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KJC3_005116-T1, KJC3_005116-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005116-T1
Unique NameKJC3_005116-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1612699..1614977+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005116-T1 ID=KJC3_005116-T1|Name=KJC3_005116-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2279bp|location=Sequence derived from alignment at ch4:1612699..1614977+ (Aspergillus niger KJC3)
TGTTCATCGAATTGACATACCCACTATGATACATTAACCCACTACTAGTC
AAAGGCATGGGATTATTATCTGATCATCTTATCTCCGACCAGGGCTTAGG
TCTTAGGGTTCCTCCTCTTATCGATAAGCCTCGGTCGGATGACACACTCA
CTAGTCCGCTTTAGGATGGTCCCGCAGCTGGTCCTGGCCTGAGGCTACCG
CAGCCAGTTCGGTCGTCATCATCCAGAGCCTGATTGGAAGGGGATCTATC
CGTCGAGAAAATCACATACTTATACTCTATCCCCTTAGTGACTGGTGATA
CATATGGAAATACTGGTCTCCTCAGCTTATAATTAAAGGTCGAGGAACTA
AGGGCATCTGCTACCACGCGAGGCTGTCTGTCCCAGTTATCAAAACATTA
CCCCGCCGTGCGAGGAACCTTGCTGCTCTACAGCCAAGATGCGTCTCGTC
AAGAACAAGATCGAGCACAATGGATCCGGAACGGTGACCTTGTGTCCTGA
GGAGCCTGAGGACATGGTGCGGTATACTCTGTTCCTGGTCGAGGGGTAGC
TCTTTGTTTAACTAACGGCTTCAGTGGCACGCATACAACCTCATCCGACC
GAACGATCTCCTCCGCGCCAGCGCTATTCGTCGTGTCACCACAACTCAAG
AAACCGGTTCCACTACCTCAGCTCGAGTCCACTTGATGCTCGAGATCCGT
GTCAAGAACCTCGACTTCGATCCGCAGAGCTCGCAGCTGCATGTTAGCGG
GACTATTGTGAACGAGACGGCACATACGAAGATCGGACAGCACCATACAC
TTGATCTGGAGCTGAATCGGAATTTCACATTAGAAAAGGAAGTTGGCGCG
GACGGCGAGGGCGTCGGATGGGACAGTATCGCGGTGCAGATGTTGAAGGA
TGCGGTGGATGAAGGGGGACAACGGAGGGCGGAGGCGGTGGCCGTGGTGA
TGCAGGAAGGGTTGGCGCATATTTGCTTTATCGGACAGTTTCAGACTATC
CTAAAGCAGAAGATTGAGATGTCGGTGCCCAGGAAACGACATGGTGGGGG
TGATCATGATAAGGTGGGTTGTACCATTATTGATAATCCATCCCGGTGTT
GGGGTTAGTGGTTTGTATGCTGACAGGTCTTCGTGGGAAAAGGGCATGTC
GAAATTCTTCCAGGTTACACTCGATACGCTGCTGCGCCAGCTTGAATTCA
ACACCAGCTCGGCTTCACTCACCAGCAGCGAGACCGTTCGGCCGGTTCTC
CTTGCATCGCCAGGCTTCGTGGCCTCCGGCTTCCAAAAGTACATCCAGTC
GCAGGCATCCACTTCGACGCCGGCGCTTAAACGCCTCCTACCCAGTATTG
TGGTTGTACACTCTGCTTCCGGTTATCTGCACTCGTTAGCGGAAGTCCTG
CAGTCCCCAGCTGTGAAAACCATTCTTGCCGACACCAAGTACGCGCGCGA
GACAAAGCTCATGGACGACTTCCTCGACCAGCTCCGCAAAGAAACCAACA
AAGCGACGTATGGTCCGCGCGAGGTTGAATTCGCTGTCGACCAGGGTGCC
GTTGGCCGCGGTGGTGGCGTGCTGATCATCTCCAATCGGCTGTTCAGGTC
ACAGGACGTGGCGGAGCGCAAACGCTGGGTATCGCTGGTAGATCGGGTAC
GGGATGTCGAGGGTGGAGAGGTGCGAGTGCTCAGCTCCGACCATGAGAGT
GGAAGGCGACTTGATGGGCTAGGAGGGGTGGCAGCCCTGTTGACGTTTCC
TATATTGGATGAGGATATAGAAGGGGAGGGGGAGGTCGAGCAATAGAGCC
TATGTTTTGGGTGTGCACAGCCCGGGCACCTGCTGCTACTCCCTTCCTCT
CGTAAACCCTGATGCTGGGTGTCTAGCCCCGTAACGTTGAACGAATGCAC
GACCCTCATAGCTAGTGTGTCTAAGACACTTATCATTCAAGTACCCGGAG
AAGGTCCGAACGGAATGAATGCAACGGCAAAGACGTGTACAACATTCAGC
AAGTCCCCCGAGGAGGGGGGGGAAGACAACAGCGACGCTAGAAGCGCAGT
ACCCATTCCTGGCGCTTGTTTCTGGAAATCCTGTGCTCCGCCATGCTGGC
GCAGAACTAACGGCAGGATTCGACGGAATGCAATTCAATTAGATGCTAGC
AGACGATCATGTTTTCATCGGTGTGCGCAAGATAACTGTGCCATGAACAC
TAGTCCTACACCCGAGGAGCCAAAGCAGGCGGTAAAACCAGCGCCATGGG
AAGAAGTTGACAATCCCTGTTGCTGCGGC
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Coding sequence (CDS) from alignment at ch4:1612699..1614977+

>KJC3_005116-T1 ID=KJC3_005116-T1|Name=KJC3_005116-T1|organism=Aspergillus niger KJC3|type=CDS|length=3663bp|location=Sequence derived from alignment at ch4:1612699..1614977+ (Aspergillus niger KJC3)
ATGCGTCTCGTCAAGAACAAGATCGAGCACAATGGATCCGGAACGGTGAC
CTTGTGTCCTGAGGAGCCTGAGGACATGTGGCACGCATACAACCTCATCC
GACCGAACGATCTCCTCCGCGCCAGCGCTATTCGTCGTGTCACCACAACT
CAAGAAACCGGTTCCACTACCTCAGCTCGAGTCCACTTGATGCTCGAGAT
CCGTGTCAAGAACCTCGACTTCGATCCGCAGAGCTCGCAGCTGCATGTTA
GCGGGACTATTGTGAACGAGACGGCACATACGAAGATCGGACAGCACCAT
ACACTTGATCTGGAGCTGAATCGGAATTTCACATTAGAAAAGGAAGTTGG
CGCGGACGGCGAGGGCGTCGGATGGGACAGTATCGCGGTGCAGATGTTGA
AGGATGCGGTGGATGAAGGGGGACAACGGAGGGCGGAGGCGGTGGCCGTG
GTGATGCAGGAAGGGTTGGCGCATATTTGCTTTATCGGACAGTTTCAGAC
TATCCTAAAGCAGAAGATTGAGATGTCGGTGCCCAGGAAACGACATGGTG
GGGGTGATCATGATAAGGGCATGTCGAAATTCTTCCAGGTTACACTCGAT
ACGCTGCTGCGCCAGCTTGAATTCAACACCAGCTCGGCTTCACTCACCAG
CAGCGAGACCGTTCGGCCGGTTCTCCTTGCATCGCCAGGCTTCGTGGCCT
CCGGCTTCCAAAAGTACATCCAGTCGCAGGCATCCACTTCGACGCCGGCG
CTTAAACGCCTCCTACCCAGTATTGTGGTTGTACACTCTGCTTCCGGTTA
TCTGCACTCGTTAGCGGAAGTCCTGCAGTCCCCAGCTGTGAAAACCATTC
TTGCCGACACCAAGTACGCGCGCGAGACAAAGCTCATGGACGACTTCCTC
GACCAGCTCCGCAAAGAAACCAACAAAGCGACGTATGGTCCGCGCGAGGT
TGAATTCGCTGTCGACCAGGGTGCCGTTGGCCGCGGTGGTGGCGTGCTGA
TCATCTCCAATCGGCTGTTCAGGTCACAGGACGTGGCGGAGCGCAAACGC
TGGGTATCGCTGGTAGATCGGGTACGGGATGTCGAGGGTGGAGAGGTGCG
AGTGCTCAGCTCCGACCATGAGAGTGGAAGGCGACTTGATGGGCTAGGAG
GGGTGGCAGCCCTGTTGACGTTTCCTATATTGGATGAGGATATAGAAGGG
GAGGGGGAGGTCGAGCAATAGATGCGTCTCGTCAAGAACAAGATCGAGCA
CAATGGATCCGGAACGGTGACCTTGTGTCCTGAGGAGCCTGAGGACATGT
GGCACGCATACAACCTCATCCGACCGAACGATCTCCTCCGCGCCAGCGCT
ATTCGTCGTGTCACCACAACTCAAGAAACCGGTTCCACTACCTCAGCTCG
AGTCCACTTGATGCTCGAGATCCGTGTCAAGAACCTCGACTTCGATCCGC
AGAGCTCGCAGCTGCATGTTAGCGGGACTATTGTGAACGAGACGGCACAT
ACGAAGATCGGACAGCACCATACACTTGATCTGGAGCTGAATCGGAATTT
CACATTAGAAAAGGAAGTTGGCGCGGACGGCGAGGGCGTCGGATGGGACA
GTATCGCGGTGCAGATGTTGAAGGATGCGGTGGATGAAGGGGGACAACGG
AGGGCGGAGGCGGTGGCCGTGGTGATGCAGGAAGGGTTGGCGCATATTTG
CTTTATCGGACAGTTTCAGACTATCCTAAAGCAGAAGATTGAGATGTCGG
TGCCCAGGAAACGACATGGTGGGGGTGATCATGATAAGGGCATGTCGAAA
TTCTTCCAGGTTACACTCGATACGCTGCTGCGCCAGCTTGAATTCAACAC
CAGCTCGGCTTCACTCACCAGCAGCGAGACCGTTCGGCCGGTTCTCCTTG
CATCGCCAGGCTTCGTGGCCTCCGGCTTCCAAAAGTACATCCAGTCGCAG
GCATCCACTTCGACGCCGGCGCTTAAACGCCTCCTACCCAGTATTGTGGT
TGTACACTCTGCTTCCGGTTATCTGCACTCGTTAGCGGAAGTCCTGCAGT
CCCCAGCTGTGAAAACCATTCTTGCCGACACCAAGTACGCGCGCGAGACA
AAGCTCATGGACGACTTCCTCGACCAGCTCCGCAAAGAAACCAACAAAGC
GACGTATGGTCCGCGCGAGGTTGAATTCGCTGTCGACCAGGGTGCCGTTG
GCCGCGGTGGTGGCGTGCTGATCATCTCCAATCGGCTGTTCAGGTCACAG
GACGTGGCGGAGCGCAAACGCTGGGTATCGCTGGTAGATCGGGTACGGGA
TGTCGAGGGTGGAGAGGTGCGAGTGCTCAGCTCCGACCATGAGAGTGGAA
GGCGACTTGATGGGCTAGGAGGGGTGGCAGCCCTGTTGACGTTTCCTATA
TTGGATGAGGATATAGAAGGGGAGGGGGAGGTCGAGCAATAGATGCGTCT
CGTCAAGAACAAGATCGAGCACAATGGATCCGGAACGGTGACCTTGTGTC
CTGAGGAGCCTGAGGACATGTGGCACGCATACAACCTCATCCGACCGAAC
GATCTCCTCCGCGCCAGCGCTATTCGTCGTGTCACCACAACTCAAGAAAC
CGGTTCCACTACCTCAGCTCGAGTCCACTTGATGCTCGAGATCCGTGTCA
AGAACCTCGACTTCGATCCGCAGAGCTCGCAGCTGCATGTTAGCGGGACT
ATTGTGAACGAGACGGCACATACGAAGATCGGACAGCACCATACACTTGA
TCTGGAGCTGAATCGGAATTTCACATTAGAAAAGGAAGTTGGCGCGGACG
GCGAGGGCGTCGGATGGGACAGTATCGCGGTGCAGATGTTGAAGGATGCG
GTGGATGAAGGGGGACAACGGAGGGCGGAGGCGGTGGCCGTGGTGATGCA
GGAAGGGTTGGCGCATATTTGCTTTATCGGACAGTTTCAGACTATCCTAA
AGCAGAAGATTGAGATGTCGGTGCCCAGGAAACGACATGGTGGGGGTGAT
CATGATAAGGGCATGTCGAAATTCTTCCAGGTTACACTCGATACGCTGCT
GCGCCAGCTTGAATTCAACACCAGCTCGGCTTCACTCACCAGCAGCGAGA
CCGTTCGGCCGGTTCTCCTTGCATCGCCAGGCTTCGTGGCCTCCGGCTTC
CAAAAGTACATCCAGTCGCAGGCATCCACTTCGACGCCGGCGCTTAAACG
CCTCCTACCCAGTATTGTGGTTGTACACTCTGCTTCCGGTTATCTGCACT
CGTTAGCGGAAGTCCTGCAGTCCCCAGCTGTGAAAACCATTCTTGCCGAC
ACCAAGTACGCGCGCGAGACAAAGCTCATGGACGACTTCCTCGACCAGCT
CCGCAAAGAAACCAACAAAGCGACGTATGGTCCGCGCGAGGTTGAATTCG
CTGTCGACCAGGGTGCCGTTGGCCGCGGTGGTGGCGTGCTGATCATCTCC
AATCGGCTGTTCAGGTCACAGGACGTGGCGGAGCGCAAACGCTGGGTATC
GCTGGTAGATCGGGTACGGGATGTCGAGGGTGGAGAGGTGCGAGTGCTCA
GCTCCGACCATGAGAGTGGAAGGCGACTTGATGGGCTAGGAGGGGTGGCA
GCCCTGTTGACGTTTCCTATATTGGATGAGGATATAGAAGGGGAGGGGGA
GGTCGAGCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0071025RNA surveillance
GO:0070481nuclear-transcribed mRNA catabolic process, non-stop decay
GO:0070966nuclear-transcribed mRNA catabolic process, no-go decay
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005116KJC3_005116Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005116-T1KJC3_005116-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005116-T1.utr5p1KJC3_005116-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005116-T1.exon1KJC3_005116-T1.exon1Aspergillus niger KJC3exon
KJC3_005116-T1.exon2KJC3_005116-T1.exon2Aspergillus niger KJC3exon
KJC3_005116-T1.exon3KJC3_005116-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005116-T1.cdsKJC3_005116-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005116-T1.utr3p1KJC3_005116-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262NB1
DBxrefInterPro:IPR004405
DBxrefInterPro:IPR038069
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR005141
DBxrefInterPro:IPR005142
DBxrefInterPro:IPR042226
DBxrefInterPro:IPR005140
DBxrefPFAM:PF03465
DBxrefPFAM:PF03464
DBxrefPFAM:PF03463
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1612699..1614977 +
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