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KJC3_005246-T1, KJC3_005246-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005246-T1
Unique NameKJC3_005246-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2078610..2080687-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005246-T1 ID=KJC3_005246-T1|Name=KJC3_005246-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2078bp|location=Sequence derived from alignment at ch4:2078610..2080687- (Aspergillus niger KJC3)
GCGTAAACAAACCCACCCTTGCGCCAGTCACCTGACTGCCCCCGCTGCCT
TGCATTTCAGGCGCTGTACTGTGTTTTGTTAGTATTCCAAATCGTGATCA
ATCCAGGTTTATCGAGATATCCGGATATTGCCTCCTTCGTATGTAGTATG
GAATAAGGAAAAGACAAGGAGTATTGTTTCTGTTGTGTGACCAGCCAATG
AAAGACATTGTTTCCGTATCTTATCGCCATCCCCGTGACGAGCGCCAGAT
TGACGTTTTCCCCCTCAACTCACTTCTCTTACTGCCGGCTGCCCACCACC
ACAACTGGGAAGTCTCCTGCGAGCAGATGCGATCAAATGCAGAATCACCC
AGCAACACCACCGCACACTGGTTATCCCGTGCTTTGCACAATGTTCGCAG
GGATGCACCGCCCTTTACCTAGACTTTGGCTGGACAGCTCCGTTGATGAG
GTGATCGAGGCGGCTGCAAGGGTGATGTCATGCGGGCGGCCAGCTGGACT
TGCCTTCCCCTCGCTAATCCAGTGGAAGCTAACTTACTAGTATGCAGATC
GTCAACCACTTGCTTCCTTGACTACTTTATCTCCCCTGCTCTTGTGCTCA
CGGCCAACTCAATTATTCCGAGCGCTATCTGGCAGATCATCTGCTGCTGC
ACCTGTCACCCTTGGCTTCTCGGCTTTCAGTCCATCCAGGAGACTCGTGA
TGACTGCTGCGCTTGTGAATCAGCCGGCCTGGGAGGAACGGAAACAGGCA
CCCGCGGAGATGGACGACGATCCCCAGACGTCTTTATCGGAAACAACTTC
CAACAATGCCAGAGAAATCAGCGCTCCATTTTTAGAGCTTCCCCCTGAGC
TAGTCCAGCAAATATTGTCATATTTATCGGCTCAAGATCTCGCTCGCCTG
TCAACCACCTGCCGCACTTTCGCTGAGCATGCGACCAACGAGCTTTTGTG
GGCCAATATCATCAACTCCAATCTTCCTGAGCCCATACACACACCAGGTG
TCTTTGACTCCTTTCGCAGTCTCTACATCGCCCACCATCCTTGCTGGTTT
ATTCCTCGCAACAAAATCTGGTTTTCGGACACTGAGCACACGGGCAATTT
AATCCTCGCCCGCTATGATCACCGACGGGGCGTCATAGAGGCTTACCGAG
TCATTGCAGAACGTCGCTCGCACCAATTTCAACTTTGGGACTGGAACCCA
GATGTTATTATCCAAACGTTCAATCCTAAAGTCAGTCTGTGGCTAGATGA
TCCAGTCCTGCTCCTTAAAAACCACCACGAGGGACGGCCGTTATATTTAC
GCGGTGAGACCCGCATGCCTATGCCCCTCGAGACGCAGCATGTCTTCAAC
TCGTTTTCGCTTTGTTCCACCCGAATGACATCTGATGTTGTGGCGAACAA
ACAATGGCCTCCAATAACCATTCCAACCAAACACCGCGTCTATCGCGGTG
AAGTTGACCCGGAGTGGGAACACCACCCCCAACAGCTGGACAGAATTTCT
GAGCATGCGTTTCGAATTAGAAGATGGGCACATTTCCGATTGGGCATGCC
GATCTTCACCGCTGGCCGGAGCGAGACGCTGTCGACTTATGCTACACTTG
ACCCGGAGCTGTATACGCCCACGGACAAGAAACCATACCAAGGCATTTGG
GTTGGAGACTACTCAGCACATGGATGTGAATTTCTGCTTTTCCTACAACG
TGATCAAGGGGAAGGGCGATGCAGCCTTGAAGCTATCAAGCTCACTGGAG
ACCCTAACGTTCCTCGTGGCGAAATATCGTTCTCAGCAGACGACATTGGC
CCAGGAGGATTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCACG
CATAGTAAGGAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATGGTA
AGTTTGATCGGAAAAGTGGCCGGACATCTCGCTTTGCAAACTAACCTGGT
TCTTAGATACGTTTATCGCATCCCAACTCATTTTGATTTCGCCAGAGTGC
GTGGCGCACTATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTCT
GGACATCGATGCATTACTCCGGACATAG
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Coding sequence (CDS) from alignment at ch4:2078610..2080687-

>KJC3_005246-T1 ID=KJC3_005246-T1|Name=KJC3_005246-T1|organism=Aspergillus niger KJC3|type=CDS|length=2640bp|location=Sequence derived from alignment at ch4:2078610..2080687- (Aspergillus niger KJC3)
ATACGTTTATCGCATCCCAACTCATTTTGATTTCGCCAGAGTGCGTGGCG
CACTATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTCTGGACAT
CGATGCATTACTCCGGACATAGATGACTGCTGCGCTTGTGAATCAGCCGG
CCTGGGAGGAACGGAAACAGGCACCCGCGGAGATGGACGACGATCCCCAG
ACGTCTTTATCGGAAACAACTTCCAACAATGCCAGAGAAATCAGCGCTCC
ATTTTTAGAGCTTCCCCCTGAGCTAGTCCAGCAAATATTGTCATATTTAT
CGGCTCAAGATCTCGCTCGCCTGTCAACCACCTGCCGCACTTTCGCTGAG
CATGCGACCAACGAGCTTTTGTGGGCCAATATCATCAACTCCAATCTTCC
TGAGCCCATACACACACCAGGTGTCTTTGACTCCTTTCGCAGTCTCTACA
TCGCCCACCATCCTTGCTGGTTTATTCCTCGCAACAAAATCTGGTTTTCG
GACACTGAGCACACGGGCAATTTAATCCTCGCCCGCTATGATCACCGACG
GGGCGTCATAGAGGCTTACCGAGTCATTGCAGAACGTCGCTCGCACCAAT
TTCAACTTTGGGACTGGAACCCAGATGTTATTATCCAAACGTTCAATCCT
AAAGTCAGTCTGTGGCTAGATGATCCAGTCCTGCTCCTTAAAAACCACCA
CGAGGGACGGCCGTTATATTTACGCGGTGAGACCCGCATGCCTATGCCCC
TCGAGACGCAGCATGTCTTCAACTCGTTTTCGCTTTGTTCCACCCGAATG
ACATCTGATGTTGTGGCGAACAAACAATGGCCTCCAATAACCATTCCAAC
CAAACACCGCGTCTATCGCGGTGAAGTTGACCCGGAGTGGGAACACCACC
CCCAACAGCTGGACAGAATTTCTGAGCATGCGTTTCGAATTAGAAGATGG
GCACATTTCCGATTGGGCATGCCGATCTTCACCGCTGGCCGGAGCGAGAC
GCTGTCGACTTATGCTACACTTGACCCGGAGCTGTATACGCCCACGGACA
AGAAACCATACCAAGGCATTTGGGTTGGAGACTACTCAGCACATGGATGT
GAATTTCTGCTTTTCCTACAACGTGATCAAGGGGAAGGGCGATGCAGCCT
TGAAGCTATCAAGCTCACTGGAGACCCTAACGTTCCTCGTGGCGAAATAT
CGTTCTCAGCAGACGACATTGGCCCAGGAGGATTTGTTCGCATTGCGGAG
GAAGCTCTCTTTCAAGGAGCACGCATAGTAAGGAGCAAAGGCCATGTAGC
GGGCCTCGGTTTTAGAGATGATACGTTTATCGCATCCCAACTCATTTTGA
TTTCGCCAGAGTGCGTGGCGCACTATTGGGAAACTATGGGCCATATCTCC
TATTACCGTCGTCTGGACATCGATGCATTACTCCGGACATAGATGACTGC
TGCGCTTGTGAATCAGCCGGCCTGGGAGGAACGGAAACAGGCACCCGCGG
AGATGGACGACGATCCCCAGACGTCTTTATCGGAAACAACTTCCAACAAT
GCCAGAGAAATCAGCGCTCCATTTTTAGAGCTTCCCCCTGAGCTAGTCCA
GCAAATATTGTCATATTTATCGGCTCAAGATCTCGCTCGCCTGTCAACCA
CCTGCCGCACTTTCGCTGAGCATGCGACCAACGAGCTTTTGTGGGCCAAT
ATCATCAACTCCAATCTTCCTGAGCCCATACACACACCAGGTGTCTTTGA
CTCCTTTCGCAGTCTCTACATCGCCCACCATCCTTGCTGGTTTATTCCTC
GCAACAAAATCTGGTTTTCGGACACTGAGCACACGGGCAATTTAATCCTC
GCCCGCTATGATCACCGACGGGGCGTCATAGAGGCTTACCGAGTCATTGC
AGAACGTCGCTCGCACCAATTTCAACTTTGGGACTGGAACCCAGATGTTA
TTATCCAAACGTTCAATCCTAAAGTCAGTCTGTGGCTAGATGATCCAGTC
CTGCTCCTTAAAAACCACCACGAGGGACGGCCGTTATATTTACGCGGTGA
GACCCGCATGCCTATGCCCCTCGAGACGCAGCATGTCTTCAACTCGTTTT
CGCTTTGTTCCACCCGAATGACATCTGATGTTGTGGCGAACAAACAATGG
CCTCCAATAACCATTCCAACCAAACACCGCGTCTATCGCGGTGAAGTTGA
CCCGGAGTGGGAACACCACCCCCAACAGCTGGACAGAATTTCTGAGCATG
CGTTTCGAATTAGAAGATGGGCACATTTCCGATTGGGCATGCCGATCTTC
ACCGCTGGCCGGAGCGAGACGCTGTCGACTTATGCTACACTTGACCCGGA
GCTGTATACGCCCACGGACAAGAAACCATACCAAGGCATTTGGGTTGGAG
ACTACTCAGCACATGGATGTGAATTTCTGCTTTTCCTACAACGTGATCAA
GGGGAAGGGCGATGCAGCCTTGAAGCTATCAAGCTCACTGGAGACCCTAA
CGTTCCTCGTGGCGAAATATCGTTCTCAGCAGACGACATTGGCCCAGGAG
GATTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCACGCATAGTA
AGGAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005246KJC3_005246Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005246-T1KJC3_005246-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005246-T1.cdsKJC3_005246-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005246-T1.exon2KJC3_005246-T1.exon2Aspergillus niger KJC3exon
KJC3_005246-T1.exon1KJC3_005246-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005246-T1.utr5p1KJC3_005246-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR021894
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
DBxrefPFAM:PF12014
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2078610..2080687 -
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