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KJC3_005055-T1, KJC3_005055-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005055-T1
Unique NameKJC3_005055-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1461137..1461605+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005055-T1 ID=KJC3_005055-T1|Name=KJC3_005055-T1|organism=Aspergillus niger KJC3|type=mRNA|length=469bp|location=Sequence derived from alignment at ch4:1461137..1461605+ (Aspergillus niger KJC3)
ATGTCGCAGTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCC
CCGTGTTGTCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGC
CGGAACGGTAATTTCAACCTACCTGCTGAAGGTCGAGCCGAACAGCTACT
AATAGATTTATTCTGATATATAGCCAAGCTCTTCGCTACGTGATCCACAA
CACTTCCCTCCCCCAGCGTGTGCGCGCCCAGGCCCAGCTCCAGCTCGCTT
CCATGCACGCCTACACTCGCTCGACGCAGATCAAGAACCGCTGTGTGGCG
GGTGGTGTTCCTCGCAGTGTTATCCGGGCGTTTAGACTTGGTAGAGTAAG
TTTATCCCTAGGGAGGGGTCTTTGGTTGGATAGACACTAATAGTTGGTTT
GTGCAGTACCAATTCCGTCAGCAGGCGCTGGCTGGTGAACTCCCCGGTGT
GAAGAAGGCCAGTTGGTAA
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Coding sequence (CDS) from alignment at ch4:1461137..1461605+

>KJC3_005055-T1 ID=KJC3_005055-T1|Name=KJC3_005055-T1|organism=Aspergillus niger KJC3|type=CDS|length=1026bp|location=Sequence derived from alignment at ch4:1461137..1461605+ (Aspergillus niger KJC3)
ATGTCGCAGTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCC
CCGTGTTGTCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGC
CGGAACGCCAAGCTCTTCGCTACGTGATCCACAACACTTCCCTCCCCCAG
CGTGTGCGCGCCCAGGCCCAGCTCCAGCTCGCTTCCATGCACGCCTACAC
TCGCTCGACGCAGATCAAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCA
GTGTTATCCGGGCGTTTAGACTTGGTAGATACCAATTCCGTCAGCAGGCG
CTGGCTGGTGAACTCCCCGGTGTGAAGAAGGCCAGTTGGTAAATGTCGCA
GTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCCCCGTGTTG
TCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGCCGGAACGC
CAAGCTCTTCGCTACGTGATCCACAACACTTCCCTCCCCCAGCGTGTGCG
CGCCCAGGCCCAGCTCCAGCTCGCTTCCATGCACGCCTACACTCGCTCGA
CGCAGATCAAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCAGTGTTATC
CGGGCGTTTAGACTTGGTAGATACCAATTCCGTCAGCAGGCGCTGGCTGG
TGAACTCCCCGGTGTGAAGAAGGCCAGTTGGTAAATGTCGCAGTTCCGGT
CCAAGATCCTCGACCTCGGCGGGTTCATCAACCCCCGTGTTGTCCGCGAC
CACACCAAGCGGAAGGTTTTCGAGCAATTCGAGCCGGAACGCCAAGCTCT
TCGCTACGTGATCCACAACACTTCCCTCCCCCAGCGTGTGCGCGCCCAGG
CCCAGCTCCAGCTCGCTTCCATGCACGCCTACACTCGCTCGACGCAGATC
AAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCAGTGTTATCCGGGCGTT
TAGACTTGGTAGATACCAATTCCGTCAGCAGGCGCTGGCTGGTGAACTCC
CCGGTGTGAAGAAGGCCAGTTGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005055KJC3_005055Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005055-T1.exon1KJC3_005055-T1.exon1Aspergillus niger KJC3exon
KJC3_005055-T1.exon2KJC3_005055-T1.exon2Aspergillus niger KJC3exon
KJC3_005055-T1.exon3KJC3_005055-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005055-T1.cdsKJC3_005055-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005055-T1KJC3_005055-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265D7J
DBxrefInterPro:IPR043140
DBxrefInterPro:IPR001209
DBxrefPFAM:PF00253
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1461137..1461605 +
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