGGGTCGGGAGGTGGAGGGGGAAGTATACTGGATGAACA
AAATTACTGGAGCTCTCATCGACGAAGCAACCCACATCCGGGCCATCGCC
AAAGATGTCGTCCTCTCAGGGACATATTTCTACCCAATTAAGGTTTGGGA
TGGCGGCGTTCGCGCTGGAAATGGTCCCGTTTGTGTCGATTGCGTTTGCG
TTTACGAATACGGTCGGGGCGGCGTTGTGGGCGGCGGATTGGGAGAAATC
GTTGCAGTAGGGAATAATCTACACCCTCAACCGCCCCACCCTCCGCCAAC
CCCTCCTCTCCCGCTCCTCCAAAACCCTCACCCTCGGCGTGGGCGTCACC
ACAGCCATGTTCTTCTTCACTTACGTGCCCCAAGCAGCCATCATGTCCAT
TACCAGTGGGCCCCTCCTCGCCCCCTTCTCCGCCGCATTACTCGTCCTCA
GCGAGTCTTCCACCATCACGACCTTCCTCGCGAGGTCGTTTCTCCTCGCG
GATGCGATCACCGCTACGTTTGATGCGACGCTCGTAGAGATGGGTCAGGA
GAAACTACTTGAACAGTCTGGAAAGAGTAGTGGTGATGATGCTATCTCCC
GCCTCGGGAGCAAGGAAGAAGTCGAGGAAAGACAAACGAACATGTGGAAT
ATGTTGGTGAGGAGTGTGGTATTGCTGCCATTGAACTTCGTTCCTGTTGT
GGGAACGGTGATGTATGTTTATGTGCAGGGGAAGAAGGTCGGTGAGGGGG
TGCATGAGCGGTGGTTTGCGTTGAAGGGGTGGAAGAAGGGGGATAGGGCG
AGATGGGTCGGGAGGTGGAGGGGGAAGTATACTGGATGAACAAAATTACT
GGAGCTCTCATCGACGAAGCAACCCACATCCGGGCCATCGCCAAAGATGT
CGTCCTCTCAGGGACATATTTCTACCCAATTAAGGTTTGGGATGGCGGCG
TTCGCGCTGGAAATGGTCCCGTTTGTGTCGATTGCGTTTGCGTTTACGAA
TACGGTCGGGGCGGCGTTGTGGGCGGCGGATTGGGAGAAATCGTTGCAGT
AGGGAATAATCTACACCCTCAACCGCCCCACCCTCCGCCAACCCCTCCTC
TCCCGCTCCTCCAAAACCCTCACCCTCGGCGTGGGCGTCACCACAGCCAT
GTTCTTCTTCACTTACGTGCCCCAAGCAGCCATCATGTCCATTACCAGTG
GGCCCCTCCTCGCCCCCTTCTCCGCCGCATTACTCGTCCTCAGCGAGTCT
TCCACCATCACGACCTTCCTCGCGAGGTCGTTTCTCCTCGCGGATGCGAT
CACCGCTACGTTTGATGCGACGCTCGTAGAGATGGGTCAGGAGAAACTAC
TTGAACAGTCTGGAAAGAGTAGTGGTGATGATGCTATCTCCCGCCTCGGG
AGCAAGGAAGAAGTCGAGGAAAGACAAACGAACATGTGGAATATGTTGGT
GAGGAGTGTGGTATTGCTGCCATTGAACTTCGTTCCTGTTGTGGGAACGG
TGATGTATGTTTATGTGCAGGGGAAGAAGGTCGGTGAGGGGGTGCATGAG
CGGTGGTTTGCGTTGAAGGGGTGGAAGAAGGGGGATAGGGCGAGATGGGT
CGGGAGGTGGAGGGGGAAGTATACTGGATGAACAAAATTACTGGAGCTCT
CATCGACGAAGCAACCCACATCCGGGCCATCGCCAAAGATGTCGTCCTCT
CAGGGACATATTTCTACCCAATTAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005016KJC3_005016Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005016-T1KJC3_005016-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005016-T1.cdsKJC3_005016-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005016-T1.utr3p1KJC3_005016-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005016-T1.exon3KJC3_005016-T1.exon3Aspergillus niger KJC3exon
KJC3_005016-T1.exon2KJC3_005016-T1.exon2Aspergillus niger KJC3exon
KJC3_005016-T1.exon1KJC3_005016-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005016-T1.utr5p1KJC3_005016-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefPFAM:PF07264
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1364956..1366196 -
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