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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1823367..1825001- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005179-T1 ID=KJC3_005179-T1|Name=KJC3_005179-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1635bp|location=Sequence derived from alignment at ch4:1823367..1825001- (Aspergillus niger KJC3)
GATAGGCGGTCGGTTGCCGAAAACGCGGGGTCGCAGTAAGCCTTGCCGCA
GCACCGCTGCAGCTCGGCTTCTGCTATGCCCCTTGTGGATTCTGTTTACT
CTGGGCTCCAATAATCTTTCTCTGTCGTTGCAATCCCTCACCTATCTCAT
CACCACAAGGATCTGCTGACACTAATGTCTGCGCTTCTTTGGATGAACTA
CGATGATAGCCTGCGAATTCTTACCCCGGCTGCAAGTTGCCCGAGGTAGC
CGGCTTTTAGTTTCAGGCCCATCATATAGACCTACGCAACCCCGGATTCG
ATTCAAACCCTTCAATCATCCTATACAGCGATGCAGCTCTTCGGCTTCCA
AGCCCCAGCAGACATCTACAGACCTGAATATGGCGTCTCGAAAAACTTCT
AAGGCCAAGTCTACGCCTGCCGAGCCTCGGCCCAGTTCCAGGTTCGTCAT
ATGCCAAGCTTCGCCCGGCAGTCTCATTGTCCATTATATTCCTACTATAT
TGAACCCCTTACTCCTACAACTTGTATCGCGTTGGGATCAGTAGAGCTCA
GTGCTGACCTTATTCCCAGCGTAATCATCATCTCTCCGCGGAATGAGGTC
CTTCTCCTTCACCGCGTCAAGACATCAACGTCTTACCCATCGGCACATGT
CTTCCCAGGAGGAAACCTCTCCAGCCAGGACGGCCCATGTCCACCGGTAG
ATGACATCTCCCGCCACGATGACGGACCCTGGTATCGAAACGCCGCCATT
CGCGAATTGTTCGAAGAAAGTGGCATTCTCCTGGCCAAGGACGCTGACTC
GGGCAAGATGCTCGCTGTACCACAGGAGCAGCGTGAAGCTGGTCGACGCG
CGATCCATCAACATAAGATGACATTCGCAGAATGGTTAAAGGAACAGCAT
CCCGCCGCAGTACCGGATACGGAAGGTCTGATAGCATTCACACGCTGGCT
CACGCCCATCAGATATCCGAGACGGTATACGACCCAGATGTACCTGTACT
TCTTACCATTGCCGATGGAGGTTGGGAAGCCCATTCTGGATGAGATCCCA
CATGAGGGTGAGAAAGAGGAGATTCAGATTCCGACGAGCGATGGCGGAGT
GGAGATCTCTGAGGCGAGGTTCTTGCCTGCCTCGGAATGGATTCGCATGG
CGCAGAAGGGTGAGGCCATTTTGTTCCCGCCTCAGTTCTTGCTGCTTCAT
TTGATGGCGGATTTCCTGGCACAGGGATCATCGGGGGTGGAGTCTGTTGA
GGAGTTGAAGAGGCAGCGAGAGGAATTGTTGCAGTTCATTCATTCGGGCC
AGCCGCCGTGGACGGACAAGTGTATCTGTCCGAAGGCGCTGCAGATTGCG
TCTGATGGCCAGACGGTGATGAAGTTGGATCATCCTGGTCCGGAATTGGA
GGGTACTGACCGGAAGGGAGATACGGAGCGGGTTGTACAGCTAAAGTTCA
TCAAGGGTGTTCCTCGGGAGCTTGTGGTGCGGTGGAAGAAGGATGTGTTT
AAGGAGAGCCGTCTATAGCAGTGTCTGGGTGTATTTGTCAGTAGTTGGCT
TACAGAATAGTGAATATACAGCATCTAGATGCCAGTTTATACCAATCAAG
TTATCACGGTAAATGAAGTCCATCGGATGTCATCA back to topCoding sequence (CDS) from alignment at ch4:1823367..1825001- >KJC3_005179-T1 ID=KJC3_005179-T1|Name=KJC3_005179-T1|organism=Aspergillus niger KJC3|type=CDS|length=2376bp|location=Sequence derived from alignment at ch4:1823367..1825001- (Aspergillus niger KJC3)
CGTAATCATCATCTCTCCGCGGAATGAGGTCCTTCTCCTTCACCGCGTCA
AGACATCAACGTCTTACCCATCGGCACATGTCTTCCCAGGAGGAAACCTC
TCCAGCCAGGACGGCCCATGTCCACCGGTAGATGACATCTCCCGCCACGA
TGACGGACCCTGGTATCGAAACGCCGCCATTCGCGAATTGTTCGAAGAAA
GTGGCATTCTCCTGGCCAAGGACGCTGACTCGGGCAAGATGCTCGCTGTA
CCACAGGAGCAGCGTGAAGCTGGTCGACGCGCGATCCATCAACATAAGAT
GACATTCGCAGAATGGTTAAAGGAACAGCATCCCGCCGCAGTACCGGATA
CGGAAGGTCTGATAGCATTCACACGCTGGCTCACGCCCATCAGATATCCG
AGACGGTATACGACCCAGATGTACCTGTACTTCTTACCATTGCCGATGGA
GGTTGGGAAGCCCATTCTGGATGAGATCCCACATGAGGGTGAGAAAGAGG
AGATTCAGATTCCGACGAGCGATGGCGGAGTGGAGATCTCTGAGGCGAGG
TTCTTGCCTGCCTCGGAATGGATTCGCATGGCGCAGAAGGGTGAGGCCAT
TTTGTTCCCGCCTCAGTTCTTGCTGCTTCATTTGATGGCGGATTTCCTGG
CACAGGGATCATCGGGGGTGGAGTCTGTTGAGGAGTTGAAGAGGCAGCGA
GAGGAATTGTTGCAGTTCATTCATTCGGGCCAGCCGCCGTGGACGGACAA
GTGTATCTGTCCGAAGGCGCTGCAGATTGCGTCTGATGGCCAGACGGTGA
TGAAGTTGGATCATCCTGGTCCGGAATTGGAGGGTACTGACCGGAAGGGA
GATACGGAGCGGGTTGTACAGCTAAAGTTCATCAAGGGTGTTCCTCGGGA
GCTTGTGGTGCGGTGGAAGAAGGATGTGTTTAAGGAGAGCCGTCTATAGA
TGATAGCCTGCGAATTCTTACCCCGGCTGCAAGTTGCCCGAGGTAGCCGG
CTTTTAGTTTCAGGCCCATCATATAGACCTACGCAACCCCGGATTCGATT
CAAACCCTTCAATCATCCTATACAGCGATGCAGCTCTTCGGCTTCCAAGC
CCCAGCAGACATCTACAGACCTGAATATGGCGTCTCGAAAAACTTCTAAG
GCCAAGTCTACGCCTGCCGAGCCTCGGCCCAGTTCCAGCGTAATCATCAT
CTCTCCGCGGAATGAGGTCCTTCTCCTTCACCGCGTCAAGACATCAACGT
CTTACCCATCGGCACATGTCTTCCCAGGAGGAAACCTCTCCAGCCAGGAC
GGCCCATGTCCACCGGTAGATGACATCTCCCGCCACGATGACGGACCCTG
GTATCGAAACGCCGCCATTCGCGAATTGTTCGAAGAAAGTGGCATTCTCC
TGGCCAAGGACGCTGACTCGGGCAAGATGCTCGCTGTACCACAGGAGCAG
CGTGAAGCTGGTCGACGCGCGATCCATCAACATAAGATGACATTCGCAGA
ATGGTTAAAGGAACAGCATCCCGCCGCAGTACCGGATACGGAAGGTCTGA
TAGCATTCACACGCTGGCTCACGCCCATCAGATATCCGAGACGGTATACG
ACCCAGATGTACCTGTACTTCTTACCATTGCCGATGGAGGTTGGGAAGCC
CATTCTGGATGAGATCCCACATGAGGGTGAGAAAGAGGAGATTCAGATTC
CGACGAGCGATGGCGGAGTGGAGATCTCTGAGGCGAGGTTCTTGCCTGCC
TCGGAATGGATTCGCATGGCGCAGAAGGGTGAGGCCATTTTGTTCCCGCC
TCAGTTCTTGCTGCTTCATTTGATGGCGGATTTCCTGGCACAGGGATCAT
CGGGGGTGGAGTCTGTTGAGGAGTTGAAGAGGCAGCGAGAGGAATTGTTG
CAGTTCATTCATTCGGGCCAGCCGCCGTGGACGGACAAGTGTATCTGTCC
GAAGGCGCTGCAGATTGCGTCTGATGGCCAGACGGTGATGAAGTTGGATC
ATCCTGGTCCGGAATTGGAGGGTACTGACCGGAAGGGAGATACGGAGCGG
GTTGTACAGCTAAAGTTCATCAAGGGTGTTCCTCGGGAGCTTGTGGTGCG
GTGGAAGAAGGATGTGTTTAAGGAGAGCCGTCTATAGATGATAGCCTGCG
AATTCTTACCCCGGCTGCAAGTTGCCCGAGGTAGCCGGCTTTTAGTTTCA
GGCCCATCATATAGACCTACGCAACCCCGGATTCGATTCAAACCCTTCAA
TCATCCTATACAGCGATGCAGCTCTTCGGCTTCCAAGCCCCAGCAGACAT
CTACAGACCTGAATATGGCGTCTCGAAAAACTTCTAAGGCCAAGTCTACG
CCTGCCGAGCCTCGGCCCAGTTCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005179-T1.utr3p1 | KJC3_005179-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005179-T1.utr5p1 | KJC3_005179-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015797 |
| DBxref | InterPro:IPR000086 |
| DBxref | PFAM:PF00293 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1823367..1825001 - |
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