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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1867116..1870624+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005193-T1 ID=KJC3_005193-T1|Name=KJC3_005193-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3509bp|location=Sequence derived from alignment at ch4:1867116..1870624+ (Aspergillus niger KJC3)
GGGGAATTGGTTGCGGAGTTTGACTTTTCGGCGCGGAATTCTTCAGTCAG
CTGCTTGCCCAATCGGGAAGCCCGTTTGACTCCATCGCGTCTCCGCATCT
CCATCTCTCTTACACTTGCTTCTGCCTTCCCCTCAAAGGTCGGTCCAGAT
AGCTTCTGCCAGAGCTCAGCCGGATATGGGCTCACACGTGGAGATCGAGG
ATACTGACGCGACTACGGTCGGATCGGATGACGATGATCTCGATGGGGCA
CGCCCGTTGGTCTTACAGCCTACTTCGCTTCCTGTCGCTGGTTTGTCCCC
GCACCTTATCTATACCTCAATATCAAGACATATCTGACTTTTCGATGATC
GTAGATAGAGACCATGTCCCAAAGTCTGAAGTTACGACTCCACGTCGGCC
AACAACTACCCCAACTACGATCAAGCAATCCTCTTCGCCACTCGACAAGA
AGAGCCACACAGTAGTGGAGGTGCTCGACACCGACAGCGGAGATGACTCC
TTCAATGAGGGCGAGGCCGCTTACAAGGAGTTCAAGAACAGAAAGGCCAC
GAAACGGAAACGGAGCACCGCAAACTTAAGAAACCGAGCTACTAAGGTGA
CGAGAGTCGCAACCTCGAACTCCATCGTCGGCCGAATCCCAACTTCCGAT
GGGAAAGCCCGACCGAGACGGCCATTACGGGTATATGGAGAGGAAGTGTC
ATCGGAGGATGAGCTGATGGAACACACCTTACCTGATTATCTCCAGAAAC
GGCAATCGCAGTTTGACCGGAGGACAGAGTATCTAAAACAATCTGGGCTG
AAGTTGCCGCCAAGCTACGACGATGTTGAGTTCTCCGACGATGAGAGGTT
GGAATCTTTGGCTGAAAAGCCCGCTTTCGAGAATATGACGCCATGCAATC
AGTACAAAGACATCACCCTTCCTTATTCGCTGGGGCTTATACCAGCCCCG
ATCGCACAGTGGTTGCGCCAGTACCAGGTCGATGGAGCTGCTTTCCTGCA
TGAGCTGTTTGTTTACCAGAAGGGTGGGATCCTTGGAGATGACATGGGTC
TGGGAAAGACCGTGCAAGTCATTGCATTTCTCACAGCGGCGTATGGGAAG
ACAGGCGATGAGAGAGACGCAAAGCGAATGAGAAAGATGCGGAGAAGTGG
ACACGATCAGTGGTATCCCCGAACGTTGATCGTCTGCCCAGGAACCCTTC
TTAAGAATTGGATGGCCGAGCTTGCGCGTTGGGGCTGGTGGCATTTCGAT
ACATACCATGGTGAAAACAAGGAGCTTGCACTCCAAGCTGCGCGGTCTGG
AAGACTGGAAATCTTGATAACCACTTACAGTACTTATCTTCACAACAAGG
ATGCCATCAACATGGTCGATTGGGACTGTGTGATAGCAGACGAATGCCAT
ATTATCAAGGAGCGCAAGTCAGAAACGACTAAAGCGATGAACATGATCAA
CGCTCTTTGCCGAATCGGCTTGACCGGAACCGCCATTCAGAACAAATACG
AGGAGCTTTGGACACTCCTCAACTGGACGAACCCAGGGAAGCTTGGCCCG
GTAACTGTCTGGAAGAAGACCATTTCTGAACCTCTGAAGATTGGCCAGTC
ACACGACGCCACCGTCCATCAGCTGCGCAGAGCACGAACGACGGCGAAGA
AGTTGGTGGAGAACCTCTTGCCGCAGTTCTTTCTCCGCCGGATGAAGACC
CTGATTGCAGACCAGCTTCCCAAGAAGGTTGATCGCGTCGTCTTCTGCCC
GCTCACTGATACCCAGGCCGACGCCTACGTGAACATTCTGGGAAGCGACA
TGGCCAGCTATATCAAACACTCTACCGACCCTTGTGACTGCGGTTCCCGA
CAGAAAGCTGGCTGGTGCTGTCGCCAGTTTCTACCATCTGGGGTCACCTG
GCGAAGCTACGTCTTTCCCGCGATAGCAGTGCTGCAGAAGCTCAGCAACC
ACCTGGCAATTCTCATCCCGCAGGGAGTCGATTCTAACGAGAAACAAGAA
AAGGACAAAGAGATGCTGGAGCTGGCTGTGCCCGAGCAATGGGAAAAGCT
TTACCGTTCCCGGGACTCAATCGTCAACTACGCGAACCCTGAATTCTGCG
GTAAATGGAAGGTTCTTCGTCGACTGCTGAAGTGGTGGCACGCCAATGGC
GACAAGGTACTCGTTTTCAGCCACAGCGTGCGCCTCCTCAAAATGCTCCA
GATGCTCTTTCACTACACCAGCTATAACGTCAGTTACCTCGATGGGTCGA
TGAGCTACGAGGAGCGTACTAAAGTCGTTGATGATTTTAATTCCAATCCA
CGCCAATTCGTCTTCCTCATCTCTACTCGCTCTGGTGGCGTCGGACTCAA
CATAACTTCCGCCAACAAGGTCGTCATCGTCGATCCCAACTGGAACCCCT
CGCACGACCTTCAAGCGCAAGATCGCGCCTACCGTATCGGCCAGTCTCGC
GATGTTGAAGTCTTCCGGCTCATCTCCGCCGGCACCATCGAGGAGATCGT
CTACGCCCGGCAGATCTACAAACAACAACAAGCCAACATTGGCTACAACG
CAAGCTCGGAACGACGCTACTTCAAGGGTGTTCAAGAGAAGAAAGACCAA
AAGGGCGAGCTCTTCGGTCTGGACAATCTATTCGAATACAAGAACCAGAA
CATCCTTCTCCGCGACATCGTCAACAAAACCAACGTCGCTGAAAGCAAAG
CTGGCGTGCAGGTTATGGACATCGACGTAGACTACGACCCCAATGTCTCC
GACCAAACCTTCACGGGCAAATCCGACGACACCAACGAAGTCATGAGCCA
GTTAGCAGCCATGATTCGCGGCGAGGACGACGAAGAACCCACCCACCCCC
AAACCCCCATCAACACCAAGCATGACCCCATCCAAGCCATCCTCGCCGGC
GCAGGGGTCGAATACACCCACCTCAACAACGAAGTCATCGGGTCATCCAA
AGTCGAGGAGCGGCTCAGCCGTCGCGCCGAACTGGCTGACGAGAATAACA
AGAACCTAGACATGCAAGTCTTTGCAGGATCCCAGTCCCAGTCCCAGTCC
CAGTCTCATAAAAAGTCATCATCATCTTCAACCAAGCAACCAATCAAATA
CAAGTTTCATCCGCCAAAGCGTGTCATGAAACGACAATTTTGCAGCATGG
CGAAACGTTACGGCTTCCCAAACGCAACCGAATTCGCTCTTGTCGTGGAG
GGGATGACGCAGGCGCAGCGACGCGCATGCTTGGAGCGTTGGTATGCTGA
GCGACGGGAAAAGCTTTCTCAACCGTCTTGATCCTATCATATATCATATA
CCATTTTATCCTCCTATATCTCTTTTTGGAGCATTGGTTACAAGTTCATT
AGGGAGTTACGGGTTCTAGATTTGTTTTTGTCTGTTTTACGGTACTATAT
ACCCATGTTGACTAGCTAGTTTTTTACTTAACCCAGCGACGAGTGACGAT
TGATACCAAATAAAGCACTAGTGATACCAGTGAACATTTACCGACCTGTA
TCGAGCCCT back to topCoding sequence (CDS) from alignment at ch4:1867116..1870624+ >KJC3_005193-T1 ID=KJC3_005193-T1|Name=KJC3_005193-T1|organism=Aspergillus niger KJC3|type=CDS|length=6084bp|location=Sequence derived from alignment at ch4:1867116..1870624+ (Aspergillus niger KJC3)
ATGGGCTCACACGTGGAGATCGAGGATACTGACGCGACTACGGTCGGATC
GGATGACGATGATCTCGATGGGGCACGCCCGTTGGTCTTACAGCCTACTT
CGCTTCCTGTCGCTGATAGAGACCATGTCCCAAAGTCTGAAGTTACGACT
CCACGTCGGCCAACAACTACCCCAACTACGATCAAGCAATCCTCTTCGCC
ACTCGACAAGAAGAGCCACACAGTAGTGGAGGTGCTCGACACCGACAGCG
GAGATGACTCCTTCAATGAGGGCGAGGCCGCTTACAAGGAGTTCAAGAAC
AGAAAGGCCACGAAACGGAAACGGAGCACCGCAAACTTAAGAAACCGAGC
TACTAAGGTGACGAGAGTCGCAACCTCGAACTCCATCGTCGGCCGAATCC
CAACTTCCGATGGGAAAGCCCGACCGAGACGGCCATTACGGGTATATGGA
GAGGAAGTGTCATCGGAGGATGAGCTGATGGAACACACCTTACCTGATTA
TCTCCAGAAACGGCAATCGCAGTTTGACCGGAGGACAGAGTATCTAAAAC
AATCTGGGCTGAAGTTGCCGCCAAGCTACGACGATGTTGAGTTCTCCGAC
GATGAGAGGTTGGAATCTTTGGCTGAAAAGCCCGCTTTCGAGAATATGAC
GCCATGCAATCAGTACAAAGACATCACCCTTCCTTATTCGCTGGGGCTTA
TACCAGCCCCGATCGCACAGTGGTTGCGCCAGTACCAGGTCGATGGAGCT
GCTTTCCTGCATGAGCTGTTTGTTTACCAGAAGGGTGGGATCCTTGGAGA
TGACATGGGTCTGGGAAAGACCGTGCAAGTCATTGCATTTCTCACAGCGG
CGTATGGGAAGACAGGCGATGAGAGAGACGCAAAGCGAATGAGAAAGATG
CGGAGAAGTGGACACGATCAGTGGTATCCCCGAACGTTGATCGTCTGCCC
AGGAACCCTTCTTAAGAATTGGATGGCCGAGCTTGCGCGTTGGGGCTGGT
GGCATTTCGATACATACCATGGTGAAAACAAGGAGCTTGCACTCCAAGCT
GCGCGGTCTGGAAGACTGGAAATCTTGATAACCACTTACAGTACTTATCT
TCACAACAAGGATGCCATCAACATGGTCGATTGGGACTGTGTGATAGCAG
ACGAATGCCATATTATCAAGGAGCGCAAGTCAGAAACGACTAAAGCGATG
AACATGATCAACGCTCTTTGCCGAATCGGCTTGACCGGAACCGCCATTCA
GAACAAATACGAGGAGCTTTGGACACTCCTCAACTGGACGAACCCAGGGA
AGCTTGGCCCGGTAACTGTCTGGAAGAAGACCATTTCTGAACCTCTGAAG
ATTGGCCAGTCACACGACGCCACCGTCCATCAGCTGCGCAGAGCACGAAC
GACGGCGAAGAAGTTGGTGGAGAACCTCTTGCCGCAGTTCTTTCTCCGCC
GGATGAAGACCCTGATTGCAGACCAGCTTCCCAAGAAGGTTGATCGCGTC
GTCTTCTGCCCGCTCACTGATACCCAGGCCGACGCCTACGTGAACATTCT
GGGAAGCGACATGGCCAGCTATATCAAACACTCTACCGACCCTTGTGACT
GCGGTTCCCGACAGAAAGCTGGCTGGTGCTGTCGCCAGTTTCTACCATCT
GGGGTCACCTGGCGAAGCTACGTCTTTCCCGCGATAGCAGTGCTGCAGAA
GCTCAGCAACCACCTGGCAATTCTCATCCCGCAGGGAGTCGATTCTAACG
AGAAACAAGAAAAGGACAAAGAGATGCTGGAGCTGGCTGTGCCCGAGCAA
TGGGAAAAGCTTTACCGTTCCCGGGACTCAATCGTCAACTACGCGAACCC
TGAATTCTGCGGTAAATGGAAGGTTCTTCGTCGACTGCTGAAGTGGTGGC
ACGCCAATGGCGACAAGGTACTCGTTTTCAGCCACAGCGTGCGCCTCCTC
AAAATGCTCCAGATGCTCTTTCACTACACCAGCTATAACGTCAGTTACCT
CGATGGGTCGATGAGCTACGAGGAGCGTACTAAAGTCGTTGATGATTTTA
ATTCCAATCCACGCCAATTCGTCTTCCTCATCTCTACTCGCTCTGGTGGC
GTCGGACTCAACATAACTTCCGCCAACAAGGTCGTCATCGTCGATCCCAA
CTGGAACCCCTCGCACGACCTTCAAGCGCAAGATCGCGCCTACCGTATCG
GCCAGTCTCGCGATGTTGAAGTCTTCCGGCTCATCTCCGCCGGCACCATC
GAGGAGATCGTCTACGCCCGGCAGATCTACAAACAACAACAAGCCAACAT
TGGCTACAACGCAAGCTCGGAACGACGCTACTTCAAGGGTGTTCAAGAGA
AGAAAGACCAAAAGGGCGAGCTCTTCGGTCTGGACAATCTATTCGAATAC
AAGAACCAGAACATCCTTCTCCGCGACATCGTCAACAAAACCAACGTCGC
TGAAAGCAAAGCTGGCGTGCAGGTTATGGACATCGACGTAGACTACGACC
CCAATGTCTCCGACCAAACCTTCACGGGCAAATCCGACGACACCAACGAA
GTCATGAGCCAGTTAGCAGCCATGATTCGCGGCGAGGACGACGAAGAACC
CACCCACCCCCAAACCCCCATCAACACCAAGCATGACCCCATCCAAGCCA
TCCTCGCCGGCGCAGGGGTCGAATACACCCACCTCAACAACGAAGTCATC
GGGTCATCCAAAGTCGAGGAGCGGCTCAGCCGTCGCGCCGAACTGGCTGA
CGAGAATAACAAGAACCTAGACATGCAAGTCTTTGCAGGATCCCAGTCCC
AGTCCCAGTCCCAGTCTCATAAAAAGTCATCATCATCTTCAACCAAGCAA
CCAATCAAATACAAGTTTCATCCGCCAAAGCGTGTCATGAAACGACAATT
TTGCAGCATGGCGAAACGTTACGGCTTCCCAAACGCAACCGAATTCGCTC
TTGTCGTGGAGGGGATGACGCAGGCGCAGCGACGCGCATGCTTGGAGCGT
TGGTATGCTGAGCGACGGGAAAAGCTTTCTCAACCGTCTTGAATGGGCTC
ACACGTGGAGATCGAGGATACTGACGCGACTACGGTCGGATCGGATGACG
ATGATCTCGATGGGGCACGCCCGTTGGTCTTACAGCCTACTTCGCTTCCT
GTCGCTGATAGAGACCATGTCCCAAAGTCTGAAGTTACGACTCCACGTCG
GCCAACAACTACCCCAACTACGATCAAGCAATCCTCTTCGCCACTCGACA
AGAAGAGCCACACAGTAGTGGAGGTGCTCGACACCGACAGCGGAGATGAC
TCCTTCAATGAGGGCGAGGCCGCTTACAAGGAGTTCAAGAACAGAAAGGC
CACGAAACGGAAACGGAGCACCGCAAACTTAAGAAACCGAGCTACTAAGG
TGACGAGAGTCGCAACCTCGAACTCCATCGTCGGCCGAATCCCAACTTCC
GATGGGAAAGCCCGACCGAGACGGCCATTACGGGTATATGGAGAGGAAGT
GTCATCGGAGGATGAGCTGATGGAACACACCTTACCTGATTATCTCCAGA
AACGGCAATCGCAGTTTGACCGGAGGACAGAGTATCTAAAACAATCTGGG
CTGAAGTTGCCGCCAAGCTACGACGATGTTGAGTTCTCCGACGATGAGAG
GTTGGAATCTTTGGCTGAAAAGCCCGCTTTCGAGAATATGACGCCATGCA
ATCAGTACAAAGACATCACCCTTCCTTATTCGCTGGGGCTTATACCAGCC
CCGATCGCACAGTGGTTGCGCCAGTACCAGGTCGATGGAGCTGCTTTCCT
GCATGAGCTGTTTGTTTACCAGAAGGGTGGGATCCTTGGAGATGACATGG
GTCTGGGAAAGACCGTGCAAGTCATTGCATTTCTCACAGCGGCGTATGGG
AAGACAGGCGATGAGAGAGACGCAAAGCGAATGAGAAAGATGCGGAGAAG
TGGACACGATCAGTGGTATCCCCGAACGTTGATCGTCTGCCCAGGAACCC
TTCTTAAGAATTGGATGGCCGAGCTTGCGCGTTGGGGCTGGTGGCATTTC
GATACATACCATGGTGAAAACAAGGAGCTTGCACTCCAAGCTGCGCGGTC
TGGAAGACTGGAAATCTTGATAACCACTTACAGTACTTATCTTCACAACA
AGGATGCCATCAACATGGTCGATTGGGACTGTGTGATAGCAGACGAATGC
CATATTATCAAGGAGCGCAAGTCAGAAACGACTAAAGCGATGAACATGAT
CAACGCTCTTTGCCGAATCGGCTTGACCGGAACCGCCATTCAGAACAAAT
ACGAGGAGCTTTGGACACTCCTCAACTGGACGAACCCAGGGAAGCTTGGC
CCGGTAACTGTCTGGAAGAAGACCATTTCTGAACCTCTGAAGATTGGCCA
GTCACACGACGCCACCGTCCATCAGCTGCGCAGAGCACGAACGACGGCGA
AGAAGTTGGTGGAGAACCTCTTGCCGCAGTTCTTTCTCCGCCGGATGAAG
ACCCTGATTGCAGACCAGCTTCCCAAGAAGGTTGATCGCGTCGTCTTCTG
CCCGCTCACTGATACCCAGGCCGACGCCTACGTGAACATTCTGGGAAGCG
ACATGGCCAGCTATATCAAACACTCTACCGACCCTTGTGACTGCGGTTCC
CGACAGAAAGCTGGCTGGTGCTGTCGCCAGTTTCTACCATCTGGGGTCAC
CTGGCGAAGCTACGTCTTTCCCGCGATAGCAGTGCTGCAGAAGCTCAGCA
ACCACCTGGCAATTCTCATCCCGCAGGGAGTCGATTCTAACGAGAAACAA
GAAAAGGACAAAGAGATGCTGGAGCTGGCTGTGCCCGAGCAATGGGAAAA
GCTTTACCGTTCCCGGGACTCAATCGTCAACTACGCGAACCCTGAATTCT
GCGGTAAATGGAAGGTTCTTCGTCGACTGCTGAAGTGGTGGCACGCCAAT
GGCGACAAGGTACTCGTTTTCAGCCACAGCGTGCGCCTCCTCAAAATGCT
CCAGATGCTCTTTCACTACACCAGCTATAACGTCAGTTACCTCGATGGGT
CGATGAGCTACGAGGAGCGTACTAAAGTCGTTGATGATTTTAATTCCAAT
CCACGCCAATTCGTCTTCCTCATCTCTACTCGCTCTGGTGGCGTCGGACT
CAACATAACTTCCGCCAACAAGGTCGTCATCGTCGATCCCAACTGGAACC
CCTCGCACGACCTTCAAGCGCAAGATCGCGCCTACCGTATCGGCCAGTCT
CGCGATGTTGAAGTCTTCCGGCTCATCTCCGCCGGCACCATCGAGGAGAT
CGTCTACGCCCGGCAGATCTACAAACAACAACAAGCCAACATTGGCTACA
ACGCAAGCTCGGAACGACGCTACTTCAAGGGTGTTCAAGAGAAGAAAGAC
CAAAAGGGCGAGCTCTTCGGTCTGGACAATCTATTCGAATACAAGAACCA
GAACATCCTTCTCCGCGACATCGTCAACAAAACCAACGTCGCTGAAAGCA
AAGCTGGCGTGCAGGTTATGGACATCGACGTAGACTACGACCCCAATGTC
TCCGACCAAACCTTCACGGGCAAATCCGACGACACCAACGAAGTCATGAG
CCAGTTAGCAGCCATGATTCGCGGCGAGGACGACGAAGAACCCACCCACC
CCCAAACCCCCATCAACACCAAGCATGACCCCATCCAAGCCATCCTCGCC
GGCGCAGGGGTCGAATACACCCACCTCAACAACGAAGTCATCGGGTCATC
CAAAGTCGAGGAGCGGCTCAGCCGTCGCGCCGAACTGGCTGACGAGAATA
ACAAGAACCTAGACATGCAAGTCTTTGCAGGATCCCAGTCCCAGTCCCAG
TCCCAGTCTCATAAAAAGTCATCATCATCTTCAACCAAGCAACCAATCAA
ATACAAGTTTCATCCGCCAAAGCGTGTCATGAAACGACAATTTTGCAGCA
TGGCGAAACGTTACGGCTTCCCAAACGCAACCGAATTCGCTCTTGTCGTG
GAGGGGATGACGCAGGCGCAGCGACGCGCATGCTTGGAGCGTTGGTATGC
TGAGCGACGGGAAAAGCTTTCTCAACCGTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005193-T1.utr5p1 | KJC3_005193-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005193-T1.utr3p1 | KJC3_005193-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR000330 |
| DBxref | InterPro:IPR038718 |
| DBxref | InterPro:IPR029256 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF14773 |
| DBxref | PFAM:PF00176 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1867116..1870624 + |
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