|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1516219..1519459- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005078-T1 ID=KJC3_005078-T1|Name=KJC3_005078-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3241bp|location=Sequence derived from alignment at ch4:1516219..1519459- (Aspergillus niger KJC3)
CCGTGCCGTTTCTCAACGGTTCTCGTTCCGGACAGAACAATTTTGGGCGA
AACAATATAATTCCGGATCTGCATGAAAGCATGAGTGGCCACTGGGGGAA
AGCCATAATCCTACTACAAATGACCAAAACAACACATTCACAGTCAACCT
GAGGCGCTTAATCGTAGCCTAGAAGCATTCCATTCTTCAACGAAGCACCG
CTGTTACCCTCTGAACCATCCCCAATTGCCAAGCCAGTAACCACTACAGG
ATGCACGCCAGTTGACCAGACACTGTCTGCAGTCTTATGGTTGAACATGT
CGGCCATCGGCACCAAGTTAAGCTGACTTAGATTCAGAGCTACGGACGTC
GATGCTCCGCAAGATGCGCTCTGCAAAACGCAAGTCACGTCATATCAGTC
CAAGCTCATCCGCATCATCCAATAAAGAGCGCCAGCACTCCAAGTCAGAT
TGGGATGAATTTACGAGCGATCCATTCAATCCGCGCTTTAGACTTCCAGT
CCAATGGCCTTCAGCCCAAGATCTGGACTACCTTTAGGTGCCGTGCACTG
GCTCGAGCCATGCCGACGATAGCCTTTATGGAGCCAGGGGCTTGGCCAGT
TACCCGCGGAGACTGACGAGCTTCGGTAATTTTCATTCCCAGAGGCACCG
GAGAGCAGTTCATGATGCAAGATTGACTGTTCACTGGGAGCGTGACTCCT
GCAATTATTCGAGACTGCAAGTGATTCCCTTCTGCTGACTCCGAAGCGGG
AGAGAGTCTGGTTCCTTACCCTTTTGGGCGATTCTATGAGGTATTTTGGG
CCGTAACACTGACCGGTATTCAGCCAGGTGCAGCCCCGGCACGGCCTCGC
ACGCTTGATGTCAAGCGATCAGGGAACTACCCCAGATATCAGAAGCAGGA
GAAACTTCTGGGGATTGAAGAGCCAGACACTGTAGCGGAATTACGGTTCA
GCACAACATCGGCAACATGGCAAAGGTTAGCCGAATTGACCCGACGCTCA
CGGGGCGGATGATTACATACGCGAGGCATACAGTATCGATACCGGGCCGC
CAGCTTTTGCTGGCGAACCTCCAGAAAGCTTCTTGTCCCAACATCGTTTT
TCCCTATCATCCTCTAACCACTTGAGCCCGTCTCCTCCCACCTCCAATTG
TCCCCTCCCCTCCCCTTCGTTGCTTGTTCACTGGGAGGTCTGGTAGTCCG
CTGTGCTTTCTATATCCTTTGACTTTTTCCTTTGCCCTTTCGCCTCCTTT
TCACCATGTTCCGGAGTCTTTTGCCGCGGGCGACTCCGCGGGTTGCCCTC
CGCTGTGCCGGTCCCAAGGCCGTTCCCTCTACCTTCGTCGCTGCTCCTTC
TCTCGCCTCCTTTGGACGCACACAACGTGGCTATGCCTCTGAGTCAGGTA
GGTGACCTTTTTACTTTGCGATGGGCCCGTCGCAGACGGTGCCTGCGCTT
CCGAAAAAAGTGGCCCCCGGCTAACCGTCGGCTGGAATTAACGCAGGCGA
ACACGATCTTGTCATCATCGGTGGTGGTGTCGCTGGTTACGTTGCTGCCA
TCAAGGCCGGTCAGGAAGGTCTGAAGGTGCGCTATCTATCGTTCCTCGAA
ATGTTCCGGCTGGACGATCCCTCTAACGACTTCATTTTCACAGACCGCAT
GTATCGAGAAGCGTGGCCGTCTGGGCGGTACCTGCCTGAACGTCGGCTGT
ATCCCCTCGAAATCCCTGCTCAACAACTCCCACCTCTACCACCAGATTCT
CCACGACACGAAAAAGCGCGGTATCGAGGTCGGTGATGTGAAGCTGAACC
TTGAGCAGATGATGAAGGCCAAGGACACCTCCGTCGAGGGTCTGACTAAG
GGTATCGAATTCTTGTTCAAGAAGAACGGTGTCGACTACATCAAGGGTAC
TGGTGCTCTTGTTGACCAGAACACCGTCAAGGTTAACCTCCTTGAGGGTG
GTGAGCAGACTCTGCGCGGAAAGAACATCCTCATTGCCACCGGTAGTGAG
GCTACTCCTTTCCCCGGCCTCAACATTGACGAGAAGAGAATCATCACCAG
CACTGGTGCCCTCTCCCTCAAGGAGGTCCCCAAGAAGATGATCGTCATCG
GTGGTGGAATCATTGGTCTGGAAATGGTGCGTATACCTGGTGGAATGCAT
TCCGATTTTGCCGTTTGAAAATCCATGCTCATGGTTTCTTTTTCTACCCC
TCAACAGGCCTCTGTTTGGTCCCGCCTCGGCTCTGAGGTTACCGTCGTCG
AGTTCCTGAACCAGATCGGTGGTCCCGGCATGGACGCCGACATCGCCAAG
CAGGCCCAGAAGATCCTCCAGAAGCAGGGTATCAAGTTCAAGACCGGCAC
CAAGGTTACCAAGGGTGACGACAGCGGTGCTACCGTCGCTCTGAGCGTTG
AGGCCGCCAAGGGTGGTAAGGAGGAGACCCTCGACGCTGACGTTGTCCTC
GTCGCCATCGGTCGCCGCCCCTACACCGAGGGTCTCAACCTCGAGAGCGT
CGGTGTCGAGAAGGACGAGCGCGGCCGTCTGGTCATCGACCAGGAGTACC
GCACCAAGATCCCCAACATCCGCGTGATCGGTGACTGCACTTTCGGACCC
ATGCTTGCCCACAAGGCCGAGGAGGAGGCCGTCGCTGCCATCGAGTACAT
CAAGAAGGGTTACGGCCACGTCAACTACGGCTGCATCCCCAGCGTCATGT
ACACCCACCCCGAGGTCGCTTGGGTCGGCCAGAACGAGCAGGAAGTCAAG
GCTGCCGGCATCAAGTACCGCGTCGGTACCTTCCCCTTCAGCGCCAACTC
CCGTGCCAAGACCAATCTCGAGACTGAGGGTCAGGTCAAGTTCATCGCCG
ATGCTGAGACCGACCGCATCCTCGGTGTCCACATCATCGGCCCCAACGCC
GGTGAGATGATCGCCGAGGCCACCCTGGCTGTCGAGTACGGTGCCTCTTG
CGAGGACATTGCTCGTACCTGCCACGCTCACCCTACCCTGGCTGAGGCCT
TCAAGGAGGCTGCCATGGCTACCTACTCCAAGGCCATCCACTTCTAAGCA
GCTCCCCCCCTGTCTTGATCATGAAACCATACACACCCACCCGCATTATC
CTGTACCCTTTTTGGCCTCTTGTCTCTTATCTTAGTCTAGCTCAGCTAGT
CACTTCCGTGTAGCATTGACCTCATTAAATTTTCCTATCTTTGGTTGTGT
ATTCAAATATAACGAAATCAATAGTACTGCCTAACATTACA back to topCoding sequence (CDS) from alignment at ch4:1516219..1519459- >KJC3_005078-T1 ID=KJC3_005078-T1|Name=KJC3_005078-T1|organism=Aspergillus niger KJC3|type=CDS|length=6180bp|location=Sequence derived from alignment at ch4:1516219..1519459- (Aspergillus niger KJC3)
GCCTCTGTTTGGTCCCGCCTCGGCTCTGAGGTTACCGTCGTCGAGTTCCT
GAACCAGATCGGTGGTCCCGGCATGGACGCCGACATCGCCAAGCAGGCCC
AGAAGATCCTCCAGAAGCAGGGTATCAAGTTCAAGACCGGCACCAAGGTT
ACCAAGGGTGACGACAGCGGTGCTACCGTCGCTCTGAGCGTTGAGGCCGC
CAAGGGTGGTAAGGAGGAGACCCTCGACGCTGACGTTGTCCTCGTCGCCA
TCGGTCGCCGCCCCTACACCGAGGGTCTCAACCTCGAGAGCGTCGGTGTC
GAGAAGGACGAGCGCGGCCGTCTGGTCATCGACCAGGAGTACCGCACCAA
GATCCCCAACATCCGCGTGATCGGTGACTGCACTTTCGGACCCATGCTTG
CCCACAAGGCCGAGGAGGAGGCCGTCGCTGCCATCGAGTACATCAAGAAG
GGTTACGGCCACGTCAACTACGGCTGCATCCCCAGCGTCATGTACACCCA
CCCCGAGGTCGCTTGGGTCGGCCAGAACGAGCAGGAAGTCAAGGCTGCCG
GCATCAAGTACCGCGTCGGTACCTTCCCCTTCAGCGCCAACTCCCGTGCC
AAGACCAATCTCGAGACTGAGGGTCAGGTCAAGTTCATCGCCGATGCTGA
GACCGACCGCATCCTCGGTGTCCACATCATCGGCCCCAACGCCGGTGAGA
TGATCGCCGAGGCCACCCTGGCTGTCGAGTACGGTGCCTCTTGCGAGGAC
ATTGCTCGTACCTGCCACGCTCACCCTACCCTGGCTGAGGCCTTCAAGGA
GGCTGCCATGGCTACCTACTCCAAGGCCATCCACTTCTAAACCGCATGTA
TCGAGAAGCGTGGCCGTCTGGGCGGTACCTGCCTGAACGTCGGCTGTATC
CCCTCGAAATCCCTGCTCAACAACTCCCACCTCTACCACCAGATTCTCCA
CGACACGAAAAAGCGCGGTATCGAGGTCGGTGATGTGAAGCTGAACCTTG
AGCAGATGATGAAGGCCAAGGACACCTCCGTCGAGGGTCTGACTAAGGGT
ATCGAATTCTTGTTCAAGAAGAACGGTGTCGACTACATCAAGGGTACTGG
TGCTCTTGTTGACCAGAACACCGTCAAGGTTAACCTCCTTGAGGGTGGTG
AGCAGACTCTGCGCGGAAAGAACATCCTCATTGCCACCGGTAGTGAGGCT
ACTCCTTTCCCCGGCCTCAACATTGACGAGAAGAGAATCATCACCAGCAC
TGGTGCCCTCTCCCTCAAGGAGGTCCCCAAGAAGATGATCGTCATCGGTG
GTGGAATCATTGGTCTGGAAATGGCGAACACGATCTTGTCATCATCGGTG
GTGGTGTCGCTGGTTACGTTGCTGCCATCAAGGCCGGTCAGGAAGGTCTG
AAGATGTTCCGGAGTCTTTTGCCGCGGGCGACTCCGCGGGTTGCCCTCCG
CTGTGCCGGTCCCAAGGCCGTTCCCTCTACCTTCGTCGCTGCTCCTTCTC
TCGCCTCCTTTGGACGCACACAACGTGGCTATGCCTCTGAGTCAGGCCTC
TGTTTGGTCCCGCCTCGGCTCTGAGGTTACCGTCGTCGAGTTCCTGAACC
AGATCGGTGGTCCCGGCATGGACGCCGACATCGCCAAGCAGGCCCAGAAG
ATCCTCCAGAAGCAGGGTATCAAGTTCAAGACCGGCACCAAGGTTACCAA
GGGTGACGACAGCGGTGCTACCGTCGCTCTGAGCGTTGAGGCCGCCAAGG
GTGGTAAGGAGGAGACCCTCGACGCTGACGTTGTCCTCGTCGCCATCGGT
CGCCGCCCCTACACCGAGGGTCTCAACCTCGAGAGCGTCGGTGTCGAGAA
GGACGAGCGCGGCCGTCTGGTCATCGACCAGGAGTACCGCACCAAGATCC
CCAACATCCGCGTGATCGGTGACTGCACTTTCGGACCCATGCTTGCCCAC
AAGGCCGAGGAGGAGGCCGTCGCTGCCATCGAGTACATCAAGAAGGGTTA
CGGCCACGTCAACTACGGCTGCATCCCCAGCGTCATGTACACCCACCCCG
AGGTCGCTTGGGTCGGCCAGAACGAGCAGGAAGTCAAGGCTGCCGGCATC
AAGTACCGCGTCGGTACCTTCCCCTTCAGCGCCAACTCCCGTGCCAAGAC
CAATCTCGAGACTGAGGGTCAGGTCAAGTTCATCGCCGATGCTGAGACCG
ACCGCATCCTCGGTGTCCACATCATCGGCCCCAACGCCGGTGAGATGATC
GCCGAGGCCACCCTGGCTGTCGAGTACGGTGCCTCTTGCGAGGACATTGC
TCGTACCTGCCACGCTCACCCTACCCTGGCTGAGGCCTTCAAGGAGGCTG
CCATGGCTACCTACTCCAAGGCCATCCACTTCTAAACCGCATGTATCGAG
AAGCGTGGCCGTCTGGGCGGTACCTGCCTGAACGTCGGCTGTATCCCCTC
GAAATCCCTGCTCAACAACTCCCACCTCTACCACCAGATTCTCCACGACA
CGAAAAAGCGCGGTATCGAGGTCGGTGATGTGAAGCTGAACCTTGAGCAG
ATGATGAAGGCCAAGGACACCTCCGTCGAGGGTCTGACTAAGGGTATCGA
ATTCTTGTTCAAGAAGAACGGTGTCGACTACATCAAGGGTACTGGTGCTC
TTGTTGACCAGAACACCGTCAAGGTTAACCTCCTTGAGGGTGGTGAGCAG
ACTCTGCGCGGAAAGAACATCCTCATTGCCACCGGTAGTGAGGCTACTCC
TTTCCCCGGCCTCAACATTGACGAGAAGAGAATCATCACCAGCACTGGTG
CCCTCTCCCTCAAGGAGGTCCCCAAGAAGATGATCGTCATCGGTGGTGGA
ATCATTGGTCTGGAAATGGCGAACACGATCTTGTCATCATCGGTGGTGGT
GTCGCTGGTTACGTTGCTGCCATCAAGGCCGGTCAGGAAGGTCTGAAGAT
GTTCCGGAGTCTTTTGCCGCGGGCGACTCCGCGGGTTGCCCTCCGCTGTG
CCGGTCCCAAGGCCGTTCCCTCTACCTTCGTCGCTGCTCCTTCTCTCGCC
TCCTTTGGACGCACACAACGTGGCTATGCCTCTGAGTCAGGCCTCTGTTT
GGTCCCGCCTCGGCTCTGAGGTTACCGTCGTCGAGTTCCTGAACCAGATC
GGTGGTCCCGGCATGGACGCCGACATCGCCAAGCAGGCCCAGAAGATCCT
CCAGAAGCAGGGTATCAAGTTCAAGACCGGCACCAAGGTTACCAAGGGTG
ACGACAGCGGTGCTACCGTCGCTCTGAGCGTTGAGGCCGCCAAGGGTGGT
AAGGAGGAGACCCTCGACGCTGACGTTGTCCTCGTCGCCATCGGTCGCCG
CCCCTACACCGAGGGTCTCAACCTCGAGAGCGTCGGTGTCGAGAAGGACG
AGCGCGGCCGTCTGGTCATCGACCAGGAGTACCGCACCAAGATCCCCAAC
ATCCGCGTGATCGGTGACTGCACTTTCGGACCCATGCTTGCCCACAAGGC
CGAGGAGGAGGCCGTCGCTGCCATCGAGTACATCAAGAAGGGTTACGGCC
ACGTCAACTACGGCTGCATCCCCAGCGTCATGTACACCCACCCCGAGGTC
GCTTGGGTCGGCCAGAACGAGCAGGAAGTCAAGGCTGCCGGCATCAAGTA
CCGCGTCGGTACCTTCCCCTTCAGCGCCAACTCCCGTGCCAAGACCAATC
TCGAGACTGAGGGTCAGGTCAAGTTCATCGCCGATGCTGAGACCGACCGC
ATCCTCGGTGTCCACATCATCGGCCCCAACGCCGGTGAGATGATCGCCGA
GGCCACCCTGGCTGTCGAGTACGGTGCCTCTTGCGAGGACATTGCTCGTA
CCTGCCACGCTCACCCTACCCTGGCTGAGGCCTTCAAGGAGGCTGCCATG
GCTACCTACTCCAAGGCCATCCACTTCTAAACCGCATGTATCGAGAAGCG
TGGCCGTCTGGGCGGTACCTGCCTGAACGTCGGCTGTATCCCCTCGAAAT
CCCTGCTCAACAACTCCCACCTCTACCACCAGATTCTCCACGACACGAAA
AAGCGCGGTATCGAGGTCGGTGATGTGAAGCTGAACCTTGAGCAGATGAT
GAAGGCCAAGGACACCTCCGTCGAGGGTCTGACTAAGGGTATCGAATTCT
TGTTCAAGAAGAACGGTGTCGACTACATCAAGGGTACTGGTGCTCTTGTT
GACCAGAACACCGTCAAGGTTAACCTCCTTGAGGGTGGTGAGCAGACTCT
GCGCGGAAAGAACATCCTCATTGCCACCGGTAGTGAGGCTACTCCTTTCC
CCGGCCTCAACATTGACGAGAAGAGAATCATCACCAGCACTGGTGCCCTC
TCCCTCAAGGAGGTCCCCAAGAAGATGATCGTCATCGGTGGTGGAATCAT
TGGTCTGGAAATGGCGAACACGATCTTGTCATCATCGGTGGTGGTGTCGC
TGGTTACGTTGCTGCCATCAAGGCCGGTCAGGAAGGTCTGAAGATGTTCC
GGAGTCTTTTGCCGCGGGCGACTCCGCGGGTTGCCCTCCGCTGTGCCGGT
CCCAAGGCCGTTCCCTCTACCTTCGTCGCTGCTCCTTCTCTCGCCTCCTT
TGGACGCACACAACGTGGCTATGCCTCTGAGTCAGGCCTCTGTTTGGTCC
CGCCTCGGCTCTGAGGTTACCGTCGTCGAGTTCCTGAACCAGATCGGTGG
TCCCGGCATGGACGCCGACATCGCCAAGCAGGCCCAGAAGATCCTCCAGA
AGCAGGGTATCAAGTTCAAGACCGGCACCAAGGTTACCAAGGGTGACGAC
AGCGGTGCTACCGTCGCTCTGAGCGTTGAGGCCGCCAAGGGTGGTAAGGA
GGAGACCCTCGACGCTGACGTTGTCCTCGTCGCCATCGGTCGCCGCCCCT
ACACCGAGGGTCTCAACCTCGAGAGCGTCGGTGTCGAGAAGGACGAGCGC
GGCCGTCTGGTCATCGACCAGGAGTACCGCACCAAGATCCCCAACATCCG
CGTGATCGGTGACTGCACTTTCGGACCCATGCTTGCCCACAAGGCCGAGG
AGGAGGCCGTCGCTGCCATCGAGTACATCAAGAAGGGTTACGGCCACGTC
AACTACGGCTGCATCCCCAGCGTCATGTACACCCACCCCGAGGTCGCTTG
GGTCGGCCAGAACGAGCAGGAAGTCAAGGCTGCCGGCATCAAGTACCGCG
TCGGTACCTTCCCCTTCAGCGCCAACTCCCGTGCCAAGACCAATCTCGAG
ACTGAGGGTCAGGTCAAGTTCATCGCCGATGCTGAGACCGACCGCATCCT
CGGTGTCCACATCATCGGCCCCAACGCCGGTGAGATGATCGCCGAGGCCA
CCCTGGCTGTCGAGTACGGTGCCTCTTGCGAGGACATTGCTCGTACCTGC
CACGCTCACCCTACCCTGGCTGAGGCCTTCAAGGAGGCTGCCATGGCTAC
CTACTCCAAGGCCATCCACTTCTAAACCGCATGTATCGAGAAGCGTGGCC
GTCTGGGCGGTACCTGCCTGAACGTCGGCTGTATCCCCTCGAAATCCCTG
CTCAACAACTCCCACCTCTACCACCAGATTCTCCACGACACGAAAAAGCG
CGGTATCGAGGTCGGTGATGTGAAGCTGAACCTTGAGCAGATGATGAAGG
CCAAGGACACCTCCGTCGAGGGTCTGACTAAGGGTATCGAATTCTTGTTC
AAGAAGAACGGTGTCGACTACATCAAGGGTACTGGTGCTCTTGTTGACCA
GAACACCGTCAAGGTTAACCTCCTTGAGGGTGGTGAGCAGACTCTGCGCG
GAAAGAACATCCTCATTGCCACCGGTAGTGAGGCTACTCCTTTCCCCGGC
CTCAACATTGACGAGAAGAGAATCATCACCAGCACTGGTGCCCTCTCCCT
CAAGGAGGTCCCCAAGAAGATGATCGTCATCGGTGGTGGAATCATTGGTC
TGGAAATGGCGAACACGATCTTGTCATCATCGGTGGTGGTGTCGCTGGTT
ACGTTGCTGCCATCAAGGCCGGTCAGGAAGGTCTGAAGATGTTCCGGAGT
CTTTTGCCGCGGGCGACTCCGCGGGTTGCCCTCCGCTGTGCCGGTCCCAA
GGCCGTTCCCTCTACCTTCGTCGCTGCTCCTTCTCTCGCCTCCTTTGGAC
GCACACAACGTGGCTATGCCTCTGAGTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045454 | cell redox homeostasis |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0004148 | dihydrolipoyl dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005078-T1.utr3p1 | KJC3_005078-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012999 |
| DBxref | InterPro:IPR016156 |
| DBxref | InterPro:IPR001100 |
| DBxref | InterPro:IPR006258 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR004099 |
| DBxref | InterPro:IPR023753 |
| DBxref | PFAM:PF02852 |
| DBxref | PFAM:PF07992 |
| DBxref | PFAM:PF00070 |
| DBxref | PFAM:PF13450 |
| Product | D-lactate ferricytochrome c oxidoreductase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1516219..1519459 - |
|
