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KJC3_005225-T1, KJC3_005225-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005225-T1
Unique NameKJC3_005225-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1990915..1991894+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005225-T1 ID=KJC3_005225-T1|Name=KJC3_005225-T1|organism=Aspergillus niger KJC3|type=mRNA|length=980bp|location=Sequence derived from alignment at ch4:1990915..1991894+ (Aspergillus niger KJC3)
ATGTCTGCTGAACACCCTATTGAGAAGGATATGGCTCCTGAGAACGGCAG
CAATGGCAGTGCTCCCTTGACCCACGAGTTGACCGCTGAGGAAACCGCCA
GAGCTGCTGCGCGTTTCGGCTACGGACCCATGGCTCACGTCAACACCAAG
GAGGCCAACCTGCGCCCCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAA
GTCGGTCGAGCAGCGCAAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCG
CTTTCGCCCTCACCACTTTCCTCCTGAGTTTGATCAACATGGGAACCCGT
GGTATCTCTGCGAACAACATTGTCGTTGGTCTGGCTTTCGGATATGGTGG
TCTCGTTCAGTTGCTTGCTGGCATGTGGTAGGTACACCCCGTTACCACAA
CTCCCAAGATGAATTATGCTGATCGTTATTGATAGGGAAATGGCTGTCGG
AAACACCTTCGGTGCCACTGCTCTGTCCTCCTACGGAGGTTTCTGGATCT
CTTTCGCCATTGTCTTGACCCCCGGTGGGTTCGAGATCGAGTCGTCGATT
GAATCCGCCGGTGGCGCCACCATGTTCTACAACTCAATGGGACTGTACCT
GCTGGTAAGTTTTGAGCAATGGCTGGGAGAGTGAGCATCGCGCTAACTGT
CCTCCTTAGGGCTGGTTCATCTTCACCACTATCCTGCTGTTCTGCACCTT
GAGGTCCACTGTCGCCTTCTTCTGCCTCTTCCTGTTCCTGGACCTGACCT
TCTTGCTGCTTGGTGTTGGTTACCTGCAGCGGAACTCTGCTGGCGAGCCC
AACACTCCCGTCATCAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTGCATT
CGCCGCTTGGTACAACGCCCTGGCTGGTATTGCCGACAGCAGCAACAGCT
TCTTCATCATCCCTGTTGCTCACTTCCCCTGGTCTCCCACTGCCCGTAGC
CGTGCTAAGACCCCTCGTGAGACCGTCTAA
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Coding sequence (CDS) from alignment at ch4:1990915..1991894+

>KJC3_005225-T1 ID=KJC3_005225-T1|Name=KJC3_005225-T1|organism=Aspergillus niger KJC3|type=CDS|length=2601bp|location=Sequence derived from alignment at ch4:1990915..1991894+ (Aspergillus niger KJC3)
ATGTCTGCTGAACACCCTATTGAGAAGGATATGGCTCCTGAGAACGGCAG
CAATGGCAGTGCTCCCTTGACCCACGAGTTGACCGCTGAGGAAACCGCCA
GAGCTGCTGCGCGTTTCGGCTACGGACCCATGGCTCACGTCAACACCAAG
GAGGCCAACCTGCGCCCCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAA
GTCGGTCGAGCAGCGCAAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCG
CTTTCGCCCTCACCACTTTCCTCCTGAGTTTGATCAACATGGGAACCCGT
GGTATCTCTGCGAACAACATTGTCGTTGGTCTGGCTTTCGGATATGGTGG
TCTCGTTCAGTTGCTTGCTGGCATGTGGGAAATGGCTGTCGGAAACACCT
TCGGTGCCACTGCTCTGTCCTCCTACGGAGGTTTCTGGATCTCTTTCGCC
ATTGTCTTGACCCCCGGTGGGTTCGAGATCGAGTCGTCGATTGAATCCGC
CGGTGGCGCCACCATGTTCTACAACTCAATGGGACTGTACCTGCTGGGCT
GGTTCATCTTCACCACTATCCTGCTGTTCTGCACCTTGAGGTCCACTGTC
GCCTTCTTCTGCCTCTTCCTGTTCCTGGACCTGACCTTCTTGCTGCTTGG
TGTTGGTTACCTGCAGCGGAACTCTGCTGGCGAGCCCAACACTCCCGTCA
TCAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTGCATTCGCCGCTTGGTAC
AACGCCCTGGCTGGTATTGCCGACAGCAGCAACAGCTTCTTCATCATCCC
TGTTGCTCACTTCCCCTGGTCTCCCACTGCCCGTAGCCGTGCTAAGACCC
CTCGTGAGACCGTCTAAATGTCTGCTGAACACCCTATTGAGAAGGATATG
GCTCCTGAGAACGGCAGCAATGGCAGTGCTCCCTTGACCCACGAGTTGAC
CGCTGAGGAAACCGCCAGAGCTGCTGCGCGTTTCGGCTACGGACCCATGG
CTCACGTCAACACCAAGGAGGCCAACCTGCGCCCCTTCGGAGGTGAATTC
CAGCCTGGTCTGTACAAGTCGGTCGAGCAGCGCAAGTTCGCCAACCCGGC
GCCTCTGGGTCTCTGCGCTTTCGCCCTCACCACTTTCCTCCTGAGTTTGA
TCAACATGGGAACCCGTGGTATCTCTGCGAACAACATTGTCGTTGGTCTG
GCTTTCGGATATGGTGGTCTCGTTCAGTTGCTTGCTGGCATGTGGGAAAT
GGCTGTCGGAAACACCTTCGGTGCCACTGCTCTGTCCTCCTACGGAGGTT
TCTGGATCTCTTTCGCCATTGTCTTGACCCCCGGTGGGTTCGAGATCGAG
TCGTCGATTGAATCCGCCGGTGGCGCCACCATGTTCTACAACTCAATGGG
ACTGTACCTGCTGGGCTGGTTCATCTTCACCACTATCCTGCTGTTCTGCA
CCTTGAGGTCCACTGTCGCCTTCTTCTGCCTCTTCCTGTTCCTGGACCTG
ACCTTCTTGCTGCTTGGTGTTGGTTACCTGCAGCGGAACTCTGCTGGCGA
GCCCAACACTCCCGTCATCAAGGCGGGTGGTTTCTTCGGTCTCCTGGCTG
CATTCGCCGCTTGGTACAACGCCCTGGCTGGTATTGCCGACAGCAGCAAC
AGCTTCTTCATCATCCCTGTTGCTCACTTCCCCTGGTCTCCCACTGCCCG
TAGCCGTGCTAAGACCCCTCGTGAGACCGTCTAAATGTCTGCTGAACACC
CTATTGAGAAGGATATGGCTCCTGAGAACGGCAGCAATGGCAGTGCTCCC
TTGACCCACGAGTTGACCGCTGAGGAAACCGCCAGAGCTGCTGCGCGTTT
CGGCTACGGACCCATGGCTCACGTCAACACCAAGGAGGCCAACCTGCGCC
CCTTCGGAGGTGAATTCCAGCCTGGTCTGTACAAGTCGGTCGAGCAGCGC
AAGTTCGCCAACCCGGCGCCTCTGGGTCTCTGCGCTTTCGCCCTCACCAC
TTTCCTCCTGAGTTTGATCAACATGGGAACCCGTGGTATCTCTGCGAACA
ACATTGTCGTTGGTCTGGCTTTCGGATATGGTGGTCTCGTTCAGTTGCTT
GCTGGCATGTGGGAAATGGCTGTCGGAAACACCTTCGGTGCCACTGCTCT
GTCCTCCTACGGAGGTTTCTGGATCTCTTTCGCCATTGTCTTGACCCCCG
GTGGGTTCGAGATCGAGTCGTCGATTGAATCCGCCGGTGGCGCCACCATG
TTCTACAACTCAATGGGACTGTACCTGCTGGGCTGGTTCATCTTCACCAC
TATCCTGCTGTTCTGCACCTTGAGGTCCACTGTCGCCTTCTTCTGCCTCT
TCCTGTTCCTGGACCTGACCTTCTTGCTGCTTGGTGTTGGTTACCTGCAG
CGGAACTCTGCTGGCGAGCCCAACACTCCCGTCATCAAGGCGGGTGGTTT
CTTCGGTCTCCTGGCTGCATTCGCCGCTTGGTACAACGCCCTGGCTGGTA
TTGCCGACAGCAGCAACAGCTTCTTCATCATCCCTGTTGCTCACTTCCCC
TGGTCTCCCACTGCCCGTAGCCGTGCTAAGACCCCTCGTGAGACCGTCTA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005225KJC3_005225Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005225-T1.exon1KJC3_005225-T1.exon1Aspergillus niger KJC3exon
KJC3_005225-T1.exon2KJC3_005225-T1.exon2Aspergillus niger KJC3exon
KJC3_005225-T1.exon3KJC3_005225-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005225-T1.cdsKJC3_005225-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005225-T1KJC3_005225-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000791
DBxrefPFAM:PF01184
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1990915..1991894 +
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