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KJC3_005021-T1, KJC3_005021-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005021-T1
Unique NameKJC3_005021-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1377439..1379693-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005021-T1 ID=KJC3_005021-T1|Name=KJC3_005021-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2255bp|location=Sequence derived from alignment at ch4:1377439..1379693- (Aspergillus niger KJC3)
CGTAAACAACTTAGTCTAGCACCAACACCAATTCCCTCCCTTCCAGCCCA
TCAGAATTCAGCATTCCCTCTGGACCTCGAGTTCTCCCGTCATTCCGGAA
CTCTTCTATCCATCCCATCCGACGGATCGATCGACATTCCACCCGGACGT
CATGATCCGAGTGAGGTGATCCATCCCAAAGCCACTGAGCGCATCAATAC
TATTCTCTCCTTACTTCCTTCGCATCCCTTCGCATCGCATCGCGTCACAC
AGCATCTCCCAATCAAGAATACCCCTACGCACATATTTTGCACTTCCGTG
CAAAATAACAACTATGGACCACGAAATCCCACTCCCCCCACCACCGCGCA
TCCGCCATCGCGACCCCTCCAACAACAATAACAATCGTCACGCGACTCGC
CCTGCTCACCACCACCGTCTCCCCTCGCGCTTCATTGACGACCGCTCCAG
TCAACCTTCCAGTGATCCAGCGCTTTTCTCCAGTGACGATATCCCCGCCT
CAGGACTAGAGAACTACAATAATGCGCCTGTTAGTCGGAAGCGCCGGTAC
CGCGGCACGTGGTGGGGAGAGATGGTGAAGGACAAGGACGCGAAGCGCAA
ACGGGCGGATTTCAAGGAGAAGCGCTTGGTGGATAGTGGTGTGTGGATGG
GAAGTGATGATTATGACTCTGGTCCGGGGTCGGGGTTCTTGCCTTCTGAT
GCGGATTTGGGAGAGGATTGGCTGAACTCTCATGCGAATGGAGGTTCAAA
GACGGTGACACCGCAGACTCAAAGTCAACAACAAGGATTCAGAAAAGTTG
AGGAAGAACCGCGCGAGCATCAAGTCGCACGGGGAATCGTGAATGATTGT
CTCGAGAGGGGGGAGGATAGTGTTGATTTGAGGTAATCCCCTACATTTCT
TCGCCCATCATCCAGAAACAACCTTAACCTATATCCATGTCTAGCGGCCT
CACCCTCCGCCTCATACCCCCAAACCTCCTCCTCCCCCTCCAACACCTCA
CCAAACTCCCAACCATCAGGGAGCCCCCCATCAGCGAAGACGTCTACACC
TCCCTCCAACCATTCCTCCGCCTCTTCCTCGCCGGCAACGCCCTAACCCA
AGTCCCCGGCGAGATCTTCGACCTCGACTCCCTCCGCGTCCTCAGTCTCC
GCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGCTCCCTCACCCTC
CTCCAGGAACTAAACATCTCCGTGAACCGCCTCCCCACCCTCCCATGGGA
ACTCCTCTTCCTCATCCGCAAAGGCGACCTCAAACACCTTACCGTTCGCC
CGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCCCAATGGCACGTT
CCAACCGACCAAGAGACCCAAGAACCACAACTGAAATCAGTAACATATGA
CGGCCCACCTCCGGAGGAAGCATGGGCACCTGTACACGTCGCTACCGGCC
CAGTTACATACTACAACGCCGAAGGCGTACCAGTCTCCTCCCAAATCCCT
ACTGAACAAACCAACCACCAAACAATAAACACCAGCAGCAGCAGCAGCAT
CTCCCGCGTCCCCTCCCTCCGCGAAATCTCCCTCCTAGCATTCACCCGCT
CGACATACCCGGACCTGATCACAGACGAAGAAATGGAGGATTTCCCGGCC
CTGATGACCCGCTTACTCCGGCAAGCGAAAGAGATTCGTAGCGCGGGGGG
CAGGAACTGCTCGTCATGTCACCGGGGCTTTGTGCTCGCGCGGACAGAGT
GGATCGAGTGGTGGGATGTCAGTACGTATGAGAATGGGTTGAAGGGACCT
AGGGCATCTGGGGAAGTGTTGAGGCCGTTGCCGTTTAGGAGAGTTGGGTG
TAGTTGGGGATGTGTGCCTGAGGTTGTTTGATTCTGATGTCATGACGGGA
ATGTATGTATAGTAAGTTTGGTTGTGGGTATGTATGTATGGATGGATGGA
TGGATGTAAATGATTATATTCTCATTAGGGGTGTGAGTTCTAGAGTAGTG
AGTGTCTGTTTGTAATGTATCCCGCGGGGGGGGGGGGCGGTGTATGACTT
GATGTATATGTCTAAGGAGTTTAGGGATTTGCATGGCTTGATTGTTCCGT
CGGACTTGAGTTATTGGGCGAGTTGATGGCCAGCCGATGTAGATATGCTG
GCATGTGCCCACATTCAAAGTTGTTTAAGGGTCTGATCTTCATTTACTTA
CTACTTACGAGGTGTGTCAAGGTGGTTCGAAACAATGCCAGTTACTTGGA
CAGCG
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Coding sequence (CDS) from alignment at ch4:1377439..1379693-

>KJC3_005021-T1 ID=KJC3_005021-T1|Name=KJC3_005021-T1|organism=Aspergillus niger KJC3|type=CDS|length=3012bp|location=Sequence derived from alignment at ch4:1377439..1379693- (Aspergillus niger KJC3)
CGGCCTCACCCTCCGCCTCATACCCCCAAACCTCCTCCTCCCCCTCCAAC
ACCTCACCAAACTCCCAACCATCAGGGAGCCCCCCATCAGCGAAGACGTC
TACACCTCCCTCCAACCATTCCTCCGCCTCTTCCTCGCCGGCAACGCCCT
AACCCAAGTCCCCGGCGAGATCTTCGACCTCGACTCCCTCCGCGTCCTCA
GTCTCCGCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGCTCCCTC
ACCCTCCTCCAGGAACTAAACATCTCCGTGAACCGCCTCCCCACCCTCCC
ATGGGAACTCCTCTTCCTCATCCGCAAAGGCGACCTCAAACACCTTACCG
TTCGCCCGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCCCAATGG
CACGTTCCAACCGACCAAGAGACCCAAGAACCACAACTGAAATCAGTAAC
ATATGACGGCCCACCTCCGGAGGAAGCATGGGCACCTGTACACGTCGCTA
CCGGCCCAGTTACATACTACAACGCCGAAGGCGTACCAGTCTCCTCCCAA
ATCCCTACTGAACAAACCAACCACCAAACAATAAACACCAGCAGCAGCAG
CAGCATCTCCCGCGTCCCCTCCCTCCGCGAAATCTCCCTCCTAGCATTCA
CCCGCTCGACATACCCGGACCTGATCACAGACGAAGAAATGGAGGATTTC
CCGGCCCTGATGACCCGCTTACTCCGGCAAGCGAAAGAGATTCGTAGCGC
GGGGGGCAGGAACTGCTCGTCATGTCACCGGGGCTTTGTGCTCGCGCGGA
CAGAGTGGATCGAGTGGTGGGATGTCAGTACGTATGAGAATGGGTTGAAG
GGACCTAGGGCATCTGGGGAAGTGTTGAGGCCGTTGCCGTTTAGGAGAGT
TGGGTGTAGTTGGGGATGTGTGCCTGAGGTTGTTTGAATGGACCACGAAA
TCCCACTCCCCCCACCACCGCGCATCCGCCATCGCGACCCCTCCAACAAC
AATAACAATCGTCACGCGACTCGCCCTGCTCACCACCACCGTCTCCCCTC
GCGCTTCATTGACGACCGCTCCAGTCAACCTTCCAGTGATCCAGCGCTTT
TCTCCAGTGACGATATCCCCGCCTCAGGACTAGAGAACTACAATAATGCG
CCTGTTAGTCGGAAGCGCCGGTACCGCGGCACGTGGTGGGGAGAGATGGT
GAAGGACAAGGACGCGAAGCGCAAACGGGCGGATTTCAAGGAGAAGCGCT
TGGTGGATAGTGGTGTGTGGATGGGAAGTGATGATTATGACTCTGGTCCG
GGGTCGGGGTTCTTGCCTTCTGATGCGGATTTGGGAGAGGATTGGCTGAA
CTCTCATGCGAATGGAGGTTCAAAGACGGTGACACCGCAGACTCAAAGTC
AACAACAAGGATTCAGAAAAGTTGAGGAAGAACCGCGCGAGCATCAAGTC
GCACGGGGAATCGTGAATGATTGTCTCGAGAGGGGGGAGGATAGTGTTGA
TTTGAGCGGCCTCACCCTCCGCCTCATACCCCCAAACCTCCTCCTCCCCC
TCCAACACCTCACCAAACTCCCAACCATCAGGGAGCCCCCCATCAGCGAA
GACGTCTACACCTCCCTCCAACCATTCCTCCGCCTCTTCCTCGCCGGCAA
CGCCCTAACCCAAGTCCCCGGCGAGATCTTCGACCTCGACTCCCTCCGCG
TCCTCAGTCTCCGCTACAACAAACTTACCTCCATCCCCCCGGCAATCCGC
TCCCTCACCCTCCTCCAGGAACTAAACATCTCCGTGAACCGCCTCCCCAC
CCTCCCATGGGAACTCCTCTTCCTCATCCGCAAAGGCGACCTCAAACACC
TTACCGTTCGCCCGAACCCCCTCCTCCAAATCGAAGACCAGCCCATCGCC
CAATGGCACGTTCCAACCGACCAAGAGACCCAAGAACCACAACTGAAATC
AGTAACATATGACGGCCCACCTCCGGAGGAAGCATGGGCACCTGTACACG
TCGCTACCGGCCCAGTTACATACTACAACGCCGAAGGCGTACCAGTCTCC
TCCCAAATCCCTACTGAACAAACCAACCACCAAACAATAAACACCAGCAG
CAGCAGCAGCATCTCCCGCGTCCCCTCCCTCCGCGAAATCTCCCTCCTAG
CATTCACCCGCTCGACATACCCGGACCTGATCACAGACGAAGAAATGGAG
GATTTCCCGGCCCTGATGACCCGCTTACTCCGGCAAGCGAAAGAGATTCG
TAGCGCGGGGGGCAGGAACTGCTCGTCATGTCACCGGGGCTTTGTGCTCG
CGCGGACAGAGTGGATCGAGTGGTGGGATGTCAGTACGTATGAGAATGGG
TTGAAGGGACCTAGGGCATCTGGGGAAGTGTTGAGGCCGTTGCCGTTTAG
GAGAGTTGGGTGTAGTTGGGGATGTGTGCCTGAGGTTGTTTGAATGGACC
ACGAAATCCCACTCCCCCCACCACCGCGCATCCGCCATCGCGACCCCTCC
AACAACAATAACAATCGTCACGCGACTCGCCCTGCTCACCACCACCGTCT
CCCCTCGCGCTTCATTGACGACCGCTCCAGTCAACCTTCCAGTGATCCAG
CGCTTTTCTCCAGTGACGATATCCCCGCCTCAGGACTAGAGAACTACAAT
AATGCGCCTGTTAGTCGGAAGCGCCGGTACCGCGGCACGTGGTGGGGAGA
GATGGTGAAGGACAAGGACGCGAAGCGCAAACGGGCGGATTTCAAGGAGA
AGCGCTTGGTGGATAGTGGTGTGTGGATGGGAAGTGATGATTATGACTCT
GGTCCGGGGTCGGGGTTCTTGCCTTCTGATGCGGATTTGGGAGAGGATTG
GCTGAACTCTCATGCGAATGGAGGTTCAAAGACGGTGACACCGCAGACTC
AAAGTCAACAACAAGGATTCAGAAAAGTTGAGGAAGAACCGCGCGAGCAT
CAAGTCGCACGGGGAATCGTGAATGATTGTCTCGAGAGGGGGGAGGATAG
TGTTGATTTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005021KJC3_005021Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005021-T1KJC3_005021-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005021-T1.cdsKJC3_005021-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005021-T1.utr3p1KJC3_005021-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005021-T1.exon2KJC3_005021-T1.exon2Aspergillus niger KJC3exon
KJC3_005021-T1.exon1KJC3_005021-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005021-T1.utr5p1KJC3_005021-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR003591
DBxrefPFAM:PF13855
DBxrefPFAM:PF12799
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1377439..1379693 -
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