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KJC3_005192-T1, KJC3_005192-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005192-T1
Unique NameKJC3_005192-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1865865..1867123-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005192-T1 ID=KJC3_005192-T1|Name=KJC3_005192-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1259bp|location=Sequence derived from alignment at ch4:1865865..1867123- (Aspergillus niger KJC3)
AATTCCCCTCTTCTCCGCCCATTGCTCGCCGTCGACTATAATCTGAGCCT
GCATACTGTGTCGCTTCGTGCCTGTACTCGAATTAAACTCTCCGATACGG
CTTTAATAACTCTTCGACAAAATTTGACAGCGCATGGTGCGGGGAACCAC
GCCAAAACTTCCTCCATCTTAATTTCGGCATACCGATTGAAGCACCTCCC
AGATCACAATGCCTCTCGACACATCCACAACATATCCCCTCACCAAGCTT
CGCCTTGATGGCCGTCGCTGGAATGAGCTTCGACTGCTCCAGGCCCAGAT
CTCCACGAACCCCGCCAGTTCGGGCTCATCCTACTTGGCCATGGGCAACA
CCGCGATCCTGTGCTCCGTCCACGGTCCCGCAGAAGGACGTCGCGGTGAT
GCCACGGGTGGTGCTGCTGGATCAGCAGGTGCGGTAGTAGAGGTGGATGT
CAACGTTGCAGGATTTGCTGGGGTGGATCGCAAGCGCAGAGCCGGCGGAA
GTGATAAGTACGTTGCTCTAGACTATCGTCATGTCTGATGTTTCTGCTGT
GTCTGGTACTGACTATAACCTTGAATAGACAATCTTCGCGCGTCGCAACG
ATACTACGCTCTGCTTTCCAGTCGCATCTCCATACCCACCTCTACCCTCA
CAGTACGATCAGCATCCACGTCTCAGTTTTGTCGTCAGACGGATCGCTTC
TCGCGGCGGCAGTCAATGCCTGTACGCTGGCGCTTGTGGATGCCGGTATT
CCTATGCCAGGACTCCTCTGTGGGTGTACGTCAGGAATGAGCGGCAGTGC
GTCCACACCGCGGGACCCGAATAATGACACATTGGATCCGCTGCTGGACT
TGTCTCTGCCAGAGGAGCAGGAGCTTCCGTTCCTTACGGTGGGGACTACG
ACGGCTGTACCGGTGGGCGAGGCGGCTATGATTAATGAAGATGAGGACGA
GATGAAGGTAGCAATGCTGACGATGGACTCCAAGGTGCATTGCACATACG
TTGAAACAATGCTGGCGGTGGGAATTGACGGGTGCAAGCAGATTCGGGAG
ATCTTGGAAGGCGTGATTAAGAAGTCGGCACGCCGGTGATGACTTGGATT
TGGATTCTGTTTCTTTATATCTGCTATCTGGGATCTTGTACAGGGCAGCG
CGATAGGGCGAGTTCTGTTTATACCCAGTGATTGCCATGGGAGGTGTTGG
GCGCGGCGGGATGGATCGTTTCAGTGTGATATTTGACTATTCCAGCGAAT
ACAGACTCG
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Coding sequence (CDS) from alignment at ch4:1865865..1867123-

>KJC3_005192-T1 ID=KJC3_005192-T1|Name=KJC3_005192-T1|organism=Aspergillus niger KJC3|type=CDS|length=1620bp|location=Sequence derived from alignment at ch4:1865865..1867123- (Aspergillus niger KJC3)
ACAATCTTCGCGCGTCGCAACGATACTACGCTCTGCTTTCCAGTCGCATC
TCCATACCCACCTCTACCCTCACAGTACGATCAGCATCCACGTCTCAGTT
TTGTCGTCAGACGGATCGCTTCTCGCGGCGGCAGTCAATGCCTGTACGCT
GGCGCTTGTGGATGCCGGTATTCCTATGCCAGGACTCCTCTGTGGGTGTA
CGTCAGGAATGAGCGGCAGTGCGTCCACACCGCGGGACCCGAATAATGAC
ACATTGGATCCGCTGCTGGACTTGTCTCTGCCAGAGGAGCAGGAGCTTCC
GTTCCTTACGGTGGGGACTACGACGGCTGTACCGGTGGGCGAGGCGGCTA
TGATTAATGAAGATGAGGACGAGATGAAGGTAGCAATGCTGACGATGGAC
TCCAAGGTGCATTGCACATACGTTGAAACAATGCTGGCGGTGGGAATTGA
CGGGTGCAAGCAGATTCGGGAGATCTTGGAAGGCGTGATTAAGAAGTCGG
CACGCCGGTGAATGCCTCTCGACACATCCACAACATATCCCCTCACCAAG
CTTCGCCTTGATGGCCGTCGCTGGAATGAGCTTCGACTGCTCCAGGCCCA
GATCTCCACGAACCCCGCCAGTTCGGGCTCATCCTACTTGGCCATGGGCA
ACACCGCGATCCTGTGCTCCGTCCACGGTCCCGCAGAAGGACGTCGCGGT
GATGCCACGGGTGGTGCTGCTGGATCAGCAGGTGCGGTAGTAGAGGTGGA
TGTCAACGTTGCAGGATTTGCTGGGGTGGATCGCAAGCGCAGAGCCGGCG
GAAGTGATAAACAATCTTCGCGCGTCGCAACGATACTACGCTCTGCTTTC
CAGTCGCATCTCCATACCCACCTCTACCCTCACAGTACGATCAGCATCCA
CGTCTCAGTTTTGTCGTCAGACGGATCGCTTCTCGCGGCGGCAGTCAATG
CCTGTACGCTGGCGCTTGTGGATGCCGGTATTCCTATGCCAGGACTCCTC
TGTGGGTGTACGTCAGGAATGAGCGGCAGTGCGTCCACACCGCGGGACCC
GAATAATGACACATTGGATCCGCTGCTGGACTTGTCTCTGCCAGAGGAGC
AGGAGCTTCCGTTCCTTACGGTGGGGACTACGACGGCTGTACCGGTGGGC
GAGGCGGCTATGATTAATGAAGATGAGGACGAGATGAAGGTAGCAATGCT
GACGATGGACTCCAAGGTGCATTGCACATACGTTGAAACAATGCTGGCGG
TGGGAATTGACGGGTGCAAGCAGATTCGGGAGATCTTGGAAGGCGTGATT
AAGAAGTCGGCACGCCGGTGAATGCCTCTCGACACATCCACAACATATCC
CCTCACCAAGCTTCGCCTTGATGGCCGTCGCTGGAATGAGCTTCGACTGC
TCCAGGCCCAGATCTCCACGAACCCCGCCAGTTCGGGCTCATCCTACTTG
GCCATGGGCAACACCGCGATCCTGTGCTCCGTCCACGGTCCCGCAGAAGG
ACGTCGCGGTGATGCCACGGGTGGTGCTGCTGGATCAGCAGGTGCGGTAG
TAGAGGTGGATGTCAACGTTGCAGGATTTGCTGGGGTGGATCGCAAGCGC
AGAGCCGGCGGAAGTGATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005192KJC3_005192Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005192-T1KJC3_005192-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005192-T1.cdsKJC3_005192-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005192-T1.utr3p1KJC3_005192-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005192-T1.exon2KJC3_005192-T1.exon2Aspergillus niger KJC3exon
KJC3_005192-T1.exon1KJC3_005192-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005192-T1.utr5p1KJC3_005192-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926407T
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR036345
DBxrefInterPro:IPR001247
DBxrefInterPro:IPR027408
DBxrefPFAM:PF01138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1865865..1867123 -
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