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KJC3_005186-T1, KJC3_005186-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005186-T1
Unique NameKJC3_005186-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1843401..1844735-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005186-T1 ID=KJC3_005186-T1|Name=KJC3_005186-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1335bp|location=Sequence derived from alignment at ch4:1843401..1844735- (Aspergillus niger KJC3)
ATGGCTTCCACAACCTCGGCCCCCTCATCGCAGCCAACGGCTTCCTCAAA
CCTAACGGTTTTGCCTCCTATAATCACAGGCTCCCCAGTTAAGCGGCAGG
GCCGTCAGCGATCCTCCTCGTACGCGAAGGATCGTCTCTCAACGCACTCT
AATGTTTCCTTAGCTTCTCAGAATCGGTCGCGGCCGGGATCCCACGTCTT
TCCTGTCTTTCATTCCAGCTTACCGTATGCGCTGGTTCGCGACTTTGCGT
ATCCTCCTATCCATCCTCTTCACTACGGCCCATTGCCGCCTCGTGCATCG
GTAGTATCCACCCCGGCAAGTGAGCAACGGCGCCTGTCCGATCCTCCGGC
CCCATGGGACAGTTCTCGTGGCCAATGGTCCGTGGGACCGTGGACTACCG
ACCATAGCTATGGGCATCAGCAACTTCCCGCCATGTCCTTTGGCGATGGA
CCGCCGTATAGCGAGGATGAAGACTTGCACAGCCCAGTCTTTTCCGCCCC
CCGTCACCGGAAAAACAAGTCCACCGGAACGGACCTTAATGGACGGAAAG
CCAGGGGCCCTGGTGGCCGTGAGCATCAAGGCATGAGCTATGAGGCGGAT
ACCGATCGGGGTACGCTTGTCAGTATGAACGCGGACGGCAGTGAGACGTA
CTATGTAAACGATGACGACGCTTTGGAGGATGGACCGGGCGGCGAGTATG
TCACCTATCCGGCGAACGAAAGCCGGTATTCTCACGTGGGCTCATATGGC
GACTATCAAGCCTATGGACATGATGCGGACTTTGATTCTGAAGACGACTA
TGCTGGGGATCATCGGTACTCGCGTGACTTCCAGTTTGCTGTGGGATGCC
CTGATGAGGAGATGCACGGAAAAGCGGTTGCGCTGTTCGATTTCACAAGA
GAGCATGAGAACGAGCTGCCTCTTACTGAAGGACAGGTTATCTTCGTCTC
ATACCGGCACGGTCAGGGCTGGCTTGTTGCGGAGGATCCCAAGACTGGGG
AGAGCGGGCTGGTACCAGAGGAGTTTGTGCGTCTGCTTCGAGATATCGAG
GGAGGGCTGACGTCGTTGAACGGCGAGCCTGATGCGGACGAAGAGAACAA
TACGTACCTGAGCCCGGAGTCGACAGACTCCCAGCAAGCTATTACACCCA
CGCAAGACGAACAGCTCCCACTAGAATCGACCTACGTTAGCGTCGAGCAT
GTCTCCAACGGGGAGAAGAGGAAGTCTTCCCATCTGTCTAGCGGTGGCAA
GACGGATTCGAACATGTCACATTTCCCGGCAGAAGATCAGGGGCTTGAAG
CCCCGCAAGACCTTCCTGAAAAGAAGGTGGCCTAG
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Coding sequence (CDS) from alignment at ch4:1843401..1844735-

>KJC3_005186-T1 ID=KJC3_005186-T1|Name=KJC3_005186-T1|organism=Aspergillus niger KJC3|type=CDS|length=1335bp|location=Sequence derived from alignment at ch4:1843401..1844735- (Aspergillus niger KJC3)
ATGGCTTCCACAACCTCGGCCCCCTCATCGCAGCCAACGGCTTCCTCAAA
CCTAACGGTTTTGCCTCCTATAATCACAGGCTCCCCAGTTAAGCGGCAGG
GCCGTCAGCGATCCTCCTCGTACGCGAAGGATCGTCTCTCAACGCACTCT
AATGTTTCCTTAGCTTCTCAGAATCGGTCGCGGCCGGGATCCCACGTCTT
TCCTGTCTTTCATTCCAGCTTACCGTATGCGCTGGTTCGCGACTTTGCGT
ATCCTCCTATCCATCCTCTTCACTACGGCCCATTGCCGCCTCGTGCATCG
GTAGTATCCACCCCGGCAAGTGAGCAACGGCGCCTGTCCGATCCTCCGGC
CCCATGGGACAGTTCTCGTGGCCAATGGTCCGTGGGACCGTGGACTACCG
ACCATAGCTATGGGCATCAGCAACTTCCCGCCATGTCCTTTGGCGATGGA
CCGCCGTATAGCGAGGATGAAGACTTGCACAGCCCAGTCTTTTCCGCCCC
CCGTCACCGGAAAAACAAGTCCACCGGAACGGACCTTAATGGACGGAAAG
CCAGGGGCCCTGGTGGCCGTGAGCATCAAGGCATGAGCTATGAGGCGGAT
ACCGATCGGGGTACGCTTGTCAGTATGAACGCGGACGGCAGTGAGACGTA
CTATGTAAACGATGACGACGCTTTGGAGGATGGACCGGGCGGCGAGTATG
TCACCTATCCGGCGAACGAAAGCCGGTATTCTCACGTGGGCTCATATGGC
GACTATCAAGCCTATGGACATGATGCGGACTTTGATTCTGAAGACGACTA
TGCTGGGGATCATCGGTACTCGCGTGACTTCCAGTTTGCTGTGGGATGCC
CTGATGAGGAGATGCACGGAAAAGCGGTTGCGCTGTTCGATTTCACAAGA
GAGCATGAGAACGAGCTGCCTCTTACTGAAGGACAGGTTATCTTCGTCTC
ATACCGGCACGGTCAGGGCTGGCTTGTTGCGGAGGATCCCAAGACTGGGG
AGAGCGGGCTGGTACCAGAGGAGTTTGTGCGTCTGCTTCGAGATATCGAG
GGAGGGCTGACGTCGTTGAACGGCGAGCCTGATGCGGACGAAGAGAACAA
TACGTACCTGAGCCCGGAGTCGACAGACTCCCAGCAAGCTATTACACCCA
CGCAAGACGAACAGCTCCCACTAGAATCGACCTACGTTAGCGTCGAGCAT
GTCTCCAACGGGGAGAAGAGGAAGTCTTCCCATCTGTCTAGCGGTGGCAA
GACGGATTCGAACATGTCACATTTCCCGGCAGAAGATCAGGGGCTTGAAG
CCCCGCAAGACCTTCCTGAAAAGAAGGTGGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005186KJC3_005186Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005186-T1.cdsKJC3_005186-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005186-T1.exon1KJC3_005186-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005186-T1KJC3_005186-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR001452
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1843401..1844735 -
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