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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1744964..1747029+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005157-T1 ID=KJC3_005157-T1|Name=KJC3_005157-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2066bp|location=Sequence derived from alignment at ch4:1744964..1747029+ (Aspergillus niger KJC3)
ATCCATTCTCCCCTGGCTTTTCGGGCTCAGACTCTTACACGAGCATCTGC
GTCCTTGTCTGCATGATATACAATTCCCAATATTGATTGCTCCTGATGTC
CGAACGGATTTCCCGTCCGTCCAGTCCCTACTTGGAGCCCCCGAGGAAGA
GCGTCGAGTTGGAAGACCCGGGGGCTCAGGATTCCGGTAAGCAGCACAGT
CTAGCACTGGGAATCCAATGGTTCGGAATTAACACCTCATCTACAGCTAC
GAACAGTGACGACGAACATTTTTCAGACGCCAGCGAGGGCCACCAACGCC
CTGAATCCCACCCGCCGTCCGGCCGAGCTTCCCCTATCCCCTTAACCCGT
GTGGAGAAGGTCGACGAGGAACCCTCGCATGGGGAGGTGCCTGGGACTGC
TGCGTACGAAATAAGGGACCAGGATGCCGTTCCCGACCAGATTGAAGTTA
TCCCGGAGGGTTCACGCAGCCGAAGCGCTTCAGCGAGCGGCGAACGGCCT
GTGACTCCGACATCAATTCCGCGGACAGTGGTTGAGAAAGTCGACTTAGA
TCAACCCAGTCATGGCGATATTCCCGGCACCCCAGCGTATGAAAAAAGAA
AGGCAGATGCGGTACCCGATGTGGTGAAGAAGGCGTCGGATTCAGATTCA
GATGAACCGTCCCCTATACCGGGGTCCTTCGAGGCCAGTGCGGCCGAGAC
ACCTGTTCCCGAAACGCTGCTCTCCCGCGTGGAATCCAACGAGGACGATG
TCACAGAAGAAGGTCCTGTTGCTCATCAGCCAAAGCCGATTGATCCGGAG
CCAGACCACACCGAGACCGTCCCCGATGCACCAGGTAAGCCGGATTTCGG
TTGAATTACGACATAAGTTTCAGGGACGATTGACCAATTCAGATTCGCCT
GCAAGCCATCGAAGTCACACCCGCCGAGGATCGTCAGTAAACGACGCCGC
AGCCGTCGACCCGGCCGGTGCAGACGAGTTTGACGATTTCGCCGAGGAGC
AGGAAGACGACGACTTTGGAGACTTTGACGACTTCGACGATGGCTTCCAA
GAGCCTATGGAGGCTGTCGAGGATGAACCAGCAGAAATACAGCCCTCGCA
GCCTCCCACACCTCCTTCAGTTGTATGTACACCCTCAAATATCAGTATAC
AGCGTAAGAAATGCTAAACCGTTTCCAGCCACCCCTCCTCGACCTTGACG
CCATTCCCTCCCTTGCAGACCTTCACACCACCCTCTCCGACCCCCTCGAC
CGCCTCTTCCCCAGCACCAAAGACACCGTCAGCCTGCAGCCCCTTGACCC
GATCCCCAACCCCACCGCCATCTTCAGCACCGAGCGCTCCCTCTCCCTTT
GGTCTCAGCTCGTAGCCCCTCCCCCACTCCAGCCCCAAAACTGGGTGAAA
TCCCGCATCCGGCGACTCTTCCTCGTCTCACTTGGCGTGCCCGTCGACCT
CGACGAGATTCTCCCAGCCTCTAAGCAAAAGAAACTCATCCTCCCCTCTG
TCAACCTCGACGACACACGTCGCTCCTCCACCCCACCAATCGCACACTCT
CGCTCCCAAAGCCTAGCAGCCAAGCGCGACAGCACACAAAGCGGCCCCGG
CAGCCCAGGCCCCAACCAACAATCTCGAACCCGAACTTCTCGCCGAAGAG
AACCCTCCCCACCACCTGAATTGGATCTCCCGGCCGTACACCGCCTGTGC
GCAACCACAGACGCAGCTCTAGACGGCCTAACGGACAAAGAACTCCGCGG
ACATGTCCAGGAACTCGAGTCAGCAACTTTACGCGCAAGCTCCGTACTAG
AGTACTGGTTGAAACGATTGGACGGGCTCATCAGTGAAAAGGAGGCGTTT
GAAGGCGTCATAGAAAATTTGGTAAGCCATGCTAGACGAGTCCGGAAGTG
AGTGGGTGTTCTTCTTATATTATCCATTCCTCTCATTTCTATGCTGGCTG
GCATGATCTCGACTGTTATTGTGATGATTGTGCGATGTGATGTGATGTCT
TGTGATGAGATGTTGATAGATCGATTATAAATATGACTATTAATTTAATG
ATTATACATATGCTAC back to topCoding sequence (CDS) from alignment at ch4:1744964..1747029+ >KJC3_005157-T1 ID=KJC3_005157-T1|Name=KJC3_005157-T1|organism=Aspergillus niger KJC3|type=CDS|length=6528bp|location=Sequence derived from alignment at ch4:1744964..1747029+ (Aspergillus niger KJC3)
ATGTCCGAACGGATTTCCCGTCCGTCCAGTCCCTACTTGGAGCCCCCGAG
GAAGAGCGTCGAGTTGGAAGACCCGGGGGCTCAGGATTCCGCTACGAACA
GTGACGACGAACATTTTTCAGACGCCAGCGAGGGCCACCAACGCCCTGAA
TCCCACCCGCCGTCCGGCCGAGCTTCCCCTATCCCCTTAACCCGTGTGGA
GAAGGTCGACGAGGAACCCTCGCATGGGGAGGTGCCTGGGACTGCTGCGT
ACGAAATAAGGGACCAGGATGCCGTTCCCGACCAGATTGAAGTTATCCCG
GAGGGTTCACGCAGCCGAAGCGCTTCAGCGAGCGGCGAACGGCCTGTGAC
TCCGACATCAATTCCGCGGACAGTGGTTGAGAAAGTCGACTTAGATCAAC
CCAGTCATGGCGATATTCCCGGCACCCCAGCGTATGAAAAAAGAAAGGCA
GATGCGGTACCCGATGTGGTGAAGAAGGCGTCGGATTCAGATTCAGATGA
ACCGTCCCCTATACCGGGGTCCTTCGAGGCCAGTGCGGCCGAGACACCTG
TTCCCGAAACGCTGCTCTCCCGCGTGGAATCCAACGAGGACGATGTCACA
GAAGAAGGTCCTGTTGCTCATCAGCCAAAGCCGATTGATCCGGAGCCAGA
CCACACCGAGACCGTCCCCGATGCACCAGATTCGCCTGCAAGCCATCGAA
GTCACACCCGCCGAGGATCGTCAGTAAACGACGCCGCAGCCGTCGACCCG
GCCGGTGCAGACGAGTTTGACGATTTCGCCGAGGAGCAGGAAGACGACGA
CTTTGGAGACTTTGACGACTTCGACGATGGCTTCCAAGAGCCTATGGAGG
CTGTCGAGGATGAACCAGCAGAAATACAGCCCTCGCAGCCTCCCACACCT
CCTTCAGTTCCACCCCTCCTCGACCTTGACGCCATTCCCTCCCTTGCAGA
CCTTCACACCACCCTCTCCGACCCCCTCGACCGCCTCTTCCCCAGCACCA
AAGACACCGTCAGCCTGCAGCCCCTTGACCCGATCCCCAACCCCACCGCC
ATCTTCAGCACCGAGCGCTCCCTCTCCCTTTGGTCTCAGCTCGTAGCCCC
TCCCCCACTCCAGCCCCAAAACTGGGTGAAATCCCGCATCCGGCGACTCT
TCCTCGTCTCACTTGGCGTGCCCGTCGACCTCGACGAGATTCTCCCAGCC
TCTAAGCAAAAGAAACTCATCCTCCCCTCTGTCAACCTCGACGACACACG
TCGCTCCTCCACCCCACCAATCGCACACTCTCGCTCCCAAAGCCTAGCAG
CCAAGCGCGACAGCACACAAAGCGGCCCCGGCAGCCCAGGCCCCAACCAA
CAATCTCGAACCCGAACTTCTCGCCGAAGAGAACCCTCCCCACCACCTGA
ATTGGATCTCCCGGCCGTACACCGCCTGTGCGCAACCACAGACGCAGCTC
TAGACGGCCTAACGGACAAAGAACTCCGCGGACATGTCCAGGAACTCGAG
TCAGCAACTTTACGCGCAAGCTCCGTACTAGAGTACTGGTTGAAACGATT
GGACGGGCTCATCAGTGAAAAGGAGGCGTTTGAAGGCGTCATAGAAAATT
TGGTAAGCCATGCTAGACGAGTCCGGAAGTGAATGTCCGAACGGATTTCC
CGTCCGTCCAGTCCCTACTTGGAGCCCCCGAGGAAGAGCGTCGAGTTGGA
AGACCCGGGGGCTCAGGATTCCGCTACGAACAGTGACGACGAACATTTTT
CAGACGCCAGCGAGGGCCACCAACGCCCTGAATCCCACCCGCCGTCCGGC
CGAGCTTCCCCTATCCCCTTAACCCGTGTGGAGAAGGTCGACGAGGAACC
CTCGCATGGGGAGGTGCCTGGGACTGCTGCGTACGAAATAAGGGACCAGG
ATGCCGTTCCCGACCAGATTGAAGTTATCCCGGAGGGTTCACGCAGCCGA
AGCGCTTCAGCGAGCGGCGAACGGCCTGTGACTCCGACATCAATTCCGCG
GACAGTGGTTGAGAAAGTCGACTTAGATCAACCCAGTCATGGCGATATTC
CCGGCACCCCAGCGTATGAAAAAAGAAAGGCAGATGCGGTACCCGATGTG
GTGAAGAAGGCGTCGGATTCAGATTCAGATGAACCGTCCCCTATACCGGG
GTCCTTCGAGGCCAGTGCGGCCGAGACACCTGTTCCCGAAACGCTGCTCT
CCCGCGTGGAATCCAACGAGGACGATGTCACAGAAGAAGGTCCTGTTGCT
CATCAGCCAAAGCCGATTGATCCGGAGCCAGACCACACCGAGACCGTCCC
CGATGCACCAGATTCGCCTGCAAGCCATCGAAGTCACACCCGCCGAGGAT
CGTCAGTAAACGACGCCGCAGCCGTCGACCCGGCCGGTGCAGACGAGTTT
GACGATTTCGCCGAGGAGCAGGAAGACGACGACTTTGGAGACTTTGACGA
CTTCGACGATGGCTTCCAAGAGCCTATGGAGGCTGTCGAGGATGAACCAG
CAGAAATACAGCCCTCGCAGCCTCCCACACCTCCTTCAGTTCCACCCCTC
CTCGACCTTGACGCCATTCCCTCCCTTGCAGACCTTCACACCACCCTCTC
CGACCCCCTCGACCGCCTCTTCCCCAGCACCAAAGACACCGTCAGCCTGC
AGCCCCTTGACCCGATCCCCAACCCCACCGCCATCTTCAGCACCGAGCGC
TCCCTCTCCCTTTGGTCTCAGCTCGTAGCCCCTCCCCCACTCCAGCCCCA
AAACTGGGTGAAATCCCGCATCCGGCGACTCTTCCTCGTCTCACTTGGCG
TGCCCGTCGACCTCGACGAGATTCTCCCAGCCTCTAAGCAAAAGAAACTC
ATCCTCCCCTCTGTCAACCTCGACGACACACGTCGCTCCTCCACCCCACC
AATCGCACACTCTCGCTCCCAAAGCCTAGCAGCCAAGCGCGACAGCACAC
AAAGCGGCCCCGGCAGCCCAGGCCCCAACCAACAATCTCGAACCCGAACT
TCTCGCCGAAGAGAACCCTCCCCACCACCTGAATTGGATCTCCCGGCCGT
ACACCGCCTGTGCGCAACCACAGACGCAGCTCTAGACGGCCTAACGGACA
AAGAACTCCGCGGACATGTCCAGGAACTCGAGTCAGCAACTTTACGCGCA
AGCTCCGTACTAGAGTACTGGTTGAAACGATTGGACGGGCTCATCAGTGA
AAAGGAGGCGTTTGAAGGCGTCATAGAAAATTTGGTAAGCCATGCTAGAC
GAGTCCGGAAGTGAATGTCCGAACGGATTTCCCGTCCGTCCAGTCCCTAC
TTGGAGCCCCCGAGGAAGAGCGTCGAGTTGGAAGACCCGGGGGCTCAGGA
TTCCGCTACGAACAGTGACGACGAACATTTTTCAGACGCCAGCGAGGGCC
ACCAACGCCCTGAATCCCACCCGCCGTCCGGCCGAGCTTCCCCTATCCCC
TTAACCCGTGTGGAGAAGGTCGACGAGGAACCCTCGCATGGGGAGGTGCC
TGGGACTGCTGCGTACGAAATAAGGGACCAGGATGCCGTTCCCGACCAGA
TTGAAGTTATCCCGGAGGGTTCACGCAGCCGAAGCGCTTCAGCGAGCGGC
GAACGGCCTGTGACTCCGACATCAATTCCGCGGACAGTGGTTGAGAAAGT
CGACTTAGATCAACCCAGTCATGGCGATATTCCCGGCACCCCAGCGTATG
AAAAAAGAAAGGCAGATGCGGTACCCGATGTGGTGAAGAAGGCGTCGGAT
TCAGATTCAGATGAACCGTCCCCTATACCGGGGTCCTTCGAGGCCAGTGC
GGCCGAGACACCTGTTCCCGAAACGCTGCTCTCCCGCGTGGAATCCAACG
AGGACGATGTCACAGAAGAAGGTCCTGTTGCTCATCAGCCAAAGCCGATT
GATCCGGAGCCAGACCACACCGAGACCGTCCCCGATGCACCAGATTCGCC
TGCAAGCCATCGAAGTCACACCCGCCGAGGATCGTCAGTAAACGACGCCG
CAGCCGTCGACCCGGCCGGTGCAGACGAGTTTGACGATTTCGCCGAGGAG
CAGGAAGACGACGACTTTGGAGACTTTGACGACTTCGACGATGGCTTCCA
AGAGCCTATGGAGGCTGTCGAGGATGAACCAGCAGAAATACAGCCCTCGC
AGCCTCCCACACCTCCTTCAGTTCCACCCCTCCTCGACCTTGACGCCATT
CCCTCCCTTGCAGACCTTCACACCACCCTCTCCGACCCCCTCGACCGCCT
CTTCCCCAGCACCAAAGACACCGTCAGCCTGCAGCCCCTTGACCCGATCC
CCAACCCCACCGCCATCTTCAGCACCGAGCGCTCCCTCTCCCTTTGGTCT
CAGCTCGTAGCCCCTCCCCCACTCCAGCCCCAAAACTGGGTGAAATCCCG
CATCCGGCGACTCTTCCTCGTCTCACTTGGCGTGCCCGTCGACCTCGACG
AGATTCTCCCAGCCTCTAAGCAAAAGAAACTCATCCTCCCCTCTGTCAAC
CTCGACGACACACGTCGCTCCTCCACCCCACCAATCGCACACTCTCGCTC
CCAAAGCCTAGCAGCCAAGCGCGACAGCACACAAAGCGGCCCCGGCAGCC
CAGGCCCCAACCAACAATCTCGAACCCGAACTTCTCGCCGAAGAGAACCC
TCCCCACCACCTGAATTGGATCTCCCGGCCGTACACCGCCTGTGCGCAAC
CACAGACGCAGCTCTAGACGGCCTAACGGACAAAGAACTCCGCGGACATG
TCCAGGAACTCGAGTCAGCAACTTTACGCGCAAGCTCCGTACTAGAGTAC
TGGTTGAAACGATTGGACGGGCTCATCAGTGAAAAGGAGGCGTTTGAAGG
CGTCATAGAAAATTTGGTAAGCCATGCTAGACGAGTCCGGAAGTGAATGT
CCGAACGGATTTCCCGTCCGTCCAGTCCCTACTTGGAGCCCCCGAGGAAG
AGCGTCGAGTTGGAAGACCCGGGGGCTCAGGATTCCGCTACGAACAGTGA
CGACGAACATTTTTCAGACGCCAGCGAGGGCCACCAACGCCCTGAATCCC
ACCCGCCGTCCGGCCGAGCTTCCCCTATCCCCTTAACCCGTGTGGAGAAG
GTCGACGAGGAACCCTCGCATGGGGAGGTGCCTGGGACTGCTGCGTACGA
AATAAGGGACCAGGATGCCGTTCCCGACCAGATTGAAGTTATCCCGGAGG
GTTCACGCAGCCGAAGCGCTTCAGCGAGCGGCGAACGGCCTGTGACTCCG
ACATCAATTCCGCGGACAGTGGTTGAGAAAGTCGACTTAGATCAACCCAG
TCATGGCGATATTCCCGGCACCCCAGCGTATGAAAAAAGAAAGGCAGATG
CGGTACCCGATGTGGTGAAGAAGGCGTCGGATTCAGATTCAGATGAACCG
TCCCCTATACCGGGGTCCTTCGAGGCCAGTGCGGCCGAGACACCTGTTCC
CGAAACGCTGCTCTCCCGCGTGGAATCCAACGAGGACGATGTCACAGAAG
AAGGTCCTGTTGCTCATCAGCCAAAGCCGATTGATCCGGAGCCAGACCAC
ACCGAGACCGTCCCCGATGCACCAGATTCGCCTGCAAGCCATCGAAGTCA
CACCCGCCGAGGATCGTCAGTAAACGACGCCGCAGCCGTCGACCCGGCCG
GTGCAGACGAGTTTGACGATTTCGCCGAGGAGCAGGAAGACGACGACTTT
GGAGACTTTGACGACTTCGACGATGGCTTCCAAGAGCCTATGGAGGCTGT
CGAGGATGAACCAGCAGAAATACAGCCCTCGCAGCCTCCCACACCTCCTT
CAGTTCCACCCCTCCTCGACCTTGACGCCATTCCCTCCCTTGCAGACCTT
CACACCACCCTCTCCGACCCCCTCGACCGCCTCTTCCCCAGCACCAAAGA
CACCGTCAGCCTGCAGCCCCTTGACCCGATCCCCAACCCCACCGCCATCT
TCAGCACCGAGCGCTCCCTCTCCCTTTGGTCTCAGCTCGTAGCCCCTCCC
CCACTCCAGCCCCAAAACTGGGTGAAATCCCGCATCCGGCGACTCTTCCT
CGTCTCACTTGGCGTGCCCGTCGACCTCGACGAGATTCTCCCAGCCTCTA
AGCAAAAGAAACTCATCCTCCCCTCTGTCAACCTCGACGACACACGTCGC
TCCTCCACCCCACCAATCGCACACTCTCGCTCCCAAAGCCTAGCAGCCAA
GCGCGACAGCACACAAAGCGGCCCCGGCAGCCCAGGCCCCAACCAACAAT
CTCGAACCCGAACTTCTCGCCGAAGAGAACCCTCCCCACCACCTGAATTG
GATCTCCCGGCCGTACACCGCCTGTGCGCAACCACAGACGCAGCTCTAGA
CGGCCTAACGGACAAAGAACTCCGCGGACATGTCCAGGAACTCGAGTCAG
CAACTTTACGCGCAAGCTCCGTACTAGAGTACTGGTTGAAACGATTGGAC
GGGCTCATCAGTGAAAAGGAGGCGTTTGAAGGCGTCATAGAAAATTTGGT
AAGCCATGCTAGACGAGTCCGGAAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005157-T1.utr5p1 | KJC3_005157-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005157-T1.utr3p1 | KJC3_005157-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR031355 |
| DBxref | PFAM:PF17104 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1744964..1747029 + |
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