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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1403465..1406944+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005033-T1 ID=KJC3_005033-T1|Name=KJC3_005033-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3480bp|location=Sequence derived from alignment at ch4:1403465..1406944+ (Aspergillus niger KJC3)
GTTGGTGGCTCTCCCCATGAAGTCTGCTCCTGAATCGTCTGATCTAGTGC
CTCGACTTACCATTTCGGCGGCTTAGGAGCCTGTGCAAGGCGGTAGTTCC
GTCTCGTGCCTCCGTCTTCTTCGCTGCCCGGTCGCTTGGTCCGTTCACTC
CTCGGTTCGGGCCAAGACCTCCACGCCTCCTTGGTCAGGACTGAAGCGCC
TTCTTGCCTCCCCATCAGATCCCTTTTTAGACTCAACTGTTCATACTCAT
CCTGCCGTGGTAAGTTTGACTTGCTAGCTGTTGGGTCTCGTGTGTCCCTC
GACGATGGCAGGTGCTGTTGCGTCGATGCGGAACCGGAGTCGATGTTTAT
ATGAGGGTCGTCCGGACAATTGCTAACGTGACCTTTTACCAGCCGAACGG
ACTGTATTCACGATATTTCCGCGCGCCTACCGTCGCTACAAACATTTTTG
CCTTCGAGGTCCGTCGCGACGGGCACTCACGGGCGGCTAGCATCCGAACA
CTTCTCCTTGCATACTTTGACGATCCTCTTTTTCCGTTGAGCGGACGAGC
GCCTATGAGATAGAGCTCCTTTCCATCACACTCACCATACGGTATCCTTC
TCCATGACTGCTGTGGCGTCACCACCTAGTGTGCAATCGGGCCCTCACTT
GGGATGGTTCGACTCTGGTAACGGGGGACAAGGTGCTCTGTCTTCAATGG
ACGCGGAAGAAGTTTCACGCACATTTTTGCCGCGAAGGACTGTTCAGAGA
TCGAATTCCTCCTCTTCCCTAGCATCTACTTCATCAACCTCGACCGCTAT
AGTTACGCCGCAACCCCCTAATGCGGGACACGTGAACAACGTTGAACACG
CTACATGGTCAGCAAAGAAGAAACCCTCAAGAAATAACTGGACAAATTCT
AAGTCAGAGCCGGTGGCTGGGCTGAGCAACGCCCGCTCCCAGGCCATGCC
GGCCTTTTCTTCGGGCCCAGGAGCCTCTTCTACTATGACCGCGATCCACC
AGCCGTCTTCCATTGTTCCATCTCAACACATGCTTCAAGCATCACAGCAA
AATGGCGTACGCGCCGCAAGCGCACCAGCAGGCGACCCCCCCGCCATCCT
TACACTCCTACCCATCAACGGTACCTTCGACAAGAAGCAGATAAACGTAC
CGTTTTATCCGGATCTACTACGCATAGGTCGCCAGACAAATGCCAAGACC
GTGCCAACACCGGTGAACGGCTACTTCGATTCCAAGGTGCTGTCTCGGCA
GCACGCCGAAATCTGGGCAGACAAAAGCGGAAAGATCTGGATCAGGGATG
TTAAGTCCTCAAATGGTACATTCGTTAATGGGCAGCGGCTGTCTCCAGAG
AACCGCGAATCAGAGCCCCATGAGCTTCGCGAGAACGATACTTTAGAGCT
GGGAATTGATATCGTCAGCGAGGACCAGAAAACGGTTGTCCATCATAAGG
TTTCCGCCAAGGTTGAGCATGCCGGCGTATACAGCAGCATTCCGAATATT
CTGGACCTCACCCTAGGCGACTTGGATCCTGCTTCTGGAAATGGACTGCT
CCCGTCTCCCCTTAGTCAACCGATGTCGCATCTCAGGGGGCGATCGGGAA
GCAACATGAGCAACCGCAGTGCCCAGAGTGCAGCTAGCAGCCAATTCAAC
GCAATTCAACAACAACGTCAGATGAACTACTGGAATTCACCTATATCTAT
TGAACAAGTTGTCAAGCGACTTACGGTATGTCATTCGGATCACATTCGCA
GCGAGCTTGCTCTAACGAGTTTTCAGAGTGAAATGAAACAGGCTAAACAG
CAATCTCAAGAGCTCCGGCAAACCGACGAGTTCTTGACTGCCATAATGAA
ACCCGGATATGTGGAGAAGGAGAAAGCGAAGCCTCCACCAGTGGATAACA
ACGCTCCCCGTCCAGTAAACGGGCGGCCAAAGATGCCTCGCGTAGATTCT
TTCTCTCGCTTTTCCGACCCTCCAGCTCCTCCACCGCAACAACCATTGCC
CGAAAAGCCCGATGCTCTGCCGCGGAATGGCACAGACGCCCTATCGCCGT
TGAAGCGATCCGAGACAGAAAAGTCTAAGCTTGGCCCCAACTCGCCTGTT
ACACGTGAGAATAGCCAGATCTTGTCCCTCATTGAGGCTCTGTCCTCCGC
CAAAAGGGAGCTCGATAGCCAGGGCGCTCGTGTCAAGGAGCTTGAAGCGT
TACTTATTCAGGAAAGAAATGCTCGCGAATCTGCTGAGGAGAAGGCCCGG
AGCCTGGAAATGAAATCCACTCAATTTGCTCCAGGCCCAACCGCAGATGC
CGAACCTGAAGACGATAGCACTAAGAAACCGACTGAAATGGAAGAGCCAA
AGACTATGCCGCCGGATGCCGACATTTCAACCGATTCCGATGCACCCACT
TCTGAAAAGCAGTCTTTGGCAGAAAGCCAAACAGATGTTTTACAACGTCG
TCTCGAGTCAATGATACTGGAGATGGAGGAGATGAAGAAGCAAGTCACGA
TGTTCAAAGACCGGGCAGATGTCGCGGAGAATGAGGCTGTCGAGGCGCGG
AAGTCGCTGGCGGAGATGATTGAAACTTTGCGGCAAGAGCGCGCAGAGCG
TGCTCAGGGCAACGCAGTGTCCGGTGCGCAGACAGATGCTCCTGCTTCTG
CTGGTTCTTCATCTGAGCCGCGAGAGTCTGCCGAAGAGACAGGCAGCGTG
TGCGCCGAGCAATCACAGCCCACCACTGCGACGCCGTCAGGTACAAAAGC
GGTGGACAATGCAGATACGACATTTGCGACACAATCACACCGCCATGACG
TCTTGGAGCAATCCAGTCCATTTGCGTCTATGCTTGGAGTGGTGCTTCTA
GGCGTTGGGTTGATGGCTTACCTGAATGGCTGGCAGAAGATGGACAAATG
ATCATTTTGGCAAGCACATCCTGCCTTCTGCTGGCGCATGTCACAAATTG
TGCATTCAATAGCACCTTGAAAAGCTTATCTTGTTCTTCAAGTTACCAAC
CTCCGATCCTTTTATACCTTTTCTTTCTGATTCTCCGCTGGTTCTGTTTT
CTAGTTCGTCCCATCCTGTATTCTGCTCCGACGCTCAGCAGGGATTGTGC
GCTGGGTCTATGGGTTGATTCTTCTTCGTTCCCCGTTATTTCCGTTTATT
CCCTCTTCTTGACCTCCTCTTATGTGCAGTTATCCTTTTTGCATAACTTG
CATGACCCTCTCTCACTTTTCTTGTTTGTTCCTAGATATCACTCCTCGTG
GGCGCCCTGTTGTACCAGTAACGATTTCCTGGCAGCAGTGGGATTTCTTT
CTATGTCAATGTCTCTTTCTCACGGGCAGAAGCAGGTCGTGTAAAAGGCT
CACCCGCCTTTGTGTGTATTAGTCTATCATAGCATACTCCTTTTTTTCAG
CCGAGCGATGAATGACCATTTCATGCTTTTCTTGTTTTACTTGACGACCT
ATATCCAGGCCGATCTCATCAATTGCGTAT back to topCoding sequence (CDS) from alignment at ch4:1403465..1406944+ >KJC3_005033-T1 ID=KJC3_005033-T1|Name=KJC3_005033-T1|organism=Aspergillus niger KJC3|type=CDS|length=4494bp|location=Sequence derived from alignment at ch4:1403465..1406944+ (Aspergillus niger KJC3)
ATGACTGCTGTGGCGTCACCACCTAGTGTGCAATCGGGCCCTCACTTGGG
ATGGTTCGACTCTGGTAACGGGGGACAAGGTGCTCTGTCTTCAATGGACG
CGGAAGAAGTTTCACGCACATTTTTGCCGCGAAGGACTGTTCAGAGATCG
AATTCCTCCTCTTCCCTAGCATCTACTTCATCAACCTCGACCGCTATAGT
TACGCCGCAACCCCCTAATGCGGGACACGTGAACAACGTTGAACACGCTA
CATGGTCAGCAAAGAAGAAACCCTCAAGAAATAACTGGACAAATTCTAAG
TCAGAGCCGGTGGCTGGGCTGAGCAACGCCCGCTCCCAGGCCATGCCGGC
CTTTTCTTCGGGCCCAGGAGCCTCTTCTACTATGACCGCGATCCACCAGC
CGTCTTCCATTGTTCCATCTCAACACATGCTTCAAGCATCACAGCAAAAT
GGCGTACGCGCCGCAAGCGCACCAGCAGGCGACCCCCCCGCCATCCTTAC
ACTCCTACCCATCAACGGTACCTTCGACAAGAAGCAGATAAACGTACCGT
TTTATCCGGATCTACTACGCATAGGTCGCCAGACAAATGCCAAGACCGTG
CCAACACCGGTGAACGGCTACTTCGATTCCAAGGTGCTGTCTCGGCAGCA
CGCCGAAATCTGGGCAGACAAAAGCGGAAAGATCTGGATCAGGGATGTTA
AGTCCTCAAATGGTACATTCGTTAATGGGCAGCGGCTGTCTCCAGAGAAC
CGCGAATCAGAGCCCCATGAGCTTCGCGAGAACGATACTTTAGAGCTGGG
AATTGATATCGTCAGCGAGGACCAGAAAACGGTTGTCCATCATAAGGTTT
CCGCCAAGGTTGAGCATGCCGGCGTATACAGCAGCATTCCGAATATTCTG
GACCTCACCCTAGGCGACTTGGATCCTGCTTCTGGAAATGGACTGCTCCC
GTCTCCCCTTAGTCAACCGATGTCGCATCTCAGGGGGCGATCGGGAAGCA
ACATGAGCAACCGCAGTGCCCAGAGTGCAGCTAGCAGCCAATTCAACGCA
ATTCAACAACAACGTCAGATGAACTACTGGAATTCACCTATATCTATTGA
ACAAGTTGTCAAGCGACTTACGAGTGAAATGAAACAGGCTAAACAGCAAT
CTCAAGAGCTCCGGCAAACCGACGAGTTCTTGACTGCCATAATGAAACCC
GGATATGTGGAGAAGGAGAAAGCGAAGCCTCCACCAGTGGATAACAACGC
TCCCCGTCCAGTAAACGGGCGGCCAAAGATGCCTCGCGTAGATTCTTTCT
CTCGCTTTTCCGACCCTCCAGCTCCTCCACCGCAACAACCATTGCCCGAA
AAGCCCGATGCTCTGCCGCGGAATGGCACAGACGCCCTATCGCCGTTGAA
GCGATCCGAGACAGAAAAGTCTAAGCTTGGCCCCAACTCGCCTGTTACAC
GTGAGAATAGCCAGATCTTGTCCCTCATTGAGGCTCTGTCCTCCGCCAAA
AGGGAGCTCGATAGCCAGGGCGCTCGTGTCAAGGAGCTTGAAGCGTTACT
TATTCAGGAAAGAAATGCTCGCGAATCTGCTGAGGAGAAGGCCCGGAGCC
TGGAAATGAAATCCACTCAATTTGCTCCAGGCCCAACCGCAGATGCCGAA
CCTGAAGACGATAGCACTAAGAAACCGACTGAAATGGAAGAGCCAAAGAC
TATGCCGCCGGATGCCGACATTTCAACCGATTCCGATGCACCCACTTCTG
AAAAGCAGTCTTTGGCAGAAAGCCAAACAGATGTTTTACAACGTCGTCTC
GAGTCAATGATACTGGAGATGGAGGAGATGAAGAAGCAAGTCACGATGTT
CAAAGACCGGGCAGATGTCGCGGAGAATGAGGCTGTCGAGGCGCGGAAGT
CGCTGGCGGAGATGATTGAAACTTTGCGGCAAGAGCGCGCAGAGCGTGCT
CAGGGCAACGCAGTGTCCGGTGCGCAGACAGATGCTCCTGCTTCTGCTGG
TTCTTCATCTGAGCCGCGAGAGTCTGCCGAAGAGACAGGCAGCGTGTGCG
CCGAGCAATCACAGCCCACCACTGCGACGCCGTCAGGTACAAAAGCGGTG
GACAATGCAGATACGACATTTGCGACACAATCACACCGCCATGACGTCTT
GGAGCAATCCAGTCCATTTGCGTCTATGCTTGGAGTGGTGCTTCTAGGCG
TTGGGTTGATGGCTTACCTGAATGGCTGGCAGAAGATGGACAAATGAATG
ACTGCTGTGGCGTCACCACCTAGTGTGCAATCGGGCCCTCACTTGGGATG
GTTCGACTCTGGTAACGGGGGACAAGGTGCTCTGTCTTCAATGGACGCGG
AAGAAGTTTCACGCACATTTTTGCCGCGAAGGACTGTTCAGAGATCGAAT
TCCTCCTCTTCCCTAGCATCTACTTCATCAACCTCGACCGCTATAGTTAC
GCCGCAACCCCCTAATGCGGGACACGTGAACAACGTTGAACACGCTACAT
GGTCAGCAAAGAAGAAACCCTCAAGAAATAACTGGACAAATTCTAAGTCA
GAGCCGGTGGCTGGGCTGAGCAACGCCCGCTCCCAGGCCATGCCGGCCTT
TTCTTCGGGCCCAGGAGCCTCTTCTACTATGACCGCGATCCACCAGCCGT
CTTCCATTGTTCCATCTCAACACATGCTTCAAGCATCACAGCAAAATGGC
GTACGCGCCGCAAGCGCACCAGCAGGCGACCCCCCCGCCATCCTTACACT
CCTACCCATCAACGGTACCTTCGACAAGAAGCAGATAAACGTACCGTTTT
ATCCGGATCTACTACGCATAGGTCGCCAGACAAATGCCAAGACCGTGCCA
ACACCGGTGAACGGCTACTTCGATTCCAAGGTGCTGTCTCGGCAGCACGC
CGAAATCTGGGCAGACAAAAGCGGAAAGATCTGGATCAGGGATGTTAAGT
CCTCAAATGGTACATTCGTTAATGGGCAGCGGCTGTCTCCAGAGAACCGC
GAATCAGAGCCCCATGAGCTTCGCGAGAACGATACTTTAGAGCTGGGAAT
TGATATCGTCAGCGAGGACCAGAAAACGGTTGTCCATCATAAGGTTTCCG
CCAAGGTTGAGCATGCCGGCGTATACAGCAGCATTCCGAATATTCTGGAC
CTCACCCTAGGCGACTTGGATCCTGCTTCTGGAAATGGACTGCTCCCGTC
TCCCCTTAGTCAACCGATGTCGCATCTCAGGGGGCGATCGGGAAGCAACA
TGAGCAACCGCAGTGCCCAGAGTGCAGCTAGCAGCCAATTCAACGCAATT
CAACAACAACGTCAGATGAACTACTGGAATTCACCTATATCTATTGAACA
AGTTGTCAAGCGACTTACGAGTGAAATGAAACAGGCTAAACAGCAATCTC
AAGAGCTCCGGCAAACCGACGAGTTCTTGACTGCCATAATGAAACCCGGA
TATGTGGAGAAGGAGAAAGCGAAGCCTCCACCAGTGGATAACAACGCTCC
CCGTCCAGTAAACGGGCGGCCAAAGATGCCTCGCGTAGATTCTTTCTCTC
GCTTTTCCGACCCTCCAGCTCCTCCACCGCAACAACCATTGCCCGAAAAG
CCCGATGCTCTGCCGCGGAATGGCACAGACGCCCTATCGCCGTTGAAGCG
ATCCGAGACAGAAAAGTCTAAGCTTGGCCCCAACTCGCCTGTTACACGTG
AGAATAGCCAGATCTTGTCCCTCATTGAGGCTCTGTCCTCCGCCAAAAGG
GAGCTCGATAGCCAGGGCGCTCGTGTCAAGGAGCTTGAAGCGTTACTTAT
TCAGGAAAGAAATGCTCGCGAATCTGCTGAGGAGAAGGCCCGGAGCCTGG
AAATGAAATCCACTCAATTTGCTCCAGGCCCAACCGCAGATGCCGAACCT
GAAGACGATAGCACTAAGAAACCGACTGAAATGGAAGAGCCAAAGACTAT
GCCGCCGGATGCCGACATTTCAACCGATTCCGATGCACCCACTTCTGAAA
AGCAGTCTTTGGCAGAAAGCCAAACAGATGTTTTACAACGTCGTCTCGAG
TCAATGATACTGGAGATGGAGGAGATGAAGAAGCAAGTCACGATGTTCAA
AGACCGGGCAGATGTCGCGGAGAATGAGGCTGTCGAGGCGCGGAAGTCGC
TGGCGGAGATGATTGAAACTTTGCGGCAAGAGCGCGCAGAGCGTGCTCAG
GGCAACGCAGTGTCCGGTGCGCAGACAGATGCTCCTGCTTCTGCTGGTTC
TTCATCTGAGCCGCGAGAGTCTGCCGAAGAGACAGGCAGCGTGTGCGCCG
AGCAATCACAGCCCACCACTGCGACGCCGTCAGGTACAAAAGCGGTGGAC
AATGCAGATACGACATTTGCGACACAATCACACCGCCATGACGTCTTGGA
GCAATCCAGTCCATTTGCGTCTATGCTTGGAGTGGTGCTTCTAGGCGTTG
GGTTGATGGCTTACCTGAATGGCTGGCAGAAGATGGACAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005033-T1.utr5p1 | KJC3_005033-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005033-T1.utr3p1 | KJC3_005033-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008984 |
| DBxref | InterPro:IPR000253 |
| DBxref | PFAM:PF00498 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1403465..1406944 + |
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