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KJC3_005232-T1, KJC3_005232-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005232-T1
Unique NameKJC3_005232-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2025095..2027560-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005232-T1 ID=KJC3_005232-T1|Name=KJC3_005232-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2466bp|location=Sequence derived from alignment at ch4:2025095..2027560- (Aspergillus niger KJC3)
CCCTTATTTATTCCCTATAGGCTGTTCCTCCGGTTCCTCTGGATTGAAGT
TAATTGCAGAAGGAAATTTGCCAATCGCCTTGCGTTGCTCGTGATCACCC
CCAATTCCTGCCTGATTTCACCTGGTAATACTGGAGCCTCTCAATCGGGT
TTAGTGCTGGTCTAGTCTCGACGTCACGAACGAGACTCTAGAGTTGCAAC
CAAAGCATTTCATTTCCAGCCCAACTCGCTCCACTCTCCCTCCCCAGCCT
TCAAAGGGGAAAAAGCACCCAAAAGCCCACTCCTTTCCCACCCCGGCTCA
AGTGAAAGGAAATTCGAAAGTGTCATTGATCCATCTACTTCATCGGCTCT
CAAGCGTGGTTCCTTACCTTCATCACCACTCACCCACCTTTCCACTGCGG
ACCATCTCGTGTCTCGATCTCGGACCCGTTGCATTGCCCACCCTCTCGCC
TTGATTCCTCTTCCGTCGCATCCCGTTGCGCCCTCTGACACACGTCACTC
CTGCGCAAAGAAATCTCTTGAAAGCTACCGCCTCGTCCGATTCGCAGCCA
ATCTCGGTGGCTTTCTTCTCTATTCCTTCGTTTCATCCCTTGTGTCTAAC
ATTTCGCACTCGGACAATTCGCCATGCATCGCACCTATTCTATGCGCCAG
TCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCCGCCATTGTC
TTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTGGTGAGTCGT
CTCCTGGAATGGTCGGGTCTTTGTTCTGGATGGAGGCCAATGGCTCTGGT
CACTCCCCTATGCTAGGGGTCTGGACAACTGCTATTTGCTGAGAATAGGC
TGGGCCTTGTATGGTGATTATACTGACATGTGTCAATCCAGGCCATGCCT
TGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAGAAAACTC
TCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGGAGATGGT
CTCTAGGGAGCGTATGGAAACTGCTGTATGTTCGCGTACTGGCCTCTACT
TGTGAAGTACGACAACTAATTTATGGTGCTTGGCAGCAACAACTCTCCAT
CTGGGGTGAAAACTGCGACGAAGATGTTTCCGATGTCACCGACAAGCTGG
GCGTCTTGCTCTACGAGATTGGCGAATTGGAAGATCTCTTCGTCGACCGC
TATGACCAGTACCGTGTCACCATCAAGAGCATCCGCAACATTGAGGCTTC
TGTTCAGCCCAGCCGCGACCGTATGTGCTCTCTGTTCCAAGCTACGGAGT
TTCAATACTAACGTGCATACGCTTATAGGCAAGCAGAAGATCACCGATGA
AATTGCTAAGCTCAAGTACAAGGACCCCAACTCTCCCCGCATCGTCGTTC
TGGAGCAAGAGCTTGTCCGTGCCGAGGCCGAATCCCTCGTGGCCGAAGCC
CAGCTCTCCAACATCACTCGTGAGAAGCTCAAGGCAGCCTTCCAGTACCA
GTTCGATGCGCTCAGGGAGCATTGCGAGAAGGTGGCCCTCATCGCTGGTT
ACGGCAAGCACCTCTTGGACCTGGTTGATGACACGCCGGTTACTCCCGGC
GAAACTCGCCATGCCTATGATGGCTATGACGCCAGCAAAGCTATCATCCA
AGACTGTGAGGAAGCCCTTGCCAACTGGGTTACCTCCAAGGCATCGGTCA
AGCCCACTCTCTCGCAGCGCTCGCGCACCCTGTCCCAGCGTCACCGTGAG
ACCCTCAAGGGCCGTGAAGGCGTCGATCTTTCCGGACAGGACCAGCCCAT
GGGCCGTGACTCTTGGGTACCCGCGGATCAGCATGCGACCTACCAGCACG
AGGTAGAGGACGGTGAGGAAGTGGCCAGCACCGTTGATGGAGAGTCGCGG
GGTCGAGAAGAGGAGCGGGAGCCCGTCACGGTGTCTGTTTAAATTAGGAT
GAGAAAGTGGTGAAGACCAGTTTACCTTGGTGGATCATATACGCTCTTTG
AGACCGCCAGAGTACTGATCGATTCTCTCATCTTTGTCTCTATATTTGCG
GTTTGAGATTCCCGCTTGATATGTTGTTGTTCTTCCTTGATGACTTTTGT
GTTTCTTTACCCCTAACGAGTTTCCTGTTACCTTACGATTAATTCAACCC
CTGACGACGCATGTCCCGACCCTAATATCGAGACATTCTCCTGTTGGTGA
AGGAATTGGAATCCTACACGAGCGGTGAAAAATGTTCGCGATCCAAGGAG
ACATAGCCGGGTCAAAGGGGAACTTACTCTATTGTCGAACTGATTAATGT
ATTACTATACCACCTGCGAGGAGGATGGGGACAGAGAGAAGGGGAGAGAA
GGAGAGAGAGAGTATCTATAATTGATGCATTCCTTGAGTTCGTCTCGTGC
TCGTGGTTTGAATCCGTGTGTTTTGGGATAGGAGTAGGTACTTAATGGAC
TTGTTAATGAGCTGTG
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Coding sequence (CDS) from alignment at ch4:2025095..2027560-

>KJC3_005232-T1 ID=KJC3_005232-T1|Name=KJC3_005232-T1|organism=Aspergillus niger KJC3|type=CDS|length=4200bp|location=Sequence derived from alignment at ch4:2025095..2027560- (Aspergillus niger KJC3)
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PIL1KJC3_005232Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005232-T1KJC3_005232-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005232-T1.cdsKJC3_005232-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005232-T1.utr3p1KJC3_005232-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005232-T1.exon4KJC3_005232-T1.exon4Aspergillus niger KJC3exon
KJC3_005232-T1.exon3KJC3_005232-T1.exon3Aspergillus niger KJC3exon
KJC3_005232-T1.exon2KJC3_005232-T1.exon2Aspergillus niger KJC3exon
KJC3_005232-T1.exon1KJC3_005232-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005232-T1.utr5p1KJC3_005232-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR028245
DBxrefInterPro:IPR027267
DBxrefPFAM:PF13805
ProductEisosome core component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2025095..2027560 -
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