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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1385280..1387969- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005024-T1 ID=KJC3_005024-T1|Name=KJC3_005024-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2690bp|location=Sequence derived from alignment at ch4:1385280..1387969- (Aspergillus niger KJC3)
CCAGCTTGAACTCTTATCCATCTTATCTTCCATCATCAGTGCCATGTCCG
TGGGTCTCGATGTTATCACGGCCCGCTTGTCACCGTCACTAGGAACCATA
ACAAGATCATTGCGTTGAAATCGGGTCCTTTCGGGCCCCCCGGGAAAATA
GCAGACCACCAGCACTTCGCGGAACAGTGGGGGCTACAAGTCGTCATGGT
GCAATGAGGAGCCAGGAAACAAATTAGGGGAGGAGTCTCTAAGTGGAGCA
GGGACACCAGACCCTTGCACCAGCATTAGGAGACTACTACAACATACTAT
ATGAAATCATCGTGAGCTCGATGCAATGTTCTAGATGTATGTAAATGTGG
CAAAATCAACCGTTTTTGCAGGAAAACCTTTGGGGAAGGTTCTCCTGATG
GAACCACACTGAGACAAGCTGCGAGAATTATCTGATCCGAAGTGGAACGG
GGTGTCGCCAGCTTGCCAAGAGGACAAGACTGCCTAGAGTTCCACTACCA
CTGTAAGCCTGAACCAGCACCCACAGCCAGCGCAAATTCCTTCTCGCGTT
GGCCGCTCAGGAAATTGGGACTTGGAAAGCTTTGGGATGGTGTGGGACGT
GCGTGGGAGGCGAAGAAATCATCGTCCCATGTCAAGCCTTTATAACATGG
CGCATATCCTTCCTCGATGCCGATCAGTTCTTGAAACTTTCTCTTACCAC
TGATGATATAGCACTTTGGGCATAATTGCTGTGCTTTTCCCCTCAAAAAT
GGCCACTGACAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGATCT
CTTTGGATCCCGATACTCCTCAACAGCCTGTCGAGGATGAACAGGATAAG
CAGGATGGTGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAGAA
ATCTCTGATTATCACTTATGCTTCGTGAGTGGCTTGATTTCTGTTCCTCT
GGAGCGACTGCTGAACGGTGTATAGCATGTGGCTCTTGTATTTCGTCAAT
GGATTGAACAGCAGCTTGACCGCGAACCTTTCCGCGTATATCACCAGTGA
TTTCTCTGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGTCA
TGGGTGCTGCTTGTGTCATGCCTATTGCTAAGGTACTGAACCTGTGGGAT
CGTACATTGGGTGTCTGCATCATGGTGTTGATTGCTATCATGGGCCTGAT
TATGATGGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGGTGA
GTTTTTACCCTCTGTGTATACGAGATCGATCATTCTTATCGTCTCATCTG
CTATGCTTCAAGAATGCCCAAGCGTACTAAATCCGCGACACTAATAGGCA
TTCTACACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACGTGATGAC
CTCCGATACATCCTCGCTCCGCAATCGAGGTATCGCCTACGCCTTCACCT
CCTCTCCCTACATTATCACTGCCTTTGCCGGCTCTCCCCTCTCCAACCAG
TTCCACGAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCATTATCCT
TCCCATCGTCGCAATGCCTCTGGTCATAACCTGGGAACTGGCGAAGCGCA
AGGCAGACAAGGAGGGTCGCTTGCAATACAAGCCGCGAAGCACCCGGACC
TGGTGGCAGAGCACCTGGTTCTACATCATCGAGTTTGACAGTAAGTCGTC
TCCCCAATAAACCTCTACTACCCCAACGCCCCCGACTAACACGCTCTTCC
TCAACCAGTCATCGGCATCCTCTTCATGATCGGCGGACTTATCCTCTTCC
TCACCTCGTTCAACATCGCCGGAAACACCGAAGGCGAGTGGAAATCCGCC
AAGATCATCGCAATGATGATCGTCGGTTTCTTCGTCCTCGTCGGCTTCGT
CGCCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTACCACCTCC
TCGCCAACCGCACCGTCATCGGCGCCTGCCTCCTGGACATAACCTACCAA
GTCTCCTACTACTGCTGGGCCAGCTACTTCACCTCCTTCCTGCAAGTGGT
CTACAACACCAGTCTCACCCAAGCCGGATACATCAGCGCCATCTTCGACC
TCATGGACCCCATCTGGCTGATCGGCTGCGGGTATCTGATCCGCGTCACC
GGCCGCTTCAAGTGGCTTCTTATGTGGGCTGTCCCGCTCTACCTCCTGGC
CAGCGGCTTGATGATCTACTTCCGCCAGCCCGGCTTCAGCATTGGATACA
TGTGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCTTGATTCTT
ATTGAGCAGGTTGCTGTCCTGGCGGCATCTAGACATGAGGACTACGCTGC
TATGTTGGCGTTGCTGAGCACTTTTGGTAATCTGGGTGGTGCTGTCGGTA
GTAGTGTCTCCGGTGCTATTTGGACTAACACCCTTCCTCAGAAGCTGAGG
GAGCTGTTGCCCGCTGAGACGAAGGATCAGTGGGCGGAGATTTATGAGTC
GTTGGATGTGCAACTGAGTTATCCGGTTGGGTCCGAGACTCGTATTGCGA
TTCAGAATGCTTATGCTTGGAGTCAGCGCAATATGATGATTGCGGGTACT
GCTGTCATGGGGTTGTCGATTGCTTGGGTGTTGATGATGAGGAATATTAA
GATTAAGGATAATAAGGATGTGAGGCAGGTCCTGTTCTAG back to topCoding sequence (CDS) from alignment at ch4:1385280..1387969- >KJC3_005024-T1 ID=KJC3_005024-T1|Name=KJC3_005024-T1|organism=Aspergillus niger KJC3|type=CDS|length=6888bp|location=Sequence derived from alignment at ch4:1385280..1387969- (Aspergillus niger KJC3)
TCATCGGCATCCTCTTCATGATCGGCGGACTTATCCTCTTCCTCACCTCG
TTCAACATCGCCGGAAACACCGAAGGCGAGTGGAAATCCGCCAAGATCAT
CGCAATGATGATCGTCGGTTTCTTCGTCCTCGTCGGCTTCGTCGCCTACG
AGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTACCACCTCCTCGCCAAC
CGCACCGTCATCGGCGCCTGCCTCCTGGACATAACCTACCAAGTCTCCTA
CTACTGCTGGGCCAGCTACTTCACCTCCTTCCTGCAAGTGGTCTACAACA
CCAGTCTCACCCAAGCCGGATACATCAGCGCCATCTTCGACCTCATGGAC
CCCATCTGGCTGATCGGCTGCGGGTATCTGATCCGCGTCACCGGCCGCTT
CAAGTGGCTTCTTATGTGGGCTGTCCCGCTCTACCTCCTGGCCAGCGGCT
TGATGATCTACTTCCGCCAGCCCGGCTTCAGCATTGGATACATGTGCATG
TGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCTTGATTCTTATTGAGCA
GGTTGCTGTCCTGGCGGCATCTAGACATGAGGACTACGCTGCTATGTTGG
CGTTGCTGAGCACTTTTGGTAATCTGGGTGGTGCTGTCGGTAGTAGTGTC
TCCGGTGCTATTTGGACTAACACCCTTCCTCAGAAGCTGAGGGAGCTGTT
GCCCGCTGAGACGAAGGATCAGTGGGCGGAGATTTATGAGTCGTTGGATG
TGCAACTGAGTTATCCGGTTGGGTCCGAGACTCGTATTGCGATTCAGAAT
GCTTATGCTTGGAGTCAGCGCAATATGATGATTGCGGGTACTGCTGTCAT
GGGGTTGTCGATTGCTTGGGTGTTGATGATGAGGAATATTAAGATTAAGG
ATAATAAGGATGTGAGGCAGGTCCTGTTCTAGGCATTCTACACCGTCGGA
TTCACCGGTGTCATCTTCTGTGTCGACGTGATGACCTCCGATACATCCTC
GCTCCGCAATCGAGGTATCGCCTACGCCTTCACCTCCTCTCCCTACATTA
TCACTGCCTTTGCCGGCTCTCCCCTCTCCAACCAGTTCCACGAGACCAAC
TGGCGCTGGGCCTACGGAACCATCTGCATTATCCTTCCCATCGTCGCAAT
GCCTCTGGTCATAACCTGGGAACTGGCGAAGCGCAAGGCAGACAAGGAGG
GTCGCTTGCAATACAAGCCGCGAAGCACCCGGACCTGGTGGCAGAGCACC
TGGTTCTACATCATCGAGTTTGACACATGTGGCTCTTGTATTTCGTCAAT
GGATTGAACAGCAGCTTGACCGCGAACCTTTCCGCGTATATCACCAGTGA
TTTCTCTGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGTCA
TGGGTGCTGCTTGTGTCATGCCTATTGCTAAGGTACTGAACCTGTGGGAT
CGTACATTGGGTGTCTGCATCATGGTGTTGATTGCTATCATGGGCCTGAT
TATGATGGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGATGG
CCACTGACAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGATCTCT
TTGGATCCCGATACTCCTCAACAGCCTGTCGAGGATGAACAGGATAAGCA
GGATGGTGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAGAAAT
CTCTGATTATCACTTATGCTTCTCATCGGCATCCTCTTCATGATCGGCGG
ACTTATCCTCTTCCTCACCTCGTTCAACATCGCCGGAAACACCGAAGGCG
AGTGGAAATCCGCCAAGATCATCGCAATGATGATCGTCGGTTTCTTCGTC
CTCGTCGGCTTCGTCGCCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCAT
TCCCTACCACCTCCTCGCCAACCGCACCGTCATCGGCGCCTGCCTCCTGG
ACATAACCTACCAAGTCTCCTACTACTGCTGGGCCAGCTACTTCACCTCC
TTCCTGCAAGTGGTCTACAACACCAGTCTCACCCAAGCCGGATACATCAG
CGCCATCTTCGACCTCATGGACCCCATCTGGCTGATCGGCTGCGGGTATC
TGATCCGCGTCACCGGCCGCTTCAAGTGGCTTCTTATGTGGGCTGTCCCG
CTCTACCTCCTGGCCAGCGGCTTGATGATCTACTTCCGCCAGCCCGGCTT
CAGCATTGGATACATGTGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCG
GTACCTTGATTCTTATTGAGCAGGTTGCTGTCCTGGCGGCATCTAGACAT
GAGGACTACGCTGCTATGTTGGCGTTGCTGAGCACTTTTGGTAATCTGGG
TGGTGCTGTCGGTAGTAGTGTCTCCGGTGCTATTTGGACTAACACCCTTC
CTCAGAAGCTGAGGGAGCTGTTGCCCGCTGAGACGAAGGATCAGTGGGCG
GAGATTTATGAGTCGTTGGATGTGCAACTGAGTTATCCGGTTGGGTCCGA
GACTCGTATTGCGATTCAGAATGCTTATGCTTGGAGTCAGCGCAATATGA
TGATTGCGGGTACTGCTGTCATGGGGTTGTCGATTGCTTGGGTGTTGATG
ATGAGGAATATTAAGATTAAGGATAATAAGGATGTGAGGCAGGTCCTGTT
CTAGGCATTCTACACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACG
TGATGACCTCCGATACATCCTCGCTCCGCAATCGAGGTATCGCCTACGCC
TTCACCTCCTCTCCCTACATTATCACTGCCTTTGCCGGCTCTCCCCTCTC
CAACCAGTTCCACGAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCA
TTATCCTTCCCATCGTCGCAATGCCTCTGGTCATAACCTGGGAACTGGCG
AAGCGCAAGGCAGACAAGGAGGGTCGCTTGCAATACAAGCCGCGAAGCAC
CCGGACCTGGTGGCAGAGCACCTGGTTCTACATCATCGAGTTTGACACAT
GTGGCTCTTGTATTTCGTCAATGGATTGAACAGCAGCTTGACCGCGAACC
TTTCCGCGTATATCACCAGTGATTTCTCTGAGCACTCGTTGCTCACTGTG
ATTACTGTCGTTACTAGTGTCATGGGTGCTGCTTGTGTCATGCCTATTGC
TAAGGTACTGAACCTGTGGGATCGTACATTGGGTGTCTGCATCATGGTGT
TGATTGCTATCATGGGCCTGATTATGATGGCTGGCTGCAACAACATTGCC
ACGTACTGTGCTGCTCAGATGGCCACTGACAAGCCTCCCACCACTACCGG
GGTCAGTGAGGATCCGATCTCTTTGGATCCCGATACTCCTCAACAGCCTG
TCGAGGATGAACAGGATAAGCAGGATGGTGTTCGTGTCGCCGAAGCAGTT
ACTGCTTCTTGGTCGAAGAAATCTCTGATTATCACTTATGCTTCTCATCG
GCATCCTCTTCATGATCGGCGGACTTATCCTCTTCCTCACCTCGTTCAAC
ATCGCCGGAAACACCGAAGGCGAGTGGAAATCCGCCAAGATCATCGCAAT
GATGATCGTCGGTTTCTTCGTCCTCGTCGGCTTCGTCGCCTACGAGCGCT
GGGGAGCCCCCAAGCCCTTCATTCCCTACCACCTCCTCGCCAACCGCACC
GTCATCGGCGCCTGCCTCCTGGACATAACCTACCAAGTCTCCTACTACTG
CTGGGCCAGCTACTTCACCTCCTTCCTGCAAGTGGTCTACAACACCAGTC
TCACCCAAGCCGGATACATCAGCGCCATCTTCGACCTCATGGACCCCATC
TGGCTGATCGGCTGCGGGTATCTGATCCGCGTCACCGGCCGCTTCAAGTG
GCTTCTTATGTGGGCTGTCCCGCTCTACCTCCTGGCCAGCGGCTTGATGA
TCTACTTCCGCCAGCCCGGCTTCAGCATTGGATACATGTGCATGTGCCAG
ATCTTCCTGGCTGTTGGTGGCGGTACCTTGATTCTTATTGAGCAGGTTGC
TGTCCTGGCGGCATCTAGACATGAGGACTACGCTGCTATGTTGGCGTTGC
TGAGCACTTTTGGTAATCTGGGTGGTGCTGTCGGTAGTAGTGTCTCCGGT
GCTATTTGGACTAACACCCTTCCTCAGAAGCTGAGGGAGCTGTTGCCCGC
TGAGACGAAGGATCAGTGGGCGGAGATTTATGAGTCGTTGGATGTGCAAC
TGAGTTATCCGGTTGGGTCCGAGACTCGTATTGCGATTCAGAATGCTTAT
GCTTGGAGTCAGCGCAATATGATGATTGCGGGTACTGCTGTCATGGGGTT
GTCGATTGCTTGGGTGTTGATGATGAGGAATATTAAGATTAAGGATAATA
AGGATGTGAGGCAGGTCCTGTTCTAGGCATTCTACACCGTCGGATTCACC
GGTGTCATCTTCTGTGTCGACGTGATGACCTCCGATACATCCTCGCTCCG
CAATCGAGGTATCGCCTACGCCTTCACCTCCTCTCCCTACATTATCACTG
CCTTTGCCGGCTCTCCCCTCTCCAACCAGTTCCACGAGACCAACTGGCGC
TGGGCCTACGGAACCATCTGCATTATCCTTCCCATCGTCGCAATGCCTCT
GGTCATAACCTGGGAACTGGCGAAGCGCAAGGCAGACAAGGAGGGTCGCT
TGCAATACAAGCCGCGAAGCACCCGGACCTGGTGGCAGAGCACCTGGTTC
TACATCATCGAGTTTGACACATGTGGCTCTTGTATTTCGTCAATGGATTG
AACAGCAGCTTGACCGCGAACCTTTCCGCGTATATCACCAGTGATTTCTC
TGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGTCATGGGTG
CTGCTTGTGTCATGCCTATTGCTAAGGTACTGAACCTGTGGGATCGTACA
TTGGGTGTCTGCATCATGGTGTTGATTGCTATCATGGGCCTGATTATGAT
GGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGATGGCCACTG
ACAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGATCTCTTTGGAT
CCCGATACTCCTCAACAGCCTGTCGAGGATGAACAGGATAAGCAGGATGG
TGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAGAAATCTCTGA
TTATCACTTATGCTTCTCATCGGCATCCTCTTCATGATCGGCGGACTTAT
CCTCTTCCTCACCTCGTTCAACATCGCCGGAAACACCGAAGGCGAGTGGA
AATCCGCCAAGATCATCGCAATGATGATCGTCGGTTTCTTCGTCCTCGTC
GGCTTCGTCGCCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTA
CCACCTCCTCGCCAACCGCACCGTCATCGGCGCCTGCCTCCTGGACATAA
CCTACCAAGTCTCCTACTACTGCTGGGCCAGCTACTTCACCTCCTTCCTG
CAAGTGGTCTACAACACCAGTCTCACCCAAGCCGGATACATCAGCGCCAT
CTTCGACCTCATGGACCCCATCTGGCTGATCGGCTGCGGGTATCTGATCC
GCGTCACCGGCCGCTTCAAGTGGCTTCTTATGTGGGCTGTCCCGCTCTAC
CTCCTGGCCAGCGGCTTGATGATCTACTTCCGCCAGCCCGGCTTCAGCAT
TGGATACATGTGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCT
TGATTCTTATTGAGCAGGTTGCTGTCCTGGCGGCATCTAGACATGAGGAC
TACGCTGCTATGTTGGCGTTGCTGAGCACTTTTGGTAATCTGGGTGGTGC
TGTCGGTAGTAGTGTCTCCGGTGCTATTTGGACTAACACCCTTCCTCAGA
AGCTGAGGGAGCTGTTGCCCGCTGAGACGAAGGATCAGTGGGCGGAGATT
TATGAGTCGTTGGATGTGCAACTGAGTTATCCGGTTGGGTCCGAGACTCG
TATTGCGATTCAGAATGCTTATGCTTGGAGTCAGCGCAATATGATGATTG
CGGGTACTGCTGTCATGGGGTTGTCGATTGCTTGGGTGTTGATGATGAGG
AATATTAAGATTAAGGATAATAAGGATGTGAGGCAGGTCCTGTTCTAGGC
ATTCTACACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACGTGATGA
CCTCCGATACATCCTCGCTCCGCAATCGAGGTATCGCCTACGCCTTCACC
TCCTCTCCCTACATTATCACTGCCTTTGCCGGCTCTCCCCTCTCCAACCA
GTTCCACGAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCATTATCC
TTCCCATCGTCGCAATGCCTCTGGTCATAACCTGGGAACTGGCGAAGCGC
AAGGCAGACAAGGAGGGTCGCTTGCAATACAAGCCGCGAAGCACCCGGAC
CTGGTGGCAGAGCACCTGGTTCTACATCATCGAGTTTGACACATGTGGCT
CTTGTATTTCGTCAATGGATTGAACAGCAGCTTGACCGCGAACCTTTCCG
CGTATATCACCAGTGATTTCTCTGAGCACTCGTTGCTCACTGTGATTACT
GTCGTTACTAGTGTCATGGGTGCTGCTTGTGTCATGCCTATTGCTAAGGT
ACTGAACCTGTGGGATCGTACATTGGGTGTCTGCATCATGGTGTTGATTG
CTATCATGGGCCTGATTATGATGGCTGGCTGCAACAACATTGCCACGTAC
TGTGCTGCTCAGATGGCCACTGACAAGCCTCCCACCACTACCGGGGTCAG
TGAGGATCCGATCTCTTTGGATCCCGATACTCCTCAACAGCCTGTCGAGG
ATGAACAGGATAAGCAGGATGGTGTTCGTGTCGCCGAAGCAGTTACTGCT
TCTTGGTCGAAGAAATCTCTGATTATCACTTATGCTTC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005024-T1.utr5p1 | KJC3_005024-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1385280..1387969 - |
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