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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1885089..1886793+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005200-T1 ID=KJC3_005200-T1|Name=KJC3_005200-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1705bp|location=Sequence derived from alignment at ch4:1885089..1886793+ (Aspergillus niger KJC3)
GTGAAAAACCATGCAGAGTGAAAGGAAAGGATTGATGGTAACGAACTGAA
CGGTAAACTCCCCTTCTACGATCTGGGCCTGGCCTGGCCTTTCTGTTCCC
CCCTCTGGCTTTTCTTATTATTATCTCCTCTTTCCCCCCCGGCTCTTCCC
TTCTTCTTCTTCCTCTCCCTCCCTCTTTGCTCTGCAACTGCTTTGCTCTC
CTTCTCGGGTACACATCTCACTCCTTTGTGTGTGTTTGTTTCAAGGCTGA
GCGTCCCCTTGGTATTGCTCGCGTCATTCATTACTTCCCAATCTACTCAC
TCTCTTTCATCAATCGTGTACCCTGAAACGGTTGCTTTGTTCCAAGAAAA
CACCTGTGATACCCATTCAGTTCAATATCTATCAACACAAACATCATGCA
GCTCAAGAACTCCATGCTCCTGCTGGCCGCTTTGACGGCTGGCTCCGCTA
CTGCTCGCCTGCACGGCCATGAACGCCGTCACCACCACAACGACAAGCGT
GACGTCGGTGATGTCGTCGTTGCTACTATCGACGGTCAAAAGGTCTCCTG
GATCAACGAGTGGTCCGGTGTCGCCGCCACCACCGTCTCTGAGGCTGCTA
CTACTCAGGTGTCTGTTGAAGCTGCCGCCACCCAGGTCTCCGTCGCCAGC
TCCGTCATCGCCTCCGTCTCGGCGGTTCCTTCTGCTTCCAGCTCTTCCGG
CGCAGCCACTGCTAGCGGATCCTGCTCAAGCTGGACCGACACCCTGTCGT
CCGGCGATTACTCTCGCGCCGGCTTCGGCAAGTCCACGGTTAGCAAGCGC
ACCACCGACGCCATCTACTACACCGGCAATGTCGGCAGCCCTTGGGGTAG
CAACATCATCGAGGTCGACGCCTCGAACGCCTGCCAGTACAAGCACGTTG
TCCGCATCGACGGCAGTGAGACTGATGACTGGACCGTCGTCTTCTGGAAC
AAGATCGGACCCGATGGAGGTCTGAACGGCTGGTACGGCAACTCTGCTCT
GACCCTGACCATCAAGCCCGGTACTTCCCGCTACGTCGCCTTCGACGATG
ACTCTCAGGGTGGCTGGGGTGCTGCCAAGGGTGACAAGCTCCCCACTGAC
CAGTACGGCGGTTACTCCTGCACCTGGGGTGAATTTGACTTCGGTAACAC
TAGCAACGAGGGCTGGTCCGGCTGGGATGTGTCTGCCATCCAGGCTCAGA
ACGCTGGCCAGGAGATCCAGGGTATGAAGATCTGCGACCACCAGGGCACC
GGATGCTCCAGTATCTCCAAGGCGGCCAGCAGCGTCATCAACGCCTACAC
TGCTGCCCTTGCTGCTGCCGATGGCATCGGTGGTTCCCTGTCCTCCGGCC
CCGTCCGTCTCCAGGTCACCATCGACTTCGAATAGACGTGTCTCGTCATC
GATTCGTTCAGATTTCTTTTTCTTTTCTCTTCAAATATTCCCTTCGGTAA
ACTTGGCTTGGGGTTAGGGTGTTTTTGTGTGTGTGCAGGCCTGCACCGGG
TCCTTCGGGGTCTGTCCCTCGCAGCTGGAAGTGAGGGTTACATTGCACGT
CCGACCCTTGCCGTGCTGCTAGGATCTGCTTGCTTGATACGTTCGATTGT
ACATACATCCATATACCACCGTGATTATTGAGTTATGAGTAACTTCAGTA
TACTCGATCAAGTTCTAGTGTATATTTTTAATTCTTAAACTTTATACTGT
AACCG back to topCoding sequence (CDS) from alignment at ch4:1885089..1886793+ >KJC3_005200-T1 ID=KJC3_005200-T1|Name=KJC3_005200-T1|organism=Aspergillus niger KJC3|type=CDS|length=990bp|location=Sequence derived from alignment at ch4:1885089..1886793+ (Aspergillus niger KJC3)
ATGCAGCTCAAGAACTCCATGCTCCTGCTGGCCGCTTTGACGGCTGGCTC
CGCTACTGCTCGCCTGCACGGCCATGAACGCCGTCACCACCACAACGACA
AGCGTGACGTCGGTGATGTCGTCGTTGCTACTATCGACGGTCAAAAGGTC
TCCTGGATCAACGAGTGGTCCGGTGTCGCCGCCACCACCGTCTCTGAGGC
TGCTACTACTCAGGTGTCTGTTGAAGCTGCCGCCACCCAGGTCTCCGTCG
CCAGCTCCGTCATCGCCTCCGTCTCGGCGGTTCCTTCTGCTTCCAGCTCT
TCCGGCGCAGCCACTGCTAGCGGATCCTGCTCAAGCTGGACCGACACCCT
GTCGTCCGGCGATTACTCTCGCGCCGGCTTCGGCAAGTCCACGGTTAGCA
AGCGCACCACCGACGCCATCTACTACACCGGCAATGTCGGCAGCCCTTGG
GGTAGCAACATCATCGAGGTCGACGCCTCGAACGCCTGCCAGTACAAGCA
CGTTGTCCGCATCGACGGCAGTGAGACTGATGACTGGACCGTCGTCTTCT
GGAACAAGATCGGACCCGATGGAGGTCTGAACGGCTGGTACGGCAACTCT
GCTCTGACCCTGACCATCAAGCCCGGTACTTCCCGCTACGTCGCCTTCGA
CGATGACTCTCAGGGTGGCTGGGGTGCTGCCAAGGGTGACAAGCTCCCCA
CTGACCAGTACGGCGGTTACTCCTGCACCTGGGGTGAATTTGACTTCGGT
AACACTAGCAACGAGGGCTGGTCCGGCTGGGATGTGTCTGCCATCCAGGC
TCAGAACGCTGGCCAGGAGATCCAGGGTATGAAGATCTGCGACCACCAGG
GCACCGGATGCTCCAGTATCTCCAAGGCGGCCAGCAGCGTCATCAACGCC
TACACTGCTGCCCTTGCTGCTGCCGATGGCATCGGTGGTTCCCTGTCCTC
CGGCCCCGTCCGTCTCCAGGTCACCATCGACTTCGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005200-T1.utr5p1 | KJC3_005200-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005200-T1.utr3p1 | KJC3_005200-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1885089..1886793 + |
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