|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1597982..1600165+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005108-T1 ID=KJC3_005108-T1|Name=KJC3_005108-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2184bp|location=Sequence derived from alignment at ch4:1597982..1600165+ (Aspergillus niger KJC3)
ATGGCTACCGCATTCCCTGATGAAATCAGGGCTTCGCCCGAAGCGGCCTC
GCCGGCGAGCCCGGCGTCTTCAACTGGCCAGATTCCTTTGGAACAGCCGC
CCAAACTCAAGGGACGTCACAAGTTGCTACAGAGCCTGCAGCGCATCTCG
TCAAGCCCGAGTCTGACCAGACGGGGCCGGTCCCATTCTACGGGATACCG
TCGTGACAACAAGGCCTCTTTGTCCTGTGTCTCCCTCTCCCAATCCGCAT
ATACTCCTTGCCTGGGTAATGGAAGTACCTCTCAACTCTATGGCGGATTG
AACGCCCGTCCAATCACCCCCGGTGCTGCTGCCTTTCCAGTAGACCATGA
CGGAAATCCTCGAATCCGCCTTGTCGGTTCCGACTCACCCAATGCGCGGA
CAGTTCCATTGCCTACCGATCTGCGACCAGGATCTCGTGGGTCCCCGTTG
GGATCGGATGCAGCCGATCAACCTGCCACGGCGCGGTCGTCCCCGAAGCC
AAAGAAGGTCTTTGATTTCTGGGGCAATATGCCTGATGAGCTGAAGATGC
GCATTTTCCAGTACCTCACCCCGAAGGAGATTGTCCGTTGCGCTGCTGTT
TCGAGGGCATGGAACAAAATGTGTTATGATGGACAGCTGTGGACCGAAGT
GGACACGACAGACTACTACCGCGATATCCCTAGCGATGGTCTCGTGAAGC
TGATTACCGCCGGTGGGCCATTCGTTCGCGATCTCAATCTCCGGGGCTGT
GTCCAACTGAAGGATAAGTGGAAGACTGAGGGCGATCGCATCACCGACTT
GTGCCGGAACGTCGTCAATTTCTCACTGGAAGGATGTCGCATCGACACTC
AATCGATCAACTGCTTTCTCTTGCGCAATCCTCGACTGGAGTATATCAAC
TTGTCCGGATTATCGTCTGTCAGTGACTCTGCCATGACGATTATCGCACA
GTCCTGCCCTCAACTTCAGATCTTGAATGTATCTTGGTGCACTTGCGTTC
ACACCGCGGGGCTAAAGAAGATTGTGAGCGCCTGTAACAACTTAAAGGAC
CTCCGAGCGAGTGAAATTCGTGGGTTCGACGACGTCGAATTCGCCCTACA
ACTATTCGAGCGGAACACCCTGGAACGCCTGATCATGAGCCGCACGGAGC
TTACGGACGAGTGCCTGAAGGCACTTGTGCATGGACTCGACCCCGAAATG
GACCTCCTTGAGGAACGAGCGCTTGTCCCTCCGCGACGACTGAAACACTT
GGACATTCACCAGTGCACCGAATTGACAGATGACGGTGTTAAGTGGCTTG
CCCACAATGTTCCGGACCTGGAAGGCCTGCAACTCTCACAATGCTCTGAA
CTCAGCGACGAATCCGTTATGGCGGTGATCCGGACCACTCCTCGTCTGAC
ACACCTCGACCTGGAGGACATGGAGAGGCTTTCCAACCATACGCTTCTCG
AGCTTGCCAAGTCCCCGTGTGCTGCGCGCCTGCAACACCTCAACATCAGC
TATTGTGAAAGCATTGGCGACATTGGAACCTTGCAGATCATGAAGAATTG
CCCTGCCCTCCGTTCCGTTGAAATGGACAACACCCGGGTGTCCGACCTGA
CCCTGATGGAGGCCAGCTTCCGCGTGCGCAAACGTGGCTACGATGAGAAC
CTTCCCAAAATTGGCCTCCGTCTGGTTGTATTTGACTGCGCCAATGTCAC
CTGGGCCGGTGTAAGAGAAGTCCTCTCAAGCAATGCCTACCTCCCGCGTG
CTACCCGCAAATCCATGCAAGCAGTCTCGGTTGTCACCCACACGGTAGAT
CCTAATCAGTCCACAACTGTGATTGCTTCCTCTATTACACCTCCCCCGCC
GCCACCCGTATACCCCAATGAAATTATCCATCTGAAGTGCTTCTATGGCT
GGCAGCCGACTGTGGATGAACACAACAAGCGAGTTCTCCGTGGTGATCTT
ATGGCTGCGAGCAGGCTGGATCGGAAGTGGGCCGAGTACATGATGGCAAC
CGAAGAAGCGGGTGCTCCAGGATCCGGGGTGAGAAGAAGACGGCGTCGAG
CCCGTGAAGCCGAGAGAATCTATAACGAAGACGACGAAGATGCAGCTTTT
GGTGTCGGAGCTGTCACTACACTTGGGGCAGGAAGACGGCGACACACTGA
AGGCGGCGGCACAGGAGGCTGCAGTGTCATGTAA back to topCoding sequence (CDS) from alignment at ch4:1597982..1600165+ >KJC3_005108-T1 ID=KJC3_005108-T1|Name=KJC3_005108-T1|organism=Aspergillus niger KJC3|type=CDS|length=2184bp|location=Sequence derived from alignment at ch4:1597982..1600165+ (Aspergillus niger KJC3)
ATGGCTACCGCATTCCCTGATGAAATCAGGGCTTCGCCCGAAGCGGCCTC
GCCGGCGAGCCCGGCGTCTTCAACTGGCCAGATTCCTTTGGAACAGCCGC
CCAAACTCAAGGGACGTCACAAGTTGCTACAGAGCCTGCAGCGCATCTCG
TCAAGCCCGAGTCTGACCAGACGGGGCCGGTCCCATTCTACGGGATACCG
TCGTGACAACAAGGCCTCTTTGTCCTGTGTCTCCCTCTCCCAATCCGCAT
ATACTCCTTGCCTGGGTAATGGAAGTACCTCTCAACTCTATGGCGGATTG
AACGCCCGTCCAATCACCCCCGGTGCTGCTGCCTTTCCAGTAGACCATGA
CGGAAATCCTCGAATCCGCCTTGTCGGTTCCGACTCACCCAATGCGCGGA
CAGTTCCATTGCCTACCGATCTGCGACCAGGATCTCGTGGGTCCCCGTTG
GGATCGGATGCAGCCGATCAACCTGCCACGGCGCGGTCGTCCCCGAAGCC
AAAGAAGGTCTTTGATTTCTGGGGCAATATGCCTGATGAGCTGAAGATGC
GCATTTTCCAGTACCTCACCCCGAAGGAGATTGTCCGTTGCGCTGCTGTT
TCGAGGGCATGGAACAAAATGTGTTATGATGGACAGCTGTGGACCGAAGT
GGACACGACAGACTACTACCGCGATATCCCTAGCGATGGTCTCGTGAAGC
TGATTACCGCCGGTGGGCCATTCGTTCGCGATCTCAATCTCCGGGGCTGT
GTCCAACTGAAGGATAAGTGGAAGACTGAGGGCGATCGCATCACCGACTT
GTGCCGGAACGTCGTCAATTTCTCACTGGAAGGATGTCGCATCGACACTC
AATCGATCAACTGCTTTCTCTTGCGCAATCCTCGACTGGAGTATATCAAC
TTGTCCGGATTATCGTCTGTCAGTGACTCTGCCATGACGATTATCGCACA
GTCCTGCCCTCAACTTCAGATCTTGAATGTATCTTGGTGCACTTGCGTTC
ACACCGCGGGGCTAAAGAAGATTGTGAGCGCCTGTAACAACTTAAAGGAC
CTCCGAGCGAGTGAAATTCGTGGGTTCGACGACGTCGAATTCGCCCTACA
ACTATTCGAGCGGAACACCCTGGAACGCCTGATCATGAGCCGCACGGAGC
TTACGGACGAGTGCCTGAAGGCACTTGTGCATGGACTCGACCCCGAAATG
GACCTCCTTGAGGAACGAGCGCTTGTCCCTCCGCGACGACTGAAACACTT
GGACATTCACCAGTGCACCGAATTGACAGATGACGGTGTTAAGTGGCTTG
CCCACAATGTTCCGGACCTGGAAGGCCTGCAACTCTCACAATGCTCTGAA
CTCAGCGACGAATCCGTTATGGCGGTGATCCGGACCACTCCTCGTCTGAC
ACACCTCGACCTGGAGGACATGGAGAGGCTTTCCAACCATACGCTTCTCG
AGCTTGCCAAGTCCCCGTGTGCTGCGCGCCTGCAACACCTCAACATCAGC
TATTGTGAAAGCATTGGCGACATTGGAACCTTGCAGATCATGAAGAATTG
CCCTGCCCTCCGTTCCGTTGAAATGGACAACACCCGGGTGTCCGACCTGA
CCCTGATGGAGGCCAGCTTCCGCGTGCGCAAACGTGGCTACGATGAGAAC
CTTCCCAAAATTGGCCTCCGTCTGGTTGTATTTGACTGCGCCAATGTCAC
CTGGGCCGGTGTAAGAGAAGTCCTCTCAAGCAATGCCTACCTCCCGCGTG
CTACCCGCAAATCCATGCAAGCAGTCTCGGTTGTCACCCACACGGTAGAT
CCTAATCAGTCCACAACTGTGATTGCTTCCTCTATTACACCTCCCCCGCC
GCCACCCGTATACCCCAATGAAATTATCCATCTGAAGTGCTTCTATGGCT
GGCAGCCGACTGTGGATGAACACAACAAGCGAGTTCTCCGTGGTGATCTT
ATGGCTGCGAGCAGGCTGGATCGGAAGTGGGCCGAGTACATGATGGCAAC
CGAAGAAGCGGGTGCTCCAGGATCCGGGGTGAGAAGAAGACGGCGTCGAG
CCCGTGAAGCCGAGAGAATCTATAACGAAGACGACGAAGATGCAGCTTTT
GGTGTCGGAGCTGTCACTACACTTGGGGCAGGAAGACGGCGACACACTGA
AGGCGGCGGCACAGGAGGCTGCAGTGTCATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001611 |
| DBxref | InterPro:IPR032675 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR006553 |
| DBxref | PFAM:PF13516 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1597982..1600165 + |
|
