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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1874609..1875634- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005195-T1 ID=KJC3_005195-T1|Name=KJC3_005195-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1026bp|location=Sequence derived from alignment at ch4:1874609..1875634- (Aspergillus niger KJC3)
ATGTCGTCTGCCGCAACCTATACTACCTTTCACGAGGGACTTAGGTCTCC
GGATGTGAAAGTCTCAACCAAAATCCACAGCCCTGCAAGCAATCTTCCTC
CAAAACCTCTACCGTACTGGCTTGTCAACGTTCCCCGCTCACAATGGACA
GCAGAATGTCCCAGCTATCTACGCGACACATCGCAGAAAAATATCGAGGT
GCTTTCGACCCCTGACGAGCAATACCGGAGACAGGGGTGGGAGCTAGTAA
AGGAGATAGTCCGTATGTTCGACCGAATGAAGCCGTGCGTCAGGGGGAGG
ACGTGGTCCGTGAGTGGTCCGCTAATACATGATGGACAGGGTCCAACCAG
ATCGATCGGTTTCAGCGCCTTCCCAGCGATTTGAGGAGGTATCTCGAGTA
CAAGGAGCAGATTATCGCGGAGTATGGATCGATCATGCGGTTTGTGGTGA
AGGAACGGCTTCGCTGGGGAGAAGGGACGCCGGATGATCTGAAGCCCAAG
GGGCGGCCGTTTGAGTATGATGGTTCGTATTCAATTGTCTCTTTCTCACT
GTTCAAATGAGTCTTGAACTGCCTGTGTCGAGATGGGATGAGTGCTAAGC
ATGGTTGTGATGGTCAGAGGATATCCGCATTCTTTACAATGACTGGCCGT
ATGGAGTCGAGGAAGGCATTGTTCACTTGGTGGTGTGGACAAAGTTCGAG
CTGGAGGATGATCCGGTCACGGATGACCTAACGCCACGCGCACGACAGGA
GATCGAGGAGTATGTGCAACGGACATTTCTCTCACGGATGCCAGCCGATC
AGGTATGTATTGGCTAGAATGTTGGAAGGAATGCGCCGGGGGTGGTGATG
GGCGATGCTTTTTCTTGATGCTAATACGAAGGTAGGTCATCTGGTTCAAG
AACTGGAAGTCATTAAAGTCAGTGCATGCCGTGGAGCATTTCCATGTCAT
GCTGCACCATCCCGAAGCGGAATTCCTACGGGAGATCACAGGAGGGGATG
CTCCGCTGAAACGACAGTCGGCATGA back to topCoding sequence (CDS) from alignment at ch4:1874609..1875634- >KJC3_005195-T1 ID=KJC3_005195-T1|Name=KJC3_005195-T1|organism=Aspergillus niger KJC3|type=CDS|length=3084bp|location=Sequence derived from alignment at ch4:1874609..1875634- (Aspergillus niger KJC3)
GTCATCTGGTTCAAGAACTGGAAGTCATTAAAGTCAGTGCATGCCGTGGA
GCATTTCCATGTCATGCTGCACCATCCCGAAGCGGAATTCCTACGGGAGA
TCACAGGAGGGGATGCTCCGCTGAAACGACAGTCGGCATGAAGGATATCC
GCATTCTTTACAATGACTGGCCGTATGGAGTCGAGGAAGGCATTGTTCAC
TTGGTGGTGTGGACAAAGTTCGAGCTGGAGGATGATCCGGTCACGGATGA
CCTAACGCCACGCGCACGACAGGAGATCGAGGAGTATGTGCAACGGACAT
TTCTCTCACGGATGCCAGCCGATCAGGGTCCAACCAGATCGATCGGTTTC
AGCGCCTTCCCAGCGATTTGAGGAGGTATCTCGAGTACAAGGAGCAGATT
ATCGCGGAGTATGGATCGATCATGCGGTTTGTGGTGAAGGAACGGCTTCG
CTGGGGAGAAGGGACGCCGGATGATCTGAAGCCCAAGGGGCGGCCGTTTG
AGTATGATGATGTCGTCTGCCGCAACCTATACTACCTTTCACGAGGGACT
TAGGTCTCCGGATGTGAAAGTCTCAACCAAAATCCACAGCCCTGCAAGCA
ATCTTCCTCCAAAACCTCTACCGTACTGGCTTGTCAACGTTCCCCGCTCA
CAATGGACAGCAGAATGTCCCAGCTATCTACGCGACACATCGCAGAAAAA
TATCGAGGTGCTTTCGACCCCTGACGAGCAATACCGGAGACAGGGGTGGG
AGCTAGTAAAGGAGATAGTCCGTCATCTGGTTCAAGAACTGGAAGTCATT
AAAGTCAGTGCATGCCGTGGAGCATTTCCATGTCATGCTGCACCATCCCG
AAGCGGAATTCCTACGGGAGATCACAGGAGGGGATGCTCCGCTGAAACGA
CAGTCGGCATGAAGGATATCCGCATTCTTTACAATGACTGGCCGTATGGA
GTCGAGGAAGGCATTGTTCACTTGGTGGTGTGGACAAAGTTCGAGCTGGA
GGATGATCCGGTCACGGATGACCTAACGCCACGCGCACGACAGGAGATCG
AGGAGTATGTGCAACGGACATTTCTCTCACGGATGCCAGCCGATCAGGGT
CCAACCAGATCGATCGGTTTCAGCGCCTTCCCAGCGATTTGAGGAGGTAT
CTCGAGTACAAGGAGCAGATTATCGCGGAGTATGGATCGATCATGCGGTT
TGTGGTGAAGGAACGGCTTCGCTGGGGAGAAGGGACGCCGGATGATCTGA
AGCCCAAGGGGCGGCCGTTTGAGTATGATGATGTCGTCTGCCGCAACCTA
TACTACCTTTCACGAGGGACTTAGGTCTCCGGATGTGAAAGTCTCAACCA
AAATCCACAGCCCTGCAAGCAATCTTCCTCCAAAACCTCTACCGTACTGG
CTTGTCAACGTTCCCCGCTCACAATGGACAGCAGAATGTCCCAGCTATCT
ACGCGACACATCGCAGAAAAATATCGAGGTGCTTTCGACCCCTGACGAGC
AATACCGGAGACAGGGGTGGGAGCTAGTAAAGGAGATAGTCCGTCATCTG
GTTCAAGAACTGGAAGTCATTAAAGTCAGTGCATGCCGTGGAGCATTTCC
ATGTCATGCTGCACCATCCCGAAGCGGAATTCCTACGGGAGATCACAGGA
GGGGATGCTCCGCTGAAACGACAGTCGGCATGAAGGATATCCGCATTCTT
TACAATGACTGGCCGTATGGAGTCGAGGAAGGCATTGTTCACTTGGTGGT
GTGGACAAAGTTCGAGCTGGAGGATGATCCGGTCACGGATGACCTAACGC
CACGCGCACGACAGGAGATCGAGGAGTATGTGCAACGGACATTTCTCTCA
CGGATGCCAGCCGATCAGGGTCCAACCAGATCGATCGGTTTCAGCGCCTT
CCCAGCGATTTGAGGAGGTATCTCGAGTACAAGGAGCAGATTATCGCGGA
GTATGGATCGATCATGCGGTTTGTGGTGAAGGAACGGCTTCGCTGGGGAG
AAGGGACGCCGGATGATCTGAAGCCCAAGGGGCGGCCGTTTGAGTATGAT
GATGTCGTCTGCCGCAACCTATACTACCTTTCACGAGGGACTTAGGTCTC
CGGATGTGAAAGTCTCAACCAAAATCCACAGCCCTGCAAGCAATCTTCCT
CCAAAACCTCTACCGTACTGGCTTGTCAACGTTCCCCGCTCACAATGGAC
AGCAGAATGTCCCAGCTATCTACGCGACACATCGCAGAAAAATATCGAGG
TGCTTTCGACCCCTGACGAGCAATACCGGAGACAGGGGTGGGAGCTAGTA
AAGGAGATAGTCCGTCATCTGGTTCAAGAACTGGAAGTCATTAAAGTCAG
TGCATGCCGTGGAGCATTTCCATGTCATGCTGCACCATCCCGAAGCGGAA
TTCCTACGGGAGATCACAGGAGGGGATGCTCCGCTGAAACGACAGTCGGC
ATGAAGGATATCCGCATTCTTTACAATGACTGGCCGTATGGAGTCGAGGA
AGGCATTGTTCACTTGGTGGTGTGGACAAAGTTCGAGCTGGAGGATGATC
CGGTCACGGATGACCTAACGCCACGCGCACGACAGGAGATCGAGGAGTAT
GTGCAACGGACATTTCTCTCACGGATGCCAGCCGATCAGGGTCCAACCAG
ATCGATCGGTTTCAGCGCCTTCCCAGCGATTTGAGGAGGTATCTCGAGTA
CAAGGAGCAGATTATCGCGGAGTATGGATCGATCATGCGGTTTGTGGTGA
AGGAACGGCTTCGCTGGGGAGAAGGGACGCCGGATGATCTGAAGCCCAAG
GGGCGGCCGTTTGAGTATGATGATGTCGTCTGCCGCAACCTATACTACCT
TTCACGAGGGACTTAGGTCTCCGGATGTGAAAGTCTCAACCAAAATCCAC
AGCCCTGCAAGCAATCTTCCTCCAAAACCTCTACCGTACTGGCTTGTCAA
CGTTCCCCGCTCACAATGGACAGCAGAATGTCCCAGCTATCTACGCGACA
CATCGCAGAAAAATATCGAGGTGCTTTCGACCCCTGACGAGCAATACCGG
AGACAGGGGTGGGAGCTAGTAAAGGAGATAGTCC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022036 |
| DBxref | PFAM:PF12239 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1874609..1875634 - |
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