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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1757570..1759613+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005160-T1 ID=KJC3_005160-T1|Name=KJC3_005160-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2044bp|location=Sequence derived from alignment at ch4:1757570..1759613+ (Aspergillus niger KJC3)
GGATCGGCGGGCCGCGTCACTGATCACCGCCGTTTGCTCCTCGCTTTTTC
TACTTCCTACAATCCACACGATAATGGCTTGATTGAGCGCGTTCAACCCC
ATTTACTCTCCTTGGTTTATTGTTATTCTATTCTTTCTTTTATTCCTATT
CCGGTCACTCTTTTTATTCATCGATGCGGTTCTCCCCATGTCCCTCCTCC
GCCTTCTCCTCCGCCAGGCGCTGGCCATCCTCCTCCCGCTGGCCCTGACC
AGCACTGTCTATCTCTATCTCTACCCCGTCTTTCACGGCTGCGCATTCCC
TCTGCCAGAGGAATCTATCTCCTCTCATCTCTCAATCCCACACTTCTCTC
CATCTTTCCTCTTCACCCTCCGCCACCACCTCTCCTCCTCGCCTCCTCCA
TCTGCGACCTCGCCCATCTTCCGCCTCCTCGTTTTGGCCGACCCCCAACT
AGAAGGCGACACCTCCCTCCCCAAACCTCACGATCAACTCCCCGCCAAAC
TCTCCAACTACTATGCCGACCTGTCCTCCACAATCCGCACGAAACCCCCA
TCCGCCACCCTCTACACCCTCCGCTCCGTCCTCCGCTCCCTCATCTCCAC
CGACCTCCCCCGCGCATTTCGCGCCGCGCGCAAACGCCTCGACCTGCTCG
GAAATGACTACTACCTGGCGCATATCTACCGCACGATGCACTGGTGGAGT
GCACCGTCGCACGTCACCGTGCTGGGCGATCTAGTAGGGAGCCAATGGGT
GAGCGATGGGGAGTTTGAGGAACGGGGTCGGCGATACTGGAAACGAGTGT
TCCGCGGTGGTGTGCGGGTGGATGATGAGATTACCGGGGAAATGGGGACG
GAGGTGTTGGGAACTGATAACGGGGAGTGGGAAAGGAGGGTCGTGAACGT
CGTGGGGAACCACGATGTCGGGTATGCAGGAGATGCGAGTCCATCGAGGA
TAGAGAGGTTCGAGAGGGTGTTTGGAAGGGGAGATTGGGATGTTAAATTC
ACTCTACCTCCAGGAGAAGATAAAGGGGGAGAAGAAACAGTTCCAACAAT
CCACCTCATCAATCTCAACAGTCTTGTCCTGGATACCCCCGCCCTGAGCC
CTGAAGTCCAATCAGCCACATACGAATACCTAAACGGTCTATTGGACGAG
CGAAGCCCATCTATTACTTCATCTCCGCGCGGGCAAACATTCACTCTCCT
TCTAACCCACCTCCCCCTCCACAAGAAAGAAGGAATCTGCACCGACGCTC
CCTTCTTCGCCTTCCACGATGACGATGACTCCAAGGGTGACGCCGCCGGC
AACCCCCGCTTCTACGCCGGCGGTCTCAAAGAGCAGAACCACCTGAGCCA
GTACGCCAGCGCTAATGCCGTGCTCGAGGGCATTTTTGGGATGAGTGGGG
ACGACACCGTCCCCGGAAACGGTTGGGGAAGGAAGGGCCTCATTCTTACA
GGCCATGATCATACGGGCTGTGATGTGGTGCATTTCGTGAATCGCACTGT
TTATGCTGCTGAGGCAGATGATGAAAAGAATGATGATGAAACGCGTGACT
GGCAATGGGATGCCGTGCGCTATAAGACTCAGTATGGCACCACAAGAGAA
GGGGACCTAGGCGTCCCCGCCATACGGGAGGTGACTATGCGCTCCATGAT
GGGAGAATACGGAGGCTATGCTGGGCTCCTATCGGTGTGGTTCACCGGCG
CAGAGTGGAAGTATGAGATCCAGATGTGCGCAGCGGGCGTGCAGCATCTT
TGGTGGGCGGTCCATGTAATTGATGTGATTACTTTCGGGTTGATGGTACT
GTATATCGGATCGGGTATTATTGGAGCTGGTATCTCTGCTGGGAAGGATA
CCAAGGCGGAGAAGAAGATCAAAAAGCAATAACTTCATAGTATAGTCACA
GCCAACTATATAGATCAACTGATCAATCAATCAATATTCATAACGACGTA
CATCTACAATTACATCATGAGACAAAAAAGAAGAAAGTGGACAGGTTTAA
ATTTTTTATGAATCCTTTTCATTTTTAGAATGTTCTTAGGTCAT back to topCoding sequence (CDS) from alignment at ch4:1757570..1759613+ >KJC3_005160-T1 ID=KJC3_005160-T1|Name=KJC3_005160-T1|organism=Aspergillus niger KJC3|type=CDS|length=1695bp|location=Sequence derived from alignment at ch4:1757570..1759613+ (Aspergillus niger KJC3)
ATGTCCCTCCTCCGCCTTCTCCTCCGCCAGGCGCTGGCCATCCTCCTCCC
GCTGGCCCTGACCAGCACTGTCTATCTCTATCTCTACCCCGTCTTTCACG
GCTGCGCATTCCCTCTGCCAGAGGAATCTATCTCCTCTCATCTCTCAATC
CCACACTTCTCTCCATCTTTCCTCTTCACCCTCCGCCACCACCTCTCCTC
CTCGCCTCCTCCATCTGCGACCTCGCCCATCTTCCGCCTCCTCGTTTTGG
CCGACCCCCAACTAGAAGGCGACACCTCCCTCCCCAAACCTCACGATCAA
CTCCCCGCCAAACTCTCCAACTACTATGCCGACCTGTCCTCCACAATCCG
CACGAAACCCCCATCCGCCACCCTCTACACCCTCCGCTCCGTCCTCCGCT
CCCTCATCTCCACCGACCTCCCCCGCGCATTTCGCGCCGCGCGCAAACGC
CTCGACCTGCTCGGAAATGACTACTACCTGGCGCATATCTACCGCACGAT
GCACTGGTGGAGTGCACCGTCGCACGTCACCGTGCTGGGCGATCTAGTAG
GGAGCCAATGGGTGAGCGATGGGGAGTTTGAGGAACGGGGTCGGCGATAC
TGGAAACGAGTGTTCCGCGGTGGTGTGCGGGTGGATGATGAGATTACCGG
GGAAATGGGGACGGAGGTGTTGGGAACTGATAACGGGGAGTGGGAAAGGA
GGGTCGTGAACGTCGTGGGGAACCACGATGTCGGGTATGCAGGAGATGCG
AGTCCATCGAGGATAGAGAGGTTCGAGAGGGTGTTTGGAAGGGGAGATTG
GGATGTTAAATTCACTCTACCTCCAGGAGAAGATAAAGGGGGAGAAGAAA
CAGTTCCAACAATCCACCTCATCAATCTCAACAGTCTTGTCCTGGATACC
CCCGCCCTGAGCCCTGAAGTCCAATCAGCCACATACGAATACCTAAACGG
TCTATTGGACGAGCGAAGCCCATCTATTACTTCATCTCCGCGCGGGCAAA
CATTCACTCTCCTTCTAACCCACCTCCCCCTCCACAAGAAAGAAGGAATC
TGCACCGACGCTCCCTTCTTCGCCTTCCACGATGACGATGACTCCAAGGG
TGACGCCGCCGGCAACCCCCGCTTCTACGCCGGCGGTCTCAAAGAGCAGA
ACCACCTGAGCCAGTACGCCAGCGCTAATGCCGTGCTCGAGGGCATTTTT
GGGATGAGTGGGGACGACACCGTCCCCGGAAACGGTTGGGGAAGGAAGGG
CCTCATTCTTACAGGCCATGATCATACGGGCTGTGATGTGGTGCATTTCG
TGAATCGCACTGTTTATGCTGCTGAGGCAGATGATGAAAAGAATGATGAT
GAAACGCGTGACTGGCAATGGGATGCCGTGCGCTATAAGACTCAGTATGG
CACCACAAGAGAAGGGGACCTAGGCGTCCCCGCCATACGGGAGGTGACTA
TGCGCTCCATGATGGGAGAATACGGAGGCTATGCTGGGCTCCTATCGGTG
TGGTTCACCGGCGCAGAGTGGAAGTATGAGATCCAGATGTGCGCAGCGGG
CGTGCAGCATCTTTGGTGGGCGGTCCATGTAATTGATGTGATTACTTTCG
GGTTGATGGTACTGTATATCGGATCGGGTATTATTGGAGCTGGTATCTCT
GCTGGGAAGGATACCAAGGCGGAGAAGAAGATCAAAAAGCAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005160-T1.utr5p1 | KJC3_005160-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005160-T1.utr3p1 | KJC3_005160-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1757570..1759613 + |
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