You are here

Home

KJC3_005072-T2, KJC3_005072-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005072-T2
Unique NameKJC3_005072-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1506904..1509853+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005072-T2 ID=KJC3_005072-T2|Name=KJC3_005072-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2950bp|location=Sequence derived from alignment at ch4:1506904..1509853+ (Aspergillus niger KJC3)
CCCATTCATTCCCCGTTCCATCATCATCATCATCATCACCATCACTGACT
ACTATTACTACTTACTACCTTCAATCAGCAGCTTGCTTTCTTCCCTTCTT
ATTTTTTAGTCTTGTCTTCATTTCTTCCCCTCCTTTAATTCTCTTCCCAC
CGTCGCTTCTGCATTTCTCCCTCTAAACTCTTGCTCTCCTCCCCCTTCTC
CTCCCCCCCAAAACCAAGCTCTGATCCGCGAGTCCCTCCCCCCCCTCCAC
CGTCCGTCCTCTTCCCCCCCCCCCCAGTCCAGTTGTCAGCGTCGTATGAT
CCAACATGGCCGCCAACCCAGGAGAGGTATAGTCAACTCCCGGTGTGCGC
GGCTACACCACGCTTCTATCTAGATCGATAGGGGCAGAAAAGTAGTGTGG
ATGTTCTGACTCGGTCCGGCTGGTCCTTTCTGACAGGATTCCCTCTCTCC
GCTGATCCAAAAATGGCTTGAGTGGGACCAGGTAAGTCCCCTGCATTTGT
CAGATTCCTTTCCGCCCAGCTCAGCTTTAACTCCCCCCCCATAGTAGTGG
TGGTGATGGAGGTATTGCTGCTACTCAATGCTCTTACTTACTTCCCCACA
CACAACCTCCCAAATGTCTAGCTGCTAATGCCCAACCCCATTAGGATCCC
TCTACTCGCGGGGAAATTGAGCGGCTGCGCGATGCGGGAGAGCTGACGGA
GCTGCAGCAGCGCCTGCAAAAGAGTACGTGTGGGCTCGAGACATGCTTCA
TCTGATCTTCTCGTACCGAATCTAGGCTCTTTACGCTCCCCTGCCTGTCA
TGTCTAATCCGCAAAAACTGCAGGAATTCAATTTGGCACCGCTGGTCTCC
GGGGTCGCATGGCAGCGGGCTTCTCTTGCATGAATTGTTTGACTGTCATT
CAGGCATCGCAGGGTCTGGCGATGTACTTGAAGAAGCACCATGGTGATAT
TGCCTCCTATGGCGTCGTTATTGGCCATGATGCTCGCTACAATTCCGCCA
AGTTCGCCGCTCTGGCCGCAAACGCTTTCATCGCACAGAGGATCCCGGTC
TGGTTCTACTCCGAGCCTTCTGTTACGCCGACGGTGCCTTTCGGTGTAAC
CCAACTGCATGCTGCTGCAGGCATCATGGTTACGGCAAGCCATGTAAGGC
ATCCCTGTCCGCCATTCGAAGATCATGTGGCTAATCCTGCCCTAGAATCC
AGCACAAGATAATGGTAGGTTGCCATGGCTTGCTCCTCGACAGCCGGACC
GTATCGCTGACGGACGTGGTGAACAGGTTACAAAGTGTCTGGTTGCGCTC
ATCCAGCCTGTTTTGATTATCACTAACATGCTCCAGCTATTTTAAAAATG
GCGCCCAGATCAATACCCCCATGGATGTGGAGATAGCTCGATCTATCGAG
GAGAATCTGACGCCCTGGCCCAACGCTTGGAAAGACTTGCAGCCCGGTGA
ATACTTGCGCCCCAAGGCGTACGACAATCTTCTGCCACACTACAACACAG
CAGTGTGGCAATACGCTGTGAGTCTCTATGCATTGTGCTTTTGTAACACG
GGCTCATCGCTTTGCAGACATACACGGTCCGGGAATGGAAGCAGCCACAG
CCATTTGTGTATACTCCTCTGCATGGTGTAGGAGGCCTGGTATTCCCCAG
CTTGTGCCGTTCCGTTGGTATCAAAGATTTCACTGTCGTCCCAGAACAAG
AAGAACCGAACCCCGACTTTCCCACGGTAGCTTTTCCTAATCCCGAAGAG
GTTGGGGCATTGGATCTCGCGATGCGCACCGCGGACCGGGAGGGTAGAGA
AGTGATTATTGCACATGATCCGGATGCAGATCGCTTCGCGGCTGCTGAGA
AGGTCAAGTATGTATCCGTTGCCTTACACACCAGAGGACCCCGCTAACCC
ATCGCAGTGGATCGTGGTTCTCCTTCACCGGAAACCATTTGGGAGTACTG
CTTGCATCGCACCTGTTTGATTCTTTGGAGACTATCGACAGCGACACACG
AATTGCCGTGCTGAACTCGACCGTCTCTACGTGCATGTTGGAGAAAATGG
CAAAGGCCAAGGGGATGCATTACGAAGAAGCGTTGACCGGGTTTAAGTGG
ATGGGCAACATCGCGCGGAGACTCGAGGAACTCGGCTACTATGTTCCATT
CGCCTTTGAAGAAGCGCTTGGGTACATGTTTCCGGAAGTGTGCTACGACA
AGGACGGTATTTCCGCCGCTATGGTGTTCTTGCTAGCCCAAGCCAAATGG
AATGCTCAAGGGCTCACCCCCTATACGAAGCTCCAACAACTCTTCAAGGA
ACATGGGCACCACGAAACTCTCAACACCTACGTCCGTTCGACGAACCCAG
ATCTTACCATGGACCTCTTCCGAAAAATCAGGTCCGGACCGTTCGGCGCC
GGCAAGTCCTTTGGCTCCTTCAACATCCAGCGATGGCGAGACCTGACGGA
GGGTTACGATTCTGGAACCGAGGACCACACGCCCACACTCCCGGTTGACA
AGAACACCCAGATGCTGACACTATGGATGGATCGGGAAGTCAGATTCACC
ATTCGTGCGTCGGGCACAGAACCTAAAGTCAAAAGTATGTTTGGACATCA
ACAGAGCCATGGCGCAGTGCTAATTGTCATTTTAGTCTATATTGAAAGCA
GCGGAGCGTCGCAAGACCAAGCCGTCGAGGCTGTCCGTGACACATTCCTG
ACCGTTATCAAAGAATGGGTCCAGCCTTTTGCTCCAGGCATGACTTACAA
TGAGCAACAGGTTACTTCCTCGGGCACTAAGTTCCAGGTGAAATAAGTAG
CCAGTAAGAGTGATGAGGTGCTTGGGTGATATCTTTTCTTATGTTCATGA
ATGACTATAGAACACAGCTGGGGGAGGTTGACCCCGCCCCTGTGTTGCCA
CTTCAGCAGCAAGACTAGCATGAATACGACGCAATGAATCTCTACCGTGA
back to top

Coding sequence (CDS) from alignment at ch4:1506904..1509853+

>KJC3_005072-T2 ID=KJC3_005072-T2|Name=KJC3_005072-T2|organism=Aspergillus niger KJC3|type=CDS|length=5100bp|location=Sequence derived from alignment at ch4:1506904..1509853+ (Aspergillus niger KJC3)
ATGGATGTGGAGATAGCTCGATCTATCGAGGAGAATCTGACGCCCTGGCC
CAACGCTTGGAAAGACTTGCAGCCCGGTGAATACTTGCGCCCCAAGGCGT
ACGACAATCTTCTGCCACACTACAACACAGCAGTGTGGCAATACGCTACA
TACACGGTCCGGGAATGGAAGCAGCCACAGCCATTTGTGTATACTCCTCT
GCATGGTGTAGGAGGCCTGGTATTCCCCAGCTTGTGCCGTTCCGTTGGTA
TCAAAGATTTCACTGTCGTCCCAGAACAAGAAGAACCGAACCCCGACTTT
CCCACGGTAGCTTTTCCTAATCCCGAAGAGGTTGGGGCATTGGATCTCGC
GATGCGCACCGCGGACCGGGAGGGTAGAGAAGTGATTATTGCACATGATC
CGGATGCAGATCGCTTCGCGGCTGCTGAGAAGGTCAATGGATCGTGGTTC
TCCTTCACCGGAAACCATTTGGGAGTACTGCTTGCATCGCACCTGTTTGA
TTCTTTGGAGACTATCGACAGCGACACACGAATTGCCGTGCTGAACTCGA
CCGTCTCTACGTGCATGTTGGAGAAAATGGCAAAGGCCAAGGGGATGCAT
TACGAAGAAGCGTTGACCGGGTTTAAGTGGATGGGCAACATCGCGCGGAG
ACTCGAGGAACTCGGCTACTATGTTCCATTCGCCTTTGAAGAAGCGCTTG
GGTACATGTTTCCGGAAGTGTGCTACGACAAGGACGGTATTTCCGCCGCT
ATGGTGTTCTTGCTAGCCCAAGCCAAATGGAATGCTCAAGGGCTCACCCC
CTATACGAAGCTCCAACAACTCTTCAAGGAACATGGGCACCACGAAACTC
TCAACACCTACGTCCGTTCGACGAACCCAGATCTTACCATGGACCTCTTC
CGAAAAATCAGGTCCGGACCGTTCGGCGCCGGCAAGTCCTTTGGCTCCTT
CAACATCCAGCGATGGCGAGACCTGACGGAGGGTTACGATTCTGGAACCG
AGGACCACACGCCCACACTCCCGGTTGACAAGAACACCCAGATGCTGACA
CTATGGATGGATCGGGAAGTCAGATTCACCATTCGTGCGTCGGGCACAGA
ACCTAAAGTCAAAATCTATATTGAAAGCAGCGGAGCGTCGCAAGACCAAG
CCGTCGAGGCTGTCCGTGACACATTCCTGACCGTTATCAAAGAATGGGTC
CAGCCTTTTGCTCCAGGCATGACTTACAATGAGCAACAGGTTACTTCCTC
GGGCACTAAGTTCCAGGTGAAATAAATGGATGTGGAGATAGCTCGATCTA
TCGAGGAGAATCTGACGCCCTGGCCCAACGCTTGGAAAGACTTGCAGCCC
GGTGAATACTTGCGCCCCAAGGCGTACGACAATCTTCTGCCACACTACAA
CACAGCAGTGTGGCAATACGCTACATACACGGTCCGGGAATGGAAGCAGC
CACAGCCATTTGTGTATACTCCTCTGCATGGTGTAGGAGGCCTGGTATTC
CCCAGCTTGTGCCGTTCCGTTGGTATCAAAGATTTCACTGTCGTCCCAGA
ACAAGAAGAACCGAACCCCGACTTTCCCACGGTAGCTTTTCCTAATCCCG
AAGAGGTTGGGGCATTGGATCTCGCGATGCGCACCGCGGACCGGGAGGGT
AGAGAAGTGATTATTGCACATGATCCGGATGCAGATCGCTTCGCGGCTGC
TGAGAAGGTCAATGGATCGTGGTTCTCCTTCACCGGAAACCATTTGGGAG
TACTGCTTGCATCGCACCTGTTTGATTCTTTGGAGACTATCGACAGCGAC
ACACGAATTGCCGTGCTGAACTCGACCGTCTCTACGTGCATGTTGGAGAA
AATGGCAAAGGCCAAGGGGATGCATTACGAAGAAGCGTTGACCGGGTTTA
AGTGGATGGGCAACATCGCGCGGAGACTCGAGGAACTCGGCTACTATGTT
CCATTCGCCTTTGAAGAAGCGCTTGGGTACATGTTTCCGGAAGTGTGCTA
CGACAAGGACGGTATTTCCGCCGCTATGGTGTTCTTGCTAGCCCAAGCCA
AATGGAATGCTCAAGGGCTCACCCCCTATACGAAGCTCCAACAACTCTTC
AAGGAACATGGGCACCACGAAACTCTCAACACCTACGTCCGTTCGACGAA
CCCAGATCTTACCATGGACCTCTTCCGAAAAATCAGGTCCGGACCGTTCG
GCGCCGGCAAGTCCTTTGGCTCCTTCAACATCCAGCGATGGCGAGACCTG
ACGGAGGGTTACGATTCTGGAACCGAGGACCACACGCCCACACTCCCGGT
TGACAAGAACACCCAGATGCTGACACTATGGATGGATCGGGAAGTCAGAT
TCACCATTCGTGCGTCGGGCACAGAACCTAAAGTCAAAATCTATATTGAA
AGCAGCGGAGCGTCGCAAGACCAAGCCGTCGAGGCTGTCCGTGACACATT
CCTGACCGTTATCAAAGAATGGGTCCAGCCTTTTGCTCCAGGCATGACTT
ACAATGAGCAACAGGTTACTTCCTCGGGCACTAAGTTCCAGGTGAAATAA
ATGGATGTGGAGATAGCTCGATCTATCGAGGAGAATCTGACGCCCTGGCC
CAACGCTTGGAAAGACTTGCAGCCCGGTGAATACTTGCGCCCCAAGGCGT
ACGACAATCTTCTGCCACACTACAACACAGCAGTGTGGCAATACGCTACA
TACACGGTCCGGGAATGGAAGCAGCCACAGCCATTTGTGTATACTCCTCT
GCATGGTGTAGGAGGCCTGGTATTCCCCAGCTTGTGCCGTTCCGTTGGTA
TCAAAGATTTCACTGTCGTCCCAGAACAAGAAGAACCGAACCCCGACTTT
CCCACGGTAGCTTTTCCTAATCCCGAAGAGGTTGGGGCATTGGATCTCGC
GATGCGCACCGCGGACCGGGAGGGTAGAGAAGTGATTATTGCACATGATC
CGGATGCAGATCGCTTCGCGGCTGCTGAGAAGGTCAATGGATCGTGGTTC
TCCTTCACCGGAAACCATTTGGGAGTACTGCTTGCATCGCACCTGTTTGA
TTCTTTGGAGACTATCGACAGCGACACACGAATTGCCGTGCTGAACTCGA
CCGTCTCTACGTGCATGTTGGAGAAAATGGCAAAGGCCAAGGGGATGCAT
TACGAAGAAGCGTTGACCGGGTTTAAGTGGATGGGCAACATCGCGCGGAG
ACTCGAGGAACTCGGCTACTATGTTCCATTCGCCTTTGAAGAAGCGCTTG
GGTACATGTTTCCGGAAGTGTGCTACGACAAGGACGGTATTTCCGCCGCT
ATGGTGTTCTTGCTAGCCCAAGCCAAATGGAATGCTCAAGGGCTCACCCC
CTATACGAAGCTCCAACAACTCTTCAAGGAACATGGGCACCACGAAACTC
TCAACACCTACGTCCGTTCGACGAACCCAGATCTTACCATGGACCTCTTC
CGAAAAATCAGGTCCGGACCGTTCGGCGCCGGCAAGTCCTTTGGCTCCTT
CAACATCCAGCGATGGCGAGACCTGACGGAGGGTTACGATTCTGGAACCG
AGGACCACACGCCCACACTCCCGGTTGACAAGAACACCCAGATGCTGACA
CTATGGATGGATCGGGAAGTCAGATTCACCATTCGTGCGTCGGGCACAGA
ACCTAAAGTCAAAATCTATATTGAAAGCAGCGGAGCGTCGCAAGACCAAG
CCGTCGAGGCTGTCCGTGACACATTCCTGACCGTTATCAAAGAATGGGTC
CAGCCTTTTGCTCCAGGCATGACTTACAATGAGCAACAGGTTACTTCCTC
GGGCACTAAGTTCCAGGTGAAATAAATGGATGTGGAGATAGCTCGATCTA
TCGAGGAGAATCTGACGCCCTGGCCCAACGCTTGGAAAGACTTGCAGCCC
GGTGAATACTTGCGCCCCAAGGCGTACGACAATCTTCTGCCACACTACAA
CACAGCAGTGTGGCAATACGCTACATACACGGTCCGGGAATGGAAGCAGC
CACAGCCATTTGTGTATACTCCTCTGCATGGTGTAGGAGGCCTGGTATTC
CCCAGCTTGTGCCGTTCCGTTGGTATCAAAGATTTCACTGTCGTCCCAGA
ACAAGAAGAACCGAACCCCGACTTTCCCACGGTAGCTTTTCCTAATCCCG
AAGAGGTTGGGGCATTGGATCTCGCGATGCGCACCGCGGACCGGGAGGGT
AGAGAAGTGATTATTGCACATGATCCGGATGCAGATCGCTTCGCGGCTGC
TGAGAAGGTCAATGGATCGTGGTTCTCCTTCACCGGAAACCATTTGGGAG
TACTGCTTGCATCGCACCTGTTTGATTCTTTGGAGACTATCGACAGCGAC
ACACGAATTGCCGTGCTGAACTCGACCGTCTCTACGTGCATGTTGGAGAA
AATGGCAAAGGCCAAGGGGATGCATTACGAAGAAGCGTTGACCGGGTTTA
AGTGGATGGGCAACATCGCGCGGAGACTCGAGGAACTCGGCTACTATGTT
CCATTCGCCTTTGAAGAAGCGCTTGGGTACATGTTTCCGGAAGTGTGCTA
CGACAAGGACGGTATTTCCGCCGCTATGGTGTTCTTGCTAGCCCAAGCCA
AATGGAATGCTCAAGGGCTCACCCCCTATACGAAGCTCCAACAACTCTTC
AAGGAACATGGGCACCACGAAACTCTCAACACCTACGTCCGTTCGACGAA
CCCAGATCTTACCATGGACCTCTTCCGAAAAATCAGGTCCGGACCGTTCG
GCGCCGGCAAGTCCTTTGGCTCCTTCAACATCCAGCGATGGCGAGACCTG
ACGGAGGGTTACGATTCTGGAACCGAGGACCACACGCCCACACTCCCGGT
TGACAAGAACACCCAGATGCTGACACTATGGATGGATCGGGAAGTCAGAT
TCACCATTCGTGCGTCGGGCACAGAACCTAAAGTCAAAATCTATATTGAA
AGCAGCGGAGCGTCGCAAGACCAAGCCGTCGAGGCTGTCCGTGACACATT
CCTGACCGTTATCAAAGAATGGGTCCAGCCTTTTGCTCCAGGCATGACTT
ACAATGAGCAACAGGTTACTTCCTCGGGCACTAAGTTCCAGGTGAAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016868intramolecular transferase activity, phosphotransferases
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0071704organic substance metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005072KJC3_005072Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005072-T2KJC3_005072-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005072-T2.utr5p1KJC3_005072-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005072-T2.utr5p2KJC3_005072-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005072-T2.utr5p3KJC3_005072-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005072-T2.exon1KJC3_005072-T2.exon1Aspergillus niger KJC3exon
KJC3_005072-T2.exon2KJC3_005072-T2.exon2Aspergillus niger KJC3exon
KJC3_005072-T2.exon3KJC3_005072-T2.exon3Aspergillus niger KJC3exon
KJC3_005072-T2.exon4KJC3_005072-T2.exon4Aspergillus niger KJC3exon
KJC3_005072-T2.exon5KJC3_005072-T2.exon5Aspergillus niger KJC3exon
KJC3_005072-T2.exon6KJC3_005072-T2.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005072-T2.cdsKJC3_005072-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005072-T2.utr3p1KJC3_005072-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016055
DBxrefInterPro:IPR036900
DBxrefInterPro:IPR005845
DBxrefInterPro:IPR005846
DBxrefInterPro:IPR005843
DBxrefPFAM:PF02880
DBxrefPFAM:PF02879
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1506904..1509853 +
Powered by Drupal