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KJC3_005101-T1, KJC3_005101-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005101-T1
Unique NameKJC3_005101-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1575532..1578059-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005101-T1 ID=KJC3_005101-T1|Name=KJC3_005101-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2528bp|location=Sequence derived from alignment at ch4:1575532..1578059- (Aspergillus niger KJC3)
CTCTCTCCTCTTCCTCTTCTTCTTCCTCCTCCTCTTTTCCTTCTTCCACC
TTTTCCTTCTTTGCTCGCTTCCCACCACTTCCTCTCCGCTTCCCATCTCC
CTCCTCCCTCCCTCCTCATTTCCTCTGCTTCTTTCTCCCTCTTCTTCCTC
TCCATTCTTCATCCTCCTTTCCTCCTCTTATTCCCTCCACCTCTCTTCTT
TCCCTTTCCCTTCTTCCTTCCGACGTCCCTTTCGTCTTCCCACCCCATCT
CCTAAATCCCTCCACCTTTTCCCCCGCCCGCCGAAAACCCCTCTGAATCC
ATCCTCGTTGCCCCCCCCTCTCCGGTCTCCCATTCGACTACCTGCTCCTC
TTCCCGGATTTCGCAGATTAATTTTCATCTCTTCGGATTTCCATCGTCTT
TCTGCTTCACTTTACGACTTTAGGTAAGAACCATTATATTTTCCTGCTCC
AATCCTGCGCGCCACCTCATTTGCTTCTTTTCCTGTGTTATCCCTTCACC
GTGACATCTCGCGAAAATCATCACACCCCCTCCCGTGTGCCAACACTAAT
TCGTGGGAAAAGTTCCGTCAACGAAAAACCTTACCTTTTCTATCACCAGA
ATTTTTCTATCGCCCAAACTTCACCATTCCTCTTTTTACCGACATAATGG
ACCCTACCGAGTTGCACGATACCACCATGGTCGATGAGACCTCCCCCAAC
AACGTCGACATGATTGACGATGTCGATATTGAGACGACGCCCAAGACTGA
GGAAGAGTACGCTCAGTCTATGCTGACTCTTCGCGCCATCGTTTCGTCCA
AAGAAGCCGGCATCATCATTGGCAAGTCTGGCAAGAATGTTGCTGACCTG
CGTGACGAAACCGGCGTCAAGGCTGGTGTGAGCAAGGTGGTTCCTGGTGT
TCATGACCGCGTCTTAACCGTCACTGGTCCTCTGAACGGCACTGCCAGAG
CCTATGCCTTGGTTGCCAAGGGTTTGCTCGAGGGCGCCCCGCAGATGGGC
ATGGGTGGCATTGTGTCCAACAATGGAACTCACCGTAAGTCATCCAAGTT
CTTCTACTCAACCAATATTTACTAGTGCCTTACAAACTGACTCTTGTGTA
GCCGTTCGGCTTTTGATCTCTCACAACCAGATGGGTACTATCATCGGACG
CCAAGGTCTCAAGATCAAGCACATTCAGGATGCATCGGGTGTGCGCATGG
TCGCGCAGAAGGAAATGCTTCCCCAGTCGACTGAGCGCATTGTCGAAGTG
CAGGGCACCCCCGAGGGTATCGAGAAGGCCGTCTGGGAAATCGGAAAATG
CCTGATTGACGACTGGCAGCGCGGTACCGGTACTATTCTCTACAACCCCG
CTGTCCGTGCGTCTGTTGGAACCACCACCAGCACCAGCACCATGAACCAG
AGCGTCGGCAATGGCTACAACAGCCGTCCTTACAACCGCACCGGTAACGG
TGCTGACTTCAGCGACCAGTCCGGTGGCTACGGCAGGCGATCCAACCCCG
ACACCAGCAACCGTGGTTATCCGCTTGTCACCGAAGATGGCGAGGAAATC
CAAACACAGAACATCAGCATCCCCGCCGACATGGTTGGCTGCATCATTGG
CAGAGGTGGTAGCAAGATCACCGAGATCCGTAGGAGCTCTGGAGCCCGGA
TCTCCATCGCCAAGGCTCCCCATGACGAAACGGGCGAGCGTATGTTCACC
ATCATGGGTAGCGCTCAGGCGAATGAGAAGGCTCTTTACCTTCTGTATGA
GAACCTCGAGGCTGAGAAGACCCGCCGCAGCCAGCTTCAGGAGTAAACGA
CCAGCACAGCTTCACCCTCTCTTCACCCGCTCGACCCTCAATGAACATCC
TTTTTCGGAAAACTCTAGTCGCGCGATCACCACTGCCCCTTCTTGTGCTA
CTCCTTTTTGATTCTTGATGCTGTCGTTTTCTCATACTATCATATTCTCT
GTTACTCTATAATTCCTCTCGTATGTGGAGCTTCTTGCGCTTTACAAGAA
GCCGGAGCCTGCTGAGGCGGACCATGCATGCCTGTTAGATACCAGTACTA
TCTCCTTGAATGAACCGCACTCGGAACCAACGACATCATGTCCCCCCACT
GATGTTCCTGACTTCTCCCTTTACCCGCCCGTTTCGTTCCGTATCCTACC
TAGTCGTGCCTTTCCGTCGCCGTTGATTGAAAAGTTGCTCTTCCTTCCCA
TCCGAAACCTCAAACCTACAATGAAACTGGGATCCCCCCTTCACACAACT
CGCAATCTTTTACACACGCACACACACTGCCTTTGTTCTGTTCTACTAAT
CCTCTCTTCTTTTCTTGTCGAGCAACTATCCTCACTTACCTGTCACATGA
AACATCTAAACCCAGGGGGCTACCCAGCTGTTTTTCTCTATTATATGCAA
GGGTCCCTCAAATTTTCATCTCCGGGCTTCTCAGGCATGTACAATCAGGG
ACCAGGACTATCGATACTACAAAATGAAATGAAAACCTAGTGTGATGGAA
CATGAACATTCTCCGTTCCAGAGGATGC
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Coding sequence (CDS) from alignment at ch4:1575532..1578059-

>KJC3_005101-T1 ID=KJC3_005101-T1|Name=KJC3_005101-T1|organism=Aspergillus niger KJC3|type=CDS|length=2166bp|location=Sequence derived from alignment at ch4:1575532..1578059- (Aspergillus niger KJC3)
CCGTTCGGCTTTTGATCTCTCACAACCAGATGGGTACTATCATCGGACGC
CAAGGTCTCAAGATCAAGCACATTCAGGATGCATCGGGTGTGCGCATGGT
CGCGCAGAAGGAAATGCTTCCCCAGTCGACTGAGCGCATTGTCGAAGTGC
AGGGCACCCCCGAGGGTATCGAGAAGGCCGTCTGGGAAATCGGAAAATGC
CTGATTGACGACTGGCAGCGCGGTACCGGTACTATTCTCTACAACCCCGC
TGTCCGTGCGTCTGTTGGAACCACCACCAGCACCAGCACCATGAACCAGA
GCGTCGGCAATGGCTACAACAGCCGTCCTTACAACCGCACCGGTAACGGT
GCTGACTTCAGCGACCAGTCCGGTGGCTACGGCAGGCGATCCAACCCCGA
CACCAGCAACCGTGGTTATCCGCTTGTCACCGAAGATGGCGAGGAAATCC
AAACACAGAACATCAGCATCCCCGCCGACATGGTTGGCTGCATCATTGGC
AGAGGTGGTAGCAAGATCACCGAGATCCGTAGGAGCTCTGGAGCCCGGAT
CTCCATCGCCAAGGCTCCCCATGACGAAACGGGCGAGCGTATGTTCACCA
TCATGGGTAGCGCTCAGGCGAATGAGAAGGCTCTTTACCTTCTGTATGAG
AACCTCGAGGCTGAGAAGACCCGCCGCAGCCAGCTTCAGGAGTAAATGGA
CCCTACCGAGTTGCACGATACCACCATGGTCGATGAGACCTCCCCCAACA
ACGTCGACATGATTGACGATGTCGATATTGAGACGACGCCCAAGACTGAG
GAAGAGTACGCTCAGTCTATGCTGACTCTTCGCGCCATCGTTTCGTCCAA
AGAAGCCGGCATCATCATTGGCAAGTCTGGCAAGAATGTTGCTGACCTGC
GTGACGAAACCGGCGTCAAGGCTGGTGTGAGCAAGGTGGTTCCTGGTGTT
CATGACCGCGTCTTAACCGTCACTGGTCCTCTGAACGGCACTGCCAGAGC
CTATGCCTTGGTTGCCAAGGGTTTGCTCGAGGGCGCCCCGCAGATGGGCA
TGGGTGGCATTGTGTCCAACAATGGAACTCACCCCGTTCGGCTTTTGATC
TCTCACAACCAGATGGGTACTATCATCGGACGCCAAGGTCTCAAGATCAA
GCACATTCAGGATGCATCGGGTGTGCGCATGGTCGCGCAGAAGGAAATGC
TTCCCCAGTCGACTGAGCGCATTGTCGAAGTGCAGGGCACCCCCGAGGGT
ATCGAGAAGGCCGTCTGGGAAATCGGAAAATGCCTGATTGACGACTGGCA
GCGCGGTACCGGTACTATTCTCTACAACCCCGCTGTCCGTGCGTCTGTTG
GAACCACCACCAGCACCAGCACCATGAACCAGAGCGTCGGCAATGGCTAC
AACAGCCGTCCTTACAACCGCACCGGTAACGGTGCTGACTTCAGCGACCA
GTCCGGTGGCTACGGCAGGCGATCCAACCCCGACACCAGCAACCGTGGTT
ATCCGCTTGTCACCGAAGATGGCGAGGAAATCCAAACACAGAACATCAGC
ATCCCCGCCGACATGGTTGGCTGCATCATTGGCAGAGGTGGTAGCAAGAT
CACCGAGATCCGTAGGAGCTCTGGAGCCCGGATCTCCATCGCCAAGGCTC
CCCATGACGAAACGGGCGAGCGTATGTTCACCATCATGGGTAGCGCTCAG
GCGAATGAGAAGGCTCTTTACCTTCTGTATGAGAACCTCGAGGCTGAGAA
GACCCGCCGCAGCCAGCTTCAGGAGTAAATGGACCCTACCGAGTTGCACG
ATACCACCATGGTCGATGAGACCTCCCCCAACAACGTCGACATGATTGAC
GATGTCGATATTGAGACGACGCCCAAGACTGAGGAAGAGTACGCTCAGTC
TATGCTGACTCTTCGCGCCATCGTTTCGTCCAAAGAAGCCGGCATCATCA
TTGGCAAGTCTGGCAAGAATGTTGCTGACCTGCGTGACGAAACCGGCGTC
AAGGCTGGTGTGAGCAAGGTGGTTCCTGGTGTTCATGACCGCGTCTTAAC
CGTCACTGGTCCTCTGAACGGCACTGCCAGAGCCTATGCCTTGGTTGCCA
AGGGTTTGCTCGAGGGCGCCCCGCAGATGGGCATGGGTGGCATTGTGTCC
AACAATGGAACTCACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005101KJC3_005101Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005101-T1KJC3_005101-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005101-T1.cdsKJC3_005101-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005101-T1.utr3p1KJC3_005101-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005101-T1.exon3KJC3_005101-T1.exon3Aspergillus niger KJC3exon
KJC3_005101-T1.exon2KJC3_005101-T1.exon2Aspergillus niger KJC3exon
KJC3_005101-T1.exon1KJC3_005101-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005101-T1.utr5p2KJC3_005101-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005101-T1.utr5p1KJC3_005101-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004088
DBxrefInterPro:IPR036612
DBxrefInterPro:IPR004087
DBxrefPFAM:PF00013
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1575532..1578059 -
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