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KJC3_005130-T1, KJC3_005130-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005130-T1
Unique NameKJC3_005130-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1659763..1661701+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005130-T1 ID=KJC3_005130-T1|Name=KJC3_005130-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1939bp|location=Sequence derived from alignment at ch4:1659763..1661701+ (Aspergillus niger KJC3)
ATCTATTTACTCTGGAACCACCCATCAAAACACCCGCAAGCGACACTCGA
GAGATGTCTGCGCGGTGGCAGAAATTGCACATATCAAATCGTGCGCCTGC
GCCACCTCTATTTTATAGATACACCCTTTTCAGAGATGGATATGAGCTGT
ACCTAACCGATCTCACGTATATTTGGTCCGAGCGTCCCAACCGCCAGCAT
ATTCTGGGAAGAGCCGTTGAAGAGGATGCGACAATTGACCCCAGCCAAGA
TATAGATCAGTTCAATATACTTCTGGAGAAATTAGGGGAGGCCTTGCGCA
ATGACCCGGGTACCAGCACTGTACTAAGGCGTGGACGGGAGAATGATACT
CTACACCTGACCACTACAACAAGCCTACCGGCCCCACTTGAGCCTCTGAA
GTGGAATTTCTACATGGCTAGAGAGAAACAGCGCTTTTCGACTACTCAAC
TGCTTATCCCGCATATAAAGTCTGAGGCTGCCTGGGAGTTGCGCCAGCGG
GAACTAATCGAAGTTGTTAAACGGAAGGATTGGCTGCTGTCAAAGCTACT
CGATAAGCTTGAAGCCGTCGGGCTTGATCTCAGCACTATCTTCCCTAGTA
TTCCTGGACTCAGGGCCAACCACAAGGGCTCAACACAGTCACAGGCCGCC
AAGTATGTTAGTGGAGCGAGACCTTTCGATGAGGATGCCTGGCTTGAGGA
GAACAACGCGATAACATCTGAGACCGGATTCGCATCCACCATTTTGGAAG
AAACAGAAGATTCTACCCTTGATGATAATCTTCTGCTACTCGAAGATCTC
AGCGCGCCATCAGAAGGATGGTGGAGGAAGATGTCCACCGTTAACAATAA
CACCGAAGCCGTAGATGCCAGGACCCCGGAGGACTCGACGAACATGGACA
CTACGGACGGTGGTTTGGAGACTGAGGATGACTTTGACGATGATGATGAC
GATGATTTTGAGGTACGTACCTTTCCACGCAATGCAGTGCCTTGTATTCA
TATTTCGCATTTCAGCGACAAGAGACCCCCCCGAGACTCAGACCTCAGCC
AAACCACCAAACTCCCCCTTCAGGGCCAGGCGAGGACACAGCAACAGAAA
GTGAAGATGACCTTGAAGATCGAAATGGGGGACCAAGTACAGCGAAGTCT
CCGGCATCACGAAACACTTCCAGGGGCCTTGGAACAATCGGAGGCAACAG
AAAACAGCCCCCACAACCAGAATCGCCTCAAACATCACCAGCATTAGCAG
ATGTCGACGCAGCGATACCAAGACGCAAGACCCCCACAACCCAAGCAGAC
AGCGACCAAACAGCCTCCGAGACAGACGACGACCACGACGACAATCATCC
CTCCCCATCACCCTCACCGCCGCCCTCAAACCGTCAAACAAAGCCCCGCA
AAATAGGTATGATAGGTGGCAAGAAAGCCGAAAAACAAGCCTCCCCACCA
GCGTCACCAAATCCCGAATCATCCAGTAAACTCCAGTCAAAACCCCGCGG
GATTGGCGTCATAGGTGGTAAGGGCAAAGCAAGGCAAGCTTCCCCACCAT
CATCACCGCCACCAGAAGCCGAATCATCGACCAAGGCCCACAGACTAGGA
GTGATAGGCGGCCGGAAGAGAGAAAAACAAGCCGCGTCGTCGCCAGCAGC
TACAGCAACGCAGTCCTCAGGGCCACCATCCCCTGCACCAGCTCTGGACG
AACAACCCGCAGAGCCGGAGAAGGAAGAAACAGAGGAAGAAAAAGCGGAC
AGGAAGCGGGAAGAGCTGAAGAGACAGCTTGAAGCTAAGAGCAAGGCGCC
TGCTAAGAAGAAGCGGAAGTTTTAAGCCACTTTTCTGCTGGAGCTATCTG
TTTATATCCTACCTGAGGGCGGATAGGTACGTGGTTGTCTGATCGGGGGG
ATTTACCACAGCAGTTTCAGGGGGAGGGGAAGGGGGGGG
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Coding sequence (CDS) from alignment at ch4:1659763..1661701+

>KJC3_005130-T1 ID=KJC3_005130-T1|Name=KJC3_005130-T1|organism=Aspergillus niger KJC3|type=CDS|length=3438bp|location=Sequence derived from alignment at ch4:1659763..1661701+ (Aspergillus niger KJC3)
ATGTCTGCGCGGTGGCAGAAATTGCACATATCAAATCGTGCGCCTGCGCC
ACCTCTATTTTATAGATACACCCTTTTCAGAGATGGATATGAGCTGTACC
TAACCGATCTCACGTATATTTGGTCCGAGCGTCCCAACCGCCAGCATATT
CTGGGAAGAGCCGTTGAAGAGGATGCGACAATTGACCCCAGCCAAGATAT
AGATCAGTTCAATATACTTCTGGAGAAATTAGGGGAGGCCTTGCGCAATG
ACCCGGGTACCAGCACTGTACTAAGGCGTGGACGGGAGAATGATACTCTA
CACCTGACCACTACAACAAGCCTACCGGCCCCACTTGAGCCTCTGAAGTG
GAATTTCTACATGGCTAGAGAGAAACAGCGCTTTTCGACTACTCAACTGC
TTATCCCGCATATAAAGTCTGAGGCTGCCTGGGAGTTGCGCCAGCGGGAA
CTAATCGAAGTTGTTAAACGGAAGGATTGGCTGCTGTCAAAGCTACTCGA
TAAGCTTGAAGCCGTCGGGCTTGATCTCAGCACTATCTTCCCTAGTATTC
CTGGACTCAGGGCCAACCACAAGGGCTCAACACAGTCACAGGCCGCCAAG
TATGTTAGTGGAGCGAGACCTTTCGATGAGGATGCCTGGCTTGAGGAGAA
CAACGCGATAACATCTGAGACCGGATTCGCATCCACCATTTTGGAAGAAA
CAGAAGATTCTACCCTTGATGATAATCTTCTGCTACTCGAAGATCTCAGC
GCGCCATCAGAAGGATGGTGGAGGAAGATGTCCACCGTTAACAATAACAC
CGAAGCCGTAGATGCCAGGACCCCGGAGGACTCGACGAACATGGACACTA
CGGACGGTGGTTTGGAGACTGAGGATGACTTTGACGATGATGATGACGAT
GATTTTGAGCGACAAGAGACCCCCCCGAGACTCAGACCTCAGCCAAACCA
CCAAACTCCCCCTTCAGGGCCAGGCGAGGACACAGCAACAGAAAGTGAAG
ATGACCTTGAAGATCGAAATGGGGGACCAAGTACAGCGAAGTCTCCGGCA
TCACGAAACACTTCCAGGGGCCTTGGAACAATCGGAGGCAACAGAAAACA
GCCCCCACAACCAGAATCGCCTCAAACATCACCAGCATTAGCAGATGTCG
ACGCAGCGATACCAAGACGCAAGACCCCCACAACCCAAGCAGACAGCGAC
CAAACAGCCTCCGAGACAGACGACGACCACGACGACAATCATCCCTCCCC
ATCACCCTCACCGCCGCCCTCAAACCGTCAAACAAAGCCCCGCAAAATAG
GTATGATAGGTGGCAAGAAAGCCGAAAAACAAGCCTCCCCACCAGCGTCA
CCAAATCCCGAATCATCCAGTAAACTCCAGTCAAAACCCCGCGGGATTGG
CGTCATAGGTGGTAAGGGCAAAGCAAGGCAAGCTTCCCCACCATCATCAC
CGCCACCAGAAGCCGAATCATCGACCAAGGCCCACAGACTAGGAGTGATA
GGCGGCCGGAAGAGAGAAAAACAAGCCGCGTCGTCGCCAGCAGCTACAGC
AACGCAGTCCTCAGGGCCACCATCCCCTGCACCAGCTCTGGACGAACAAC
CCGCAGAGCCGGAGAAGGAAGAAACAGAGGAAGAAAAAGCGGACAGGAAG
CGGGAAGAGCTGAAGAGACAGCTTGAAGCTAAGAGCAAGGCGCCTGCTAA
GAAGAAGCGGAAGTTTTAAATGTCTGCGCGGTGGCAGAAATTGCACATAT
CAAATCGTGCGCCTGCGCCACCTCTATTTTATAGATACACCCTTTTCAGA
GATGGATATGAGCTGTACCTAACCGATCTCACGTATATTTGGTCCGAGCG
TCCCAACCGCCAGCATATTCTGGGAAGAGCCGTTGAAGAGGATGCGACAA
TTGACCCCAGCCAAGATATAGATCAGTTCAATATACTTCTGGAGAAATTA
GGGGAGGCCTTGCGCAATGACCCGGGTACCAGCACTGTACTAAGGCGTGG
ACGGGAGAATGATACTCTACACCTGACCACTACAACAAGCCTACCGGCCC
CACTTGAGCCTCTGAAGTGGAATTTCTACATGGCTAGAGAGAAACAGCGC
TTTTCGACTACTCAACTGCTTATCCCGCATATAAAGTCTGAGGCTGCCTG
GGAGTTGCGCCAGCGGGAACTAATCGAAGTTGTTAAACGGAAGGATTGGC
TGCTGTCAAAGCTACTCGATAAGCTTGAAGCCGTCGGGCTTGATCTCAGC
ACTATCTTCCCTAGTATTCCTGGACTCAGGGCCAACCACAAGGGCTCAAC
ACAGTCACAGGCCGCCAAGTATGTTAGTGGAGCGAGACCTTTCGATGAGG
ATGCCTGGCTTGAGGAGAACAACGCGATAACATCTGAGACCGGATTCGCA
TCCACCATTTTGGAAGAAACAGAAGATTCTACCCTTGATGATAATCTTCT
GCTACTCGAAGATCTCAGCGCGCCATCAGAAGGATGGTGGAGGAAGATGT
CCACCGTTAACAATAACACCGAAGCCGTAGATGCCAGGACCCCGGAGGAC
TCGACGAACATGGACACTACGGACGGTGGTTTGGAGACTGAGGATGACTT
TGACGATGATGATGACGATGATTTTGAGCGACAAGAGACCCCCCCGAGAC
TCAGACCTCAGCCAAACCACCAAACTCCCCCTTCAGGGCCAGGCGAGGAC
ACAGCAACAGAAAGTGAAGATGACCTTGAAGATCGAAATGGGGGACCAAG
TACAGCGAAGTCTCCGGCATCACGAAACACTTCCAGGGGCCTTGGAACAA
TCGGAGGCAACAGAAAACAGCCCCCACAACCAGAATCGCCTCAAACATCA
CCAGCATTAGCAGATGTCGACGCAGCGATACCAAGACGCAAGACCCCCAC
AACCCAAGCAGACAGCGACCAAACAGCCTCCGAGACAGACGACGACCACG
ACGACAATCATCCCTCCCCATCACCCTCACCGCCGCCCTCAAACCGTCAA
ACAAAGCCCCGCAAAATAGGTATGATAGGTGGCAAGAAAGCCGAAAAACA
AGCCTCCCCACCAGCGTCACCAAATCCCGAATCATCCAGTAAACTCCAGT
CAAAACCCCGCGGGATTGGCGTCATAGGTGGTAAGGGCAAAGCAAGGCAA
GCTTCCCCACCATCATCACCGCCACCAGAAGCCGAATCATCGACCAAGGC
CCACAGACTAGGAGTGATAGGCGGCCGGAAGAGAGAAAAACAAGCCGCGT
CGTCGCCAGCAGCTACAGCAACGCAGTCCTCAGGGCCACCATCCCCTGCA
CCAGCTCTGGACGAACAACCCGCAGAGCCGGAGAAGGAAGAAACAGAGGA
AGAAAAAGCGGACAGGAAGCGGGAAGAGCTGAAGAGACAGCTTGAAGCTA
AGAGCAAGGCGCCTGCTAAGAAGAAGCGGAAGTTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006302double-strand break repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005130KJC3_005130Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005130-T1.utr5p1KJC3_005130-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005130-T1.exon1KJC3_005130-T1.exon1Aspergillus niger KJC3exon
KJC3_005130-T1.exon2KJC3_005130-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005130-T1.cdsKJC3_005130-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005130-T1.utr3p1KJC3_005130-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005130-T1KJC3_005130-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015381
DBxrefPFAM:PF09302
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1659763..1661701 +
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