You are here

Home

KJC3_005066-T1, KJC3_005066-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005066-T1
Unique NameKJC3_005066-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1490505..1492114-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005066-T1 ID=KJC3_005066-T1|Name=KJC3_005066-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1610bp|location=Sequence derived from alignment at ch4:1490505..1492114- (Aspergillus niger KJC3)
ATGCAAAGCTCGCCCCGGGTCAAATATAATCTGCTGAGCTTTGGTAAGTA
GAATGAAGCATTACATGGCCAAGTCAATCACTAATACAGAAATAGATGGG
GGCGGGATGCGTGGGTACGGAAGCATGCTCATACTCGAGAGGCTAATGAG
CTACGTTAAGGATATTGAGGGGGATGCAAACTGTCTAGCTGATCTACTTA
AAGACGTACCTGACGCTAATTGCGATCCCGCTGAATCTAGCTTCCATCCA
CATGATTGTCCGGCAGGGATTGAAGGGTCAGTCATGAATGAAGAGGTTAA
CAAATTCCTGCCCTGTCATTATTTTGACTGCATCATCGGTACGAGCACAG
GTGGGTAAGTCACGAAATTATGGATTCCCCGTTTTATGGCACATACTGAT
TTTGATCCCACTAGACTAATCGCTATGATGCTGGGGAGGCTTCGTATGAC
GGTGACCCATGCTAGGCAGCAATATCAGTTACTTGGTCAACAAGTATTTG
GCTCGCCTCGGAGTTTCCCTTATTTGAGCTTTCGACCATTGGCCATAATC
AAATACAATCACGAAGGGCTGGTCAAGGCTGTTAAAGATATTATTAAGCG
TCACGATTCCATCCAACAGGGGCCATATGGATTTCCAAATGCGTCTTTTA
ATAAAACAGACTATGGGGTCTGTAGCACGTGCGCTTACCTGATATCCTCA
ATCCATAATGTCTGCTTCTAACTGTCGAGAAAGTGTTGTGACAGCTCTTG
GAAAGGTCTACGATTCTCAGTGGTCACCCATCAGAACAAACGAAAACGAA
GAAATGAATGAGGTGAATTATCGTTTCCAGACATATGATACCCCAGAGAA
AACCAATTCTGGAGATCCAAATCTCGGAACAGCTTTCACGGGCCCATTGT
GGTGGGTCGCACGGGCTTGCACTGCAGCACCGACTTATTTTATTCCCAAA
GAAATCGAGGCGCTTAATGGTAACATTTGGCGCTTCAAAGATGCTGGCTT
GGTTCTTCAAAACCCAACTCAAGAGGGCGTTGATGAGGTCCTACGCTGGG
GTCCCCCATCTGAAACGTATGCTCAATGTTTCAATACTATCGTTAGTATT
GGGGCTGGATTGCAGCGTCCGCCAAAGAATTTCGGGCCCGGACGAGCCCC
CGGGGGGGGTTGGCTTGACACCTTAGCAGTGATCAAGGCGGGGTTCAAAT
TTGACAACCCTGAGGCCGTACACAAGAATATGAGTCGAACTTTAGGGGTT
AACGGAATATACTGGCGGTTTAACAGCGATTCGCATGAGTGGGGAAATAT
AAAGTTGGACCAATATGACGAAGGCACGATGACGAAGATGAGAACACTTG
CTAATACATATCTCGCAAGAGAGGATGTGAAACATGACCTCCAAGAGTGT
GCAAAGTCTCTCGTGAAACATCGACGCCAGAGACTGAAGCAACAAGATGC
ATGGGAAAGGTTTGCTCTTGCAGTTGAATATCGCTGCGCAGCACCCGGGT
GTTTCAATCACTACAACCTCAAAGAAGATATGGAAAACCATATGAGACGA
TGCCACAGAGGCAATCAAGAGAAAGCGAAAAGACTGATCTGGCGCTATGA
CCGGAGTTAA
back to top

Coding sequence (CDS) from alignment at ch4:1490505..1492114-

>KJC3_005066-T1 ID=KJC3_005066-T1|Name=KJC3_005066-T1|organism=Aspergillus niger KJC3|type=CDS|length=5772bp|location=Sequence derived from alignment at ch4:1490505..1492114- (Aspergillus niger KJC3)
TGTTGTGACAGCTCTTGGAAAGGTCTACGATTCTCAGTGGTCACCCATCA
GAACAAACGAAAACGAAGAAATGAATGAGGTGAATTATCGTTTCCAGACA
TATGATACCCCAGAGAAAACCAATTCTGGAGATCCAAATCTCGGAACAGC
TTTCACGGGCCCATTGTGGTGGGTCGCACGGGCTTGCACTGCAGCACCGA
CTTATTTTATTCCCAAAGAAATCGAGGCGCTTAATGGTAACATTTGGCGC
TTCAAAGATGCTGGCTTGGTTCTTCAAAACCCAACTCAAGAGGGCGTTGA
TGAGGTCCTACGCTGGGGTCCCCCATCTGAAACGTATGCTCAATGTTTCA
ATACTATCGTTAGTATTGGGGCTGGATTGCAGCGTCCGCCAAAGAATTTC
GGGCCCGGACGAGCCCCCGGGGGGGGTTGGCTTGACACCTTAGCAGTGAT
CAAGGCGGGGTTCAAATTTGACAACCCTGAGGCCGTACACAAGAATATGA
GTCGAACTTTAGGGGTTAACGGAATATACTGGCGGTTTAACAGCGATTCG
CATGAGTGGGGAAATATAAAGTTGGACCAATATGACGAAGGCACGATGAC
GAAGATGAGAACACTTGCTAATACATATCTCGCAAGAGAGGATGTGAAAC
ATGACCTCCAAGAGTGTGCAAAGTCTCTCGTGAAACATCGACGCCAGAGA
CTGAAGCAACAAGATGCATGGGAAAGGTTTGCTCTTGCAGTTGAATATCG
CTGCGCAGCACCCGGGTGTTTCAATCACTACAACCTCAAAGAAGATATGG
AAAACCATATGAGACGATGCCACAGAGGCAATCAAGAGAAAGCGAAAAGA
CTGATCTGGCGCTATGACCGGAGTTAAACTAATCGCTATGATGCTGGGGA
GGCTTCGTATGACGGTGACCCATGCTAGGCAGCAATATCAGTTACTTGGT
CAACAAGTATTTGGCTCGCCTCGGAGTTTCCCTTATTTGAGCTTTCGACC
ATTGGCCATAATCAAATACAATCACGAAGGGCTGGTCAAGGCTGTTAAAG
ATATTATTAAGCGTCACGATTCCATCCAACAGGGGCCATATGGATTTCCA
AATGCGTCTTTTAATAAAACAGACTATGGGGTCTGTAGCACATGGGGGCG
GGATGCGTGGGTACGGAAGCATGCTCATACTCGAGAGGCTAATGAGCTAC
GTTAAGGATATTGAGGGGGATGCAAACTGTCTAGCTGATCTACTTAAAGA
CGTACCTGACGCTAATTGCGATCCCGCTGAATCTAGCTTCCATCCACATG
ATTGTCCGGCAGGGATTGAAGGGTCAGTCATGAATGAAGAGGTTAACAAA
TTCCTGCCCTGTCATTATTTTGACTGCATCATCGGTACGAGCACAGGTGG
ATGCAAAGCTCGCCCCGGGTCAAATATAATCTGCTGAGCTTTGTGTTGTG
ACAGCTCTTGGAAAGGTCTACGATTCTCAGTGGTCACCCATCAGAACAAA
CGAAAACGAAGAAATGAATGAGGTGAATTATCGTTTCCAGACATATGATA
CCCCAGAGAAAACCAATTCTGGAGATCCAAATCTCGGAACAGCTTTCACG
GGCCCATTGTGGTGGGTCGCACGGGCTTGCACTGCAGCACCGACTTATTT
TATTCCCAAAGAAATCGAGGCGCTTAATGGTAACATTTGGCGCTTCAAAG
ATGCTGGCTTGGTTCTTCAAAACCCAACTCAAGAGGGCGTTGATGAGGTC
CTACGCTGGGGTCCCCCATCTGAAACGTATGCTCAATGTTTCAATACTAT
CGTTAGTATTGGGGCTGGATTGCAGCGTCCGCCAAAGAATTTCGGGCCCG
GACGAGCCCCCGGGGGGGGTTGGCTTGACACCTTAGCAGTGATCAAGGCG
GGGTTCAAATTTGACAACCCTGAGGCCGTACACAAGAATATGAGTCGAAC
TTTAGGGGTTAACGGAATATACTGGCGGTTTAACAGCGATTCGCATGAGT
GGGGAAATATAAAGTTGGACCAATATGACGAAGGCACGATGACGAAGATG
AGAACACTTGCTAATACATATCTCGCAAGAGAGGATGTGAAACATGACCT
CCAAGAGTGTGCAAAGTCTCTCGTGAAACATCGACGCCAGAGACTGAAGC
AACAAGATGCATGGGAAAGGTTTGCTCTTGCAGTTGAATATCGCTGCGCA
GCACCCGGGTGTTTCAATCACTACAACCTCAAAGAAGATATGGAAAACCA
TATGAGACGATGCCACAGAGGCAATCAAGAGAAAGCGAAAAGACTGATCT
GGCGCTATGACCGGAGTTAAACTAATCGCTATGATGCTGGGGAGGCTTCG
TATGACGGTGACCCATGCTAGGCAGCAATATCAGTTACTTGGTCAACAAG
TATTTGGCTCGCCTCGGAGTTTCCCTTATTTGAGCTTTCGACCATTGGCC
ATAATCAAATACAATCACGAAGGGCTGGTCAAGGCTGTTAAAGATATTAT
TAAGCGTCACGATTCCATCCAACAGGGGCCATATGGATTTCCAAATGCGT
CTTTTAATAAAACAGACTATGGGGTCTGTAGCACATGGGGGCGGGATGCG
TGGGTACGGAAGCATGCTCATACTCGAGAGGCTAATGAGCTACGTTAAGG
ATATTGAGGGGGATGCAAACTGTCTAGCTGATCTACTTAAAGACGTACCT
GACGCTAATTGCGATCCCGCTGAATCTAGCTTCCATCCACATGATTGTCC
GGCAGGGATTGAAGGGTCAGTCATGAATGAAGAGGTTAACAAATTCCTGC
CCTGTCATTATTTTGACTGCATCATCGGTACGAGCACAGGTGGATGCAAA
GCTCGCCCCGGGTCAAATATAATCTGCTGAGCTTTGTGTTGTGACAGCTC
TTGGAAAGGTCTACGATTCTCAGTGGTCACCCATCAGAACAAACGAAAAC
GAAGAAATGAATGAGGTGAATTATCGTTTCCAGACATATGATACCCCAGA
GAAAACCAATTCTGGAGATCCAAATCTCGGAACAGCTTTCACGGGCCCAT
TGTGGTGGGTCGCACGGGCTTGCACTGCAGCACCGACTTATTTTATTCCC
AAAGAAATCGAGGCGCTTAATGGTAACATTTGGCGCTTCAAAGATGCTGG
CTTGGTTCTTCAAAACCCAACTCAAGAGGGCGTTGATGAGGTCCTACGCT
GGGGTCCCCCATCTGAAACGTATGCTCAATGTTTCAATACTATCGTTAGT
ATTGGGGCTGGATTGCAGCGTCCGCCAAAGAATTTCGGGCCCGGACGAGC
CCCCGGGGGGGGTTGGCTTGACACCTTAGCAGTGATCAAGGCGGGGTTCA
AATTTGACAACCCTGAGGCCGTACACAAGAATATGAGTCGAACTTTAGGG
GTTAACGGAATATACTGGCGGTTTAACAGCGATTCGCATGAGTGGGGAAA
TATAAAGTTGGACCAATATGACGAAGGCACGATGACGAAGATGAGAACAC
TTGCTAATACATATCTCGCAAGAGAGGATGTGAAACATGACCTCCAAGAG
TGTGCAAAGTCTCTCGTGAAACATCGACGCCAGAGACTGAAGCAACAAGA
TGCATGGGAAAGGTTTGCTCTTGCAGTTGAATATCGCTGCGCAGCACCCG
GGTGTTTCAATCACTACAACCTCAAAGAAGATATGGAAAACCATATGAGA
CGATGCCACAGAGGCAATCAAGAGAAAGCGAAAAGACTGATCTGGCGCTA
TGACCGGAGTTAAACTAATCGCTATGATGCTGGGGAGGCTTCGTATGACG
GTGACCCATGCTAGGCAGCAATATCAGTTACTTGGTCAACAAGTATTTGG
CTCGCCTCGGAGTTTCCCTTATTTGAGCTTTCGACCATTGGCCATAATCA
AATACAATCACGAAGGGCTGGTCAAGGCTGTTAAAGATATTATTAAGCGT
CACGATTCCATCCAACAGGGGCCATATGGATTTCCAAATGCGTCTTTTAA
TAAAACAGACTATGGGGTCTGTAGCACATGGGGGCGGGATGCGTGGGTAC
GGAAGCATGCTCATACTCGAGAGGCTAATGAGCTACGTTAAGGATATTGA
GGGGGATGCAAACTGTCTAGCTGATCTACTTAAAGACGTACCTGACGCTA
ATTGCGATCCCGCTGAATCTAGCTTCCATCCACATGATTGTCCGGCAGGG
ATTGAAGGGTCAGTCATGAATGAAGAGGTTAACAAATTCCTGCCCTGTCA
TTATTTTGACTGCATCATCGGTACGAGCACAGGTGGATGCAAAGCTCGCC
CCGGGTCAAATATAATCTGCTGAGCTTTGTGTTGTGACAGCTCTTGGAAA
GGTCTACGATTCTCAGTGGTCACCCATCAGAACAAACGAAAACGAAGAAA
TGAATGAGGTGAATTATCGTTTCCAGACATATGATACCCCAGAGAAAACC
AATTCTGGAGATCCAAATCTCGGAACAGCTTTCACGGGCCCATTGTGGTG
GGTCGCACGGGCTTGCACTGCAGCACCGACTTATTTTATTCCCAAAGAAA
TCGAGGCGCTTAATGGTAACATTTGGCGCTTCAAAGATGCTGGCTTGGTT
CTTCAAAACCCAACTCAAGAGGGCGTTGATGAGGTCCTACGCTGGGGTCC
CCCATCTGAAACGTATGCTCAATGTTTCAATACTATCGTTAGTATTGGGG
CTGGATTGCAGCGTCCGCCAAAGAATTTCGGGCCCGGACGAGCCCCCGGG
GGGGGTTGGCTTGACACCTTAGCAGTGATCAAGGCGGGGTTCAAATTTGA
CAACCCTGAGGCCGTACACAAGAATATGAGTCGAACTTTAGGGGTTAACG
GAATATACTGGCGGTTTAACAGCGATTCGCATGAGTGGGGAAATATAAAG
TTGGACCAATATGACGAAGGCACGATGACGAAGATGAGAACACTTGCTAA
TACATATCTCGCAAGAGAGGATGTGAAACATGACCTCCAAGAGTGTGCAA
AGTCTCTCGTGAAACATCGACGCCAGAGACTGAAGCAACAAGATGCATGG
GAAAGGTTTGCTCTTGCAGTTGAATATCGCTGCGCAGCACCCGGGTGTTT
CAATCACTACAACCTCAAAGAAGATATGGAAAACCATATGAGACGATGCC
ACAGAGGCAATCAAGAGAAAGCGAAAAGACTGATCTGGCGCTATGACCGG
AGTTAAACTAATCGCTATGATGCTGGGGAGGCTTCGTATGACGGTGACCC
ATGCTAGGCAGCAATATCAGTTACTTGGTCAACAAGTATTTGGCTCGCCT
CGGAGTTTCCCTTATTTGAGCTTTCGACCATTGGCCATAATCAAATACAA
TCACGAAGGGCTGGTCAAGGCTGTTAAAGATATTATTAAGCGTCACGATT
CCATCCAACAGGGGCCATATGGATTTCCAAATGCGTCTTTTAATAAAACA
GACTATGGGGTCTGTAGCACATGGGGGCGGGATGCGTGGGTACGGAAGCA
TGCTCATACTCGAGAGGCTAATGAGCTACGTTAAGGATATTGAGGGGGAT
GCAAACTGTCTAGCTGATCTACTTAAAGACGTACCTGACGCTAATTGCGA
TCCCGCTGAATCTAGCTTCCATCCACATGATTGTCCGGCAGGGATTGAAG
GGTCAGTCATGAATGAAGAGGTTAACAAATTCCTGCCCTGTCATTATTTT
GACTGCATCATCGGTACGAGCACAGGTGGATGCAAAGCTCGCCCCGGGTC
AAATATAATCTGCTGAGCTTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005066KJC3_005066Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005066-T1KJC3_005066-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005066-T1.cdsKJC3_005066-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005066-T1.exon4KJC3_005066-T1.exon4Aspergillus niger KJC3exon
KJC3_005066-T1.exon3KJC3_005066-T1.exon3Aspergillus niger KJC3exon
KJC3_005066-T1.exon2KJC3_005066-T1.exon2Aspergillus niger KJC3exon
KJC3_005066-T1.exon1KJC3_005066-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR016035
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR002641
DBxrefPFAM:PF01734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1490505..1492114 -
Powered by Drupal