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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1390108..1391364- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005025-T1 ID=KJC3_005025-T1|Name=KJC3_005025-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1257bp|location=Sequence derived from alignment at ch4:1390108..1391364- (Aspergillus niger KJC3)
ATCAGTCAATGCTTGGCTATGGATGTTGTTCAAAGATGGAGGCTCTGCCA
TCATTCGATTTCCATGTTCCGAGAAGAGAAAATCCAGCGCGAAGTGGCAG
TGATGCATTTTCTGGAGTATTTTACAAATCTACGCATACCTCACATCCTT
CACCATGGAATGACAAAGGAGAGTCCAAAAGAACTTGGACCCTTCATCAT
CATGGAGCACATAAGCAACGAAGGCGACTTCATCGATGCCCTCATACCGG
GCCGGTCACGCGACGACAGACCGATCTTAGACCCAAACGTGTCACAAGAG
CGACTTGAATGGATCTATGGTCAGATGGCAGATATCGTGCTCCAGGTATC
GAGGCATTCGTTTGCGGAGATTGGCTGCATCGGCAAAGCTAAAGAAAATG
ACGAATGCGATGATACGTGGATTGTTAAGCACCGTCCCCTCACTTTCAAC
ATGAACGAGCTCGTCCAACTAGGCGGGGTTTCGCCTGACCTTCTTCCTCA
GGGCACGTTCAAAACAGCGTCATCTTATTACCGAGCACTGGCTGAGATGC
ACATGATCCATCTGTCTTCCCAACGGAACGATGCTATCGACTCTGCGGAA
GACTGCCGAAACAAGTACATCGCAAGATGTCTATTCCGCAAGATCGCTCG
CGAACATCAGCTTTGCCAGGACGACTCTGGCCCATTTAGATTGTTCTGTG
ATGACCTTAGACCCGGCAACGTCCTTGCGAACGACCAACACCAGATGACT
GGCGTAGTGGACTGGGAATTTACCTACGCGGCGCCTACTGGATTCGCCCA
CAGTCCACCCTTTTGGTTGCTACTCGAGCTTCCAGAACTCTGGAAACCGG
GTTTGGATGATTGGACGGCAAAATATGAGAAGGTGTTGCCGACGTTCCTG
AAAGTGCTTAAGAATAAGGAGCAAGCAGCTATTGACCGAGGGACTCTAAA
AGAGGCCGATCGGCTTTCGGAGCACATGTGGAGAAGCTGGCAAAGTGGCG
ATTTCTGGCTCAACTATGCCGCGAGAAAGAGCTGGGCATTCGACATGATA
TACTGGGCTAAGATTGATCGGAGGTTCTTTGGTGGTGGCGATCTGAACGA
TCGGATCAAGCTTCTGACACCTGAAGAAAGAGAAGAGATGGATAAGTTCG
TTCAGATAAAATTGAAGGCTAAGGAGGAAGGCGGGCTGTCTAATTAGGAA
GTTCTTTTTTTATTCCTTTTTGCACCTAAGCCAGCACCGTTAGATATCAA
TAAGTAC back to topCoding sequence (CDS) from alignment at ch4:1390108..1391364- >KJC3_005025-T1 ID=KJC3_005025-T1|Name=KJC3_005025-T1|organism=Aspergillus niger KJC3|type=CDS|length=1179bp|location=Sequence derived from alignment at ch4:1390108..1391364- (Aspergillus niger KJC3)
ATGGATGTTGTTCAAAGATGGAGGCTCTGCCATCATTCGATTTCCATGTT
CCGAGAAGAGAAAATCCAGCGCGAAGTGGCAGTGATGCATTTTCTGGAGT
ATTTTACAAATCTACGCATACCTCACATCCTTCACCATGGAATGACAAAG
GAGAGTCCAAAAGAACTTGGACCCTTCATCATCATGGAGCACATAAGCAA
CGAAGGCGACTTCATCGATGCCCTCATACCGGGCCGGTCACGCGACGACA
GACCGATCTTAGACCCAAACGTGTCACAAGAGCGACTTGAATGGATCTAT
GGTCAGATGGCAGATATCGTGCTCCAGGTATCGAGGCATTCGTTTGCGGA
GATTGGCTGCATCGGCAAAGCTAAAGAAAATGACGAATGCGATGATACGT
GGATTGTTAAGCACCGTCCCCTCACTTTCAACATGAACGAGCTCGTCCAA
CTAGGCGGGGTTTCGCCTGACCTTCTTCCTCAGGGCACGTTCAAAACAGC
GTCATCTTATTACCGAGCACTGGCTGAGATGCACATGATCCATCTGTCTT
CCCAACGGAACGATGCTATCGACTCTGCGGAAGACTGCCGAAACAAGTAC
ATCGCAAGATGTCTATTCCGCAAGATCGCTCGCGAACATCAGCTTTGCCA
GGACGACTCTGGCCCATTTAGATTGTTCTGTGATGACCTTAGACCCGGCA
ACGTCCTTGCGAACGACCAACACCAGATGACTGGCGTAGTGGACTGGGAA
TTTACCTACGCGGCGCCTACTGGATTCGCCCACAGTCCACCCTTTTGGTT
GCTACTCGAGCTTCCAGAACTCTGGAAACCGGGTTTGGATGATTGGACGG
CAAAATATGAGAAGGTGTTGCCGACGTTCCTGAAAGTGCTTAAGAATAAG
GAGCAAGCAGCTATTGACCGAGGGACTCTAAAAGAGGCCGATCGGCTTTC
GGAGCACATGTGGAGAAGCTGGCAAAGTGGCGATTTCTGGCTCAACTATG
CCGCGAGAAAGAGCTGGGCATTCGACATGATATACTGGGCTAAGATTGAT
CGGAGGTTCTTTGGTGGTGGCGATCTGAACGATCGGATCAAGCTTCTGAC
ACCTGAAGAAAGAGAAGAGATGGATAAGTTCGTTCAGATAAAATTGAAGG
CTAAGGAGGAAGGCGGGCTGTCTAATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005025-T1.utr3p1 | KJC3_005025-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005025-T1.utr5p1 | KJC3_005025-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1390108..1391364 - |
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