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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1971520..1973646- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005221-T1 ID=KJC3_005221-T1|Name=KJC3_005221-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2127bp|location=Sequence derived from alignment at ch4:1971520..1973646- (Aspergillus niger KJC3)
CAATAAACAGATTTTACAGGGCTATTCTTTGTGCACATAATTTCCGCCGG
TTTCAGGAAATCGGTGTCATACGATGGCTCTTTGCTCCGGACTACTCAGT
ACACTGAGTTGGCAATACTAGCAAATCGGACTGTCTTGCAGATATACACC
TTGCCAACCACTTCAGAACACATTCTAGTGATGACAATGAATGTGTAATC
TGAGACAACATTATGGGACTTTGGCACCGTGAATGACAATTGCCAACTTA
GTGGTAGATCTCATCAGTGATCTTTCTGACGTTGGATTTCTTCCCGATGC
AGGCTATTTATATATAAAGGCTGAGTACTAGTTGAGTCCCAAGTCATGGA
GCGCCAACGTTCAAGGTCCAAAATGCTCCAATATCATGAATGATACAGCT
GTTTTTCACAACTAGTATTGTGCTAGAAAGAAGGCTTCAAGTTACTATTG
ACTCTAGACGGCTTTTCCCGTCTTCCTTCTGATCTTTTGACTCTATTTCC
ATACTACCATCATGCCTTCCCCATACTATCGCAAGTATTCCGCCCTTTTG
ACGGATAACTAAGGTTTGGCAAGGCCTCGGGTTCGAGCCCCGGCTCGGAT
CTTCGCCCTTTTCCTCTCCTGGCTGCGCTCTAGACTAAAGCGGTATGGCG
GTCGGTCAAGTGCCTTTGCGGTCGGTCTCCGCATGCTCCAGCCAATTCTT
CTCCATATATTCCTCAATACTCTTACCTATTAACCGCGCATTCTATCTGG
CAATTGGACCATTACTCTTCCGAAAAAGGACGCCTTCACTGCACTCACAC
CATGGGCTGGTTTTGGGGTGGCTCGAACAAGGACGACCCGGTCAAAAAGC
TTGACCCGGGCTTGCGAGAATACCTCGAGCATGAAGCTCCAGAGAAATAC
GTCCCAACCACTTCAGTCCCCTCATCGCAGGACCCCTCCAAGACGGTACC
CCAAGATGCGAAGCCATCTGTCAGCGCCGAGCCTTCCGAACCCGCCCTTC
CCTCCGCTTCTCTATTCCAAGATGGCCGTTATGCGCATCTCTGGAAGACC
TACAAGCCGCCCCAGGAAAAGGAAGCGACGGAACAGAAGACTGCAGAGCG
AGTGATTGAGAAGTACAAGCAGCGCGGTGATACCGTGCACCGTGCGGCGA
TGGAAAATTGCGCCCTGGAGCATGAGGACTTGACATACTGCTTCCAGACT
GGCAATTGGGAGAAACGATTGCGGGCCCGTGTGACTCTGTGCTCTGAGGA
AAACGCTAAGTTCTCTCGTTGTTTTACCACCCAGGCTGTAAGTGCAGGCA
CAGTTAAACCGGCTCTTTTCTTTCCCTGCGATGCCTGAGCTGTTGTCGGT
CGGTATATGCTGACGGTCATCCAGAAATTCCTCCAGGCGCTAGGATACGC
TTCCTCCTTCAACTGGGACGAGGAAAGGGAAGAACGGATTCAGATGCACG
CCGATAAGCTCTACCATCAGATGCTTGACTACGAGAAACGGGCCGAAGAA
GCACGGAAAGCTGGACAGGAGCCCCCGCCTCTCACTTCTCTCTTCAACCC
CCAGGCAGAGGCACAGCAGACACCTGCCAACGCACCAGGAGCCCTGGAGA
TTCCTGGAGGTGAGACGATCCCGACAGGACTGAAACCGTCCAAACCGTTG
GCACAGCTTACTCCACATGAACGAGAATTGGAGATCCGAGCACACAATGC
GCAGCTGGAGCAACAGAAATTGTACGTACAGGAGGCATCGCCATTCATGC
AGACACACGAGGACGCACGGCAAAAGCGCAGAGAGAAAGCCGTCAGCTGG
TTCGGCGAGACGATTGGCCGCTGGGTTACATAAAGCATATGCGTGGTGCT
TCCATTATGGACTGGATCTTTCTCTTCTCTTGTGTATGATTACCCCATTT
GTCACCCCCTCCAGTAGGAGTTATGATTTAGAAGCGAGTCTGCGACAATC
GACGTTGTTACGCATGGATATGCAGGGCCAACGGATTCCAGGGTGCTTTT
TTACCCTTCCAATAGGAATGCAGGGAGAAGCCAATGAAAGTAAACCCAAA
GTAAACGCAAGAGAAGCGATCCCTCAGGTACCGTCGCTGGGTATATATCT
GCTTGCTATACACCTTTGAGCTAGGAG back to topCoding sequence (CDS) from alignment at ch4:1971520..1973646- >KJC3_005221-T1 ID=KJC3_005221-T1|Name=KJC3_005221-T1|organism=Aspergillus niger KJC3|type=CDS|length=1890bp|location=Sequence derived from alignment at ch4:1971520..1973646- (Aspergillus niger KJC3)
AAATTCCTCCAGGCGCTAGGATACGCTTCCTCCTTCAACTGGGACGAGGA
AAGGGAAGAACGGATTCAGATGCACGCCGATAAGCTCTACCATCAGATGC
TTGACTACGAGAAACGGGCCGAAGAAGCACGGAAAGCTGGACAGGAGCCC
CCGCCTCTCACTTCTCTCTTCAACCCCCAGGCAGAGGCACAGCAGACACC
TGCCAACGCACCAGGAGCCCTGGAGATTCCTGGAGGTGAGACGATCCCGA
CAGGACTGAAACCGTCCAAACCGTTGGCACAGCTTACTCCACATGAACGA
GAATTGGAGATCCGAGCACACAATGCGCAGCTGGAGCAACAGAAATTGTA
CGTACAGGAGGCATCGCCATTCATGCAGACACACGAGGACGCACGGCAAA
AGCGCAGAGAGAAAGCCGTCAGCTGGTTCGGCGAGACGATTGGCCGCTGG
GTTACATAAATGGGCTGGTTTTGGGGTGGCTCGAACAAGGACGACCCGGT
CAAAAAGCTTGACCCGGGCTTGCGAGAATACCTCGAGCATGAAGCTCCAG
AGAAATACGTCCCAACCACTTCAGTCCCCTCATCGCAGGACCCCTCCAAG
ACGGTACCCCAAGATGCGAAGCCATCTGTCAGCGCCGAGCCTTCCGAACC
CGCCCTTCCCTCCGCTTCTCTATTCCAAGATGGCCGTTATGCGCATCTCT
GGAAGACCTACAAGCCGCCCCAGGAAAAGGAAGCGACGGAACAGAAGACT
GCAGAGCGAGTGATTGAGAAGTACAAGCAGCGCGGTGATACCGTGCACCG
TGCGGCGATGGAAAATTGCGCCCTGGAGCATGAGGACTTGACATACTGCT
TCCAGACTGGCAATTGGGAGAAACGATTGCGGGCCCGTGTGACTCTGTGC
TCTGAGGAAAACGCTAAGTTCTCTCGTTGTTTTACCACCCAGGCTAAATT
CCTCCAGGCGCTAGGATACGCTTCCTCCTTCAACTGGGACGAGGAAAGGG
AAGAACGGATTCAGATGCACGCCGATAAGCTCTACCATCAGATGCTTGAC
TACGAGAAACGGGCCGAAGAAGCACGGAAAGCTGGACAGGAGCCCCCGCC
TCTCACTTCTCTCTTCAACCCCCAGGCAGAGGCACAGCAGACACCTGCCA
ACGCACCAGGAGCCCTGGAGATTCCTGGAGGTGAGACGATCCCGACAGGA
CTGAAACCGTCCAAACCGTTGGCACAGCTTACTCCACATGAACGAGAATT
GGAGATCCGAGCACACAATGCGCAGCTGGAGCAACAGAAATTGTACGTAC
AGGAGGCATCGCCATTCATGCAGACACACGAGGACGCACGGCAAAAGCGC
AGAGAGAAAGCCGTCAGCTGGTTCGGCGAGACGATTGGCCGCTGGGTTAC
ATAAATGGGCTGGTTTTGGGGTGGCTCGAACAAGGACGACCCGGTCAAAA
AGCTTGACCCGGGCTTGCGAGAATACCTCGAGCATGAAGCTCCAGAGAAA
TACGTCCCAACCACTTCAGTCCCCTCATCGCAGGACCCCTCCAAGACGGT
ACCCCAAGATGCGAAGCCATCTGTCAGCGCCGAGCCTTCCGAACCCGCCC
TTCCCTCCGCTTCTCTATTCCAAGATGGCCGTTATGCGCATCTCTGGAAG
ACCTACAAGCCGCCCCAGGAAAAGGAAGCGACGGAACAGAAGACTGCAGA
GCGAGTGATTGAGAAGTACAAGCAGCGCGGTGATACCGTGCACCGTGCGG
CGATGGAAAATTGCGCCCTGGAGCATGAGGACTTGACATACTGCTTCCAG
ACTGGCAATTGGGAGAAACGATTGCGGGCCCGTGTGACTCTGTGCTCTGA
GGAAAACGCTAAGTTCTCTCGTTGTTTTACCACCCAGGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005221-T1.utr3p1 | KJC3_005221-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005221-T1.utr5p1 | KJC3_005221-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1971520..1973646 - |
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