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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1767254..1769393+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005165-T1 ID=KJC3_005165-T1|Name=KJC3_005165-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2140bp|location=Sequence derived from alignment at ch4:1767254..1769393+ (Aspergillus niger KJC3)
CGATCATCCACTTGCTTCTTGTTTCTTGATTGTTCTTCACTTCACCCCAA
CCGTGCTGTTTTACCTCCCTCGGTGTCGGTGACCATTCTGTTCCGGCGTG
TGTATTCCTCATCCTCTCCGGTCCATCTATAGATGCCCTTTACACTTTCA
TAATGCTTAGTCGTGCCGTACTGCCTCTGACGAGGCCGAACGTCCTCACC
TCGACCGTTCGAGCTTCAACTATTTCCGTCGCCCACTCGCGCTGGTATGC
GAAGTCCACCAAGCCCAAGACTCCCTACAAGCTTCCTCAGTCCGTCAAGT
CTGCCAATTCAGAACAGTCGCCCAAGGCTCCCTCTCAGAACGACTACTCC
GCGGAGCAGGCCGAATTCGATACCAAGGCTGCGCCGGCCACCGAAGCCGT
GAGTTTGATGACGACGCTGATAATCTCAACACATCTTCTGACACTTTTCA
TTTTCAGTCTGAGACCGGTTCTACAGCTCCCCAAAACTATGCTCCTCAAA
AACCCCTGCCCGATCTCACCCAGGGCATTCCCTCCACCCTTGCCGCAGAA
TTGGAAGCCGCCTCGAAGAACCGCGGATCAAGCAAGCTAAACCTCACAGA
GGACCCGTCGCGTGCGGAAGATTACGATGATGGTGGCCGTGATATTCCCA
ATTACGAATCCTCCCTCGATCGCAAGCGCGCCCGTATGGCCAACCTGATG
TATGTCCTGTTCCTGCTGGCAGGTGCTGGTGGTGTGGCCTATCTGGGCCG
CAACTGGGAGACCGAGGAGGAAGCGAAGGCCCACCCCGACGTGCCATCGG
GCTGGGGCTTCGGACTGATGTACAATCGTGCCAAGGCCCGCTTGGGCGAT
ATCACCAGCTACTACAAGGACCCTGCTTTCCCCAAGCTGCTGCCCGATGA
GGACCCCAACATGCGTCAGCCTTACACCCTTGTGCTGAGTCTGGAGGATC
TCCTGGTGCACAGCGAGTGGAGCCGTGAGCATGGATGGCGTGTGGCCAAG
CGTCCGGGTGTCGACTACTTCCTCCGCTACCTCAACCAGTACTACGAACT
CGTCCTCTTCACCAGTGTGCCCAGCATGATGGCCGATCAGGTGCTCCGGA
AGCTTGACCCCTACCGCATCATCCGCTGGCCCTTGTTCCGTGAAGCCACC
AAGTACAAGGATGGAGAGTACATCAAGGTATGTCACTATTGGCTGTACAT
AGCTCCCAGTCATGACTAACCCAGACAACCAGGACCTGTCCTACCTCAAC
CGTGATCTGTCCAAGGTGATTTTGATTGACACCAAGGAGGAGCACGCCCG
CCTGCAGCCCGAAAACGCCGTCATTCTTGAGAAGTGGCTCGGCGACTCCA
AGGACAAGACCCTCGTCGGCATGATTCCCTTCCTCGAATACATTGCCGGT
ATGGGCGTCGAAGACGTGCGTCCCGTCATCAAGTCCTTCGAGGGCACCCA
GATCCCCGTGGAATTCGCCAAGCGTGAGAAGGCCATGCGTGAGCGCTTTG
AGAAGGAGCTGGCTGAGGAGCAGAAGAAGCGCCCCCGCAGTGGTCTGGGC
AGCTTCGCCTCTGCCCTGGGCCTGAAGTCCACCCGCACCCTGGACGGCGA
GCAGAGCCCCTCGGAGGGCTTGGCCCAGGGTAAGATGCTGTGGGACCAGA
TCCGCGAGCGTGGCCAGAAGAACTACGAGATGATTGAGAAGGAGATCCGT
GAGAACGGCGAGAAGTGGCTGGCCGAGATGGCCGCGGAGGAGGAGAAGGC
CCGTCAGGAGCAAATGGCCATGATGAAGGGCTCTTTCACCGGCATGTTCG
GTGCTGGTCCTAAGCAGTAAATTCTTCTTGAGCGATGACGCGGCGGGGCG
CATAAAGCCCTCGCTCGCAATGACCTTCTCTTCTCTCTTCCGCTGTTTAC
TTCCCAAAAAAAGAAATTTATTGGGTTATTTAATGTATATCCGAGATGTC
ATCTGCTAGATGGTCTCGGTATGTGGGGTTCACATTAGAGGGGTGTCTTT
TCTTTTTTACCTTTTCGTTGGCTCTTGCGCGATTCATCACGGGTTTTCAT
CTCCGTTGTAAAATAGCATTTGGTTGTGTATTTGGTTTTGCGGTGTATAA
ATTGATAAATTCTAATGAAGTCAAAAGAAGTTCATTGTCC back to topCoding sequence (CDS) from alignment at ch4:1767254..1769393+ >KJC3_005165-T1 ID=KJC3_005165-T1|Name=KJC3_005165-T1|organism=Aspergillus niger KJC3|type=CDS|length=4662bp|location=Sequence derived from alignment at ch4:1767254..1769393+ (Aspergillus niger KJC3)
ATGCTTAGTCGTGCCGTACTGCCTCTGACGAGGCCGAACGTCCTCACCTC
GACCGTTCGAGCTTCAACTATTTCCGTCGCCCACTCGCGCTGGTATGCGA
AGTCCACCAAGCCCAAGACTCCCTACAAGCTTCCTCAGTCCGTCAAGTCT
GCCAATTCAGAACAGTCGCCCAAGGCTCCCTCTCAGAACGACTACTCCGC
GGAGCAGGCCGAATTCGATACCAAGGCTGCGCCGGCCACCGAAGCCTCTG
AGACCGGTTCTACAGCTCCCCAAAACTATGCTCCTCAAAAACCCCTGCCC
GATCTCACCCAGGGCATTCCCTCCACCCTTGCCGCAGAATTGGAAGCCGC
CTCGAAGAACCGCGGATCAAGCAAGCTAAACCTCACAGAGGACCCGTCGC
GTGCGGAAGATTACGATGATGGTGGCCGTGATATTCCCAATTACGAATCC
TCCCTCGATCGCAAGCGCGCCCGTATGGCCAACCTGATGTATGTCCTGTT
CCTGCTGGCAGGTGCTGGTGGTGTGGCCTATCTGGGCCGCAACTGGGAGA
CCGAGGAGGAAGCGAAGGCCCACCCCGACGTGCCATCGGGCTGGGGCTTC
GGACTGATGTACAATCGTGCCAAGGCCCGCTTGGGCGATATCACCAGCTA
CTACAAGGACCCTGCTTTCCCCAAGCTGCTGCCCGATGAGGACCCCAACA
TGCGTCAGCCTTACACCCTTGTGCTGAGTCTGGAGGATCTCCTGGTGCAC
AGCGAGTGGAGCCGTGAGCATGGATGGCGTGTGGCCAAGCGTCCGGGTGT
CGACTACTTCCTCCGCTACCTCAACCAGTACTACGAACTCGTCCTCTTCA
CCAGTGTGCCCAGCATGATGGCCGATCAGGTGCTCCGGAAGCTTGACCCC
TACCGCATCATCCGCTGGCCCTTGTTCCGTGAAGCCACCAAGTACAAGGA
TGGAGAGTACATCAAGGACCTGTCCTACCTCAACCGTGATCTGTCCAAGG
TGATTTTGATTGACACCAAGGAGGAGCACGCCCGCCTGCAGCCCGAAAAC
GCCGTCATTCTTGAGAAGTGGCTCGGCGACTCCAAGGACAAGACCCTCGT
CGGCATGATTCCCTTCCTCGAATACATTGCCGGTATGGGCGTCGAAGACG
TGCGTCCCGTCATCAAGTCCTTCGAGGGCACCCAGATCCCCGTGGAATTC
GCCAAGCGTGAGAAGGCCATGCGTGAGCGCTTTGAGAAGGAGCTGGCTGA
GGAGCAGAAGAAGCGCCCCCGCAGTGGTCTGGGCAGCTTCGCCTCTGCCC
TGGGCCTGAAGTCCACCCGCACCCTGGACGGCGAGCAGAGCCCCTCGGAG
GGCTTGGCCCAGGGTAAGATGCTGTGGGACCAGATCCGCGAGCGTGGCCA
GAAGAACTACGAGATGATTGAGAAGGAGATCCGTGAGAACGGCGAGAAGT
GGCTGGCCGAGATGGCCGCGGAGGAGGAGAAGGCCCGTCAGGAGCAAATG
GCCATGATGAAGGGCTCTTTCACCGGCATGTTCGGTGCTGGTCCTAAGCA
GTAAATGCTTAGTCGTGCCGTACTGCCTCTGACGAGGCCGAACGTCCTCA
CCTCGACCGTTCGAGCTTCAACTATTTCCGTCGCCCACTCGCGCTGGTAT
GCGAAGTCCACCAAGCCCAAGACTCCCTACAAGCTTCCTCAGTCCGTCAA
GTCTGCCAATTCAGAACAGTCGCCCAAGGCTCCCTCTCAGAACGACTACT
CCGCGGAGCAGGCCGAATTCGATACCAAGGCTGCGCCGGCCACCGAAGCC
TCTGAGACCGGTTCTACAGCTCCCCAAAACTATGCTCCTCAAAAACCCCT
GCCCGATCTCACCCAGGGCATTCCCTCCACCCTTGCCGCAGAATTGGAAG
CCGCCTCGAAGAACCGCGGATCAAGCAAGCTAAACCTCACAGAGGACCCG
TCGCGTGCGGAAGATTACGATGATGGTGGCCGTGATATTCCCAATTACGA
ATCCTCCCTCGATCGCAAGCGCGCCCGTATGGCCAACCTGATGTATGTCC
TGTTCCTGCTGGCAGGTGCTGGTGGTGTGGCCTATCTGGGCCGCAACTGG
GAGACCGAGGAGGAAGCGAAGGCCCACCCCGACGTGCCATCGGGCTGGGG
CTTCGGACTGATGTACAATCGTGCCAAGGCCCGCTTGGGCGATATCACCA
GCTACTACAAGGACCCTGCTTTCCCCAAGCTGCTGCCCGATGAGGACCCC
AACATGCGTCAGCCTTACACCCTTGTGCTGAGTCTGGAGGATCTCCTGGT
GCACAGCGAGTGGAGCCGTGAGCATGGATGGCGTGTGGCCAAGCGTCCGG
GTGTCGACTACTTCCTCCGCTACCTCAACCAGTACTACGAACTCGTCCTC
TTCACCAGTGTGCCCAGCATGATGGCCGATCAGGTGCTCCGGAAGCTTGA
CCCCTACCGCATCATCCGCTGGCCCTTGTTCCGTGAAGCCACCAAGTACA
AGGATGGAGAGTACATCAAGGACCTGTCCTACCTCAACCGTGATCTGTCC
AAGGTGATTTTGATTGACACCAAGGAGGAGCACGCCCGCCTGCAGCCCGA
AAACGCCGTCATTCTTGAGAAGTGGCTCGGCGACTCCAAGGACAAGACCC
TCGTCGGCATGATTCCCTTCCTCGAATACATTGCCGGTATGGGCGTCGAA
GACGTGCGTCCCGTCATCAAGTCCTTCGAGGGCACCCAGATCCCCGTGGA
ATTCGCCAAGCGTGAGAAGGCCATGCGTGAGCGCTTTGAGAAGGAGCTGG
CTGAGGAGCAGAAGAAGCGCCCCCGCAGTGGTCTGGGCAGCTTCGCCTCT
GCCCTGGGCCTGAAGTCCACCCGCACCCTGGACGGCGAGCAGAGCCCCTC
GGAGGGCTTGGCCCAGGGTAAGATGCTGTGGGACCAGATCCGCGAGCGTG
GCCAGAAGAACTACGAGATGATTGAGAAGGAGATCCGTGAGAACGGCGAG
AAGTGGCTGGCCGAGATGGCCGCGGAGGAGGAGAAGGCCCGTCAGGAGCA
AATGGCCATGATGAAGGGCTCTTTCACCGGCATGTTCGGTGCTGGTCCTA
AGCAGTAAATGCTTAGTCGTGCCGTACTGCCTCTGACGAGGCCGAACGTC
CTCACCTCGACCGTTCGAGCTTCAACTATTTCCGTCGCCCACTCGCGCTG
GTATGCGAAGTCCACCAAGCCCAAGACTCCCTACAAGCTTCCTCAGTCCG
TCAAGTCTGCCAATTCAGAACAGTCGCCCAAGGCTCCCTCTCAGAACGAC
TACTCCGCGGAGCAGGCCGAATTCGATACCAAGGCTGCGCCGGCCACCGA
AGCCTCTGAGACCGGTTCTACAGCTCCCCAAAACTATGCTCCTCAAAAAC
CCCTGCCCGATCTCACCCAGGGCATTCCCTCCACCCTTGCCGCAGAATTG
GAAGCCGCCTCGAAGAACCGCGGATCAAGCAAGCTAAACCTCACAGAGGA
CCCGTCGCGTGCGGAAGATTACGATGATGGTGGCCGTGATATTCCCAATT
ACGAATCCTCCCTCGATCGCAAGCGCGCCCGTATGGCCAACCTGATGTAT
GTCCTGTTCCTGCTGGCAGGTGCTGGTGGTGTGGCCTATCTGGGCCGCAA
CTGGGAGACCGAGGAGGAAGCGAAGGCCCACCCCGACGTGCCATCGGGCT
GGGGCTTCGGACTGATGTACAATCGTGCCAAGGCCCGCTTGGGCGATATC
ACCAGCTACTACAAGGACCCTGCTTTCCCCAAGCTGCTGCCCGATGAGGA
CCCCAACATGCGTCAGCCTTACACCCTTGTGCTGAGTCTGGAGGATCTCC
TGGTGCACAGCGAGTGGAGCCGTGAGCATGGATGGCGTGTGGCCAAGCGT
CCGGGTGTCGACTACTTCCTCCGCTACCTCAACCAGTACTACGAACTCGT
CCTCTTCACCAGTGTGCCCAGCATGATGGCCGATCAGGTGCTCCGGAAGC
TTGACCCCTACCGCATCATCCGCTGGCCCTTGTTCCGTGAAGCCACCAAG
TACAAGGATGGAGAGTACATCAAGGACCTGTCCTACCTCAACCGTGATCT
GTCCAAGGTGATTTTGATTGACACCAAGGAGGAGCACGCCCGCCTGCAGC
CCGAAAACGCCGTCATTCTTGAGAAGTGGCTCGGCGACTCCAAGGACAAG
ACCCTCGTCGGCATGATTCCCTTCCTCGAATACATTGCCGGTATGGGCGT
CGAAGACGTGCGTCCCGTCATCAAGTCCTTCGAGGGCACCCAGATCCCCG
TGGAATTCGCCAAGCGTGAGAAGGCCATGCGTGAGCGCTTTGAGAAGGAG
CTGGCTGAGGAGCAGAAGAAGCGCCCCCGCAGTGGTCTGGGCAGCTTCGC
CTCTGCCCTGGGCCTGAAGTCCACCCGCACCCTGGACGGCGAGCAGAGCC
CCTCGGAGGGCTTGGCCCAGGGTAAGATGCTGTGGGACCAGATCCGCGAG
CGTGGCCAGAAGAACTACGAGATGATTGAGAAGGAGATCCGTGAGAACGG
CGAGAAGTGGCTGGCCGAGATGGCCGCGGAGGAGGAGAAGGCCCGTCAGG
AGCAAATGGCCATGATGAAGGGCTCTTTCACCGGCATGTTCGGTGCTGGT
CCTAAGCAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005165-T1.utr5p1 | KJC3_005165-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005165-T1.utr3p1 | KJC3_005165-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262QRH |
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR023214 |
| DBxref | InterPro:IPR004274 |
| DBxref | PFAM:PF03031 |
| Product | mitochondrial inner membrane protein required for protein import |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1767254..1769393 + |
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