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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2084053..2088020+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005248-T1 ID=KJC3_005248-T1|Name=KJC3_005248-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3968bp|location=Sequence derived from alignment at ch4:2084053..2088020+ (Aspergillus niger KJC3)
ATCAGTGCATCTAGTGGGAAAATGGCAGTGGTTGCAGCGGTCTGATGGCA
GCTTGGGGTTTCCATGGTTGAGTCGGACTCCCTGCGTTATAAGGTTCATC
CCGCGGGTGGGGGCGCTTTGATCTTTACTGAATTCTGGCACAGCTTCCCC
GTCTCCCTTGTTTGCGTCAGGCCCTGCGGAATCCTTTTCTCTATACAAAG
TACTATCGATTGATTGTTAATATTGTTAATATTTCTGACGACAGGGTGAC
AACCGTGCCATGGGGACTGCAGTCAGCGGGGGAACCACAGCTGGGACTAC
TGCCATGTGTCATGTCCGAGGGAAAAGGGAGAGAGCGAGGAGGTCAGTGC
ATCCATACCCACCGGGGTAATTAAAGGAAAGCACTAACAGGCTAACAGCA
TCCTTTTGATTATTCCATGAATGCTCTAGAAGGACTAGAATGGCACTAGA
GGGAAATTGGTCGCCGTTAGCATCCTCTCGAATCCATCCCTGATCCACCA
GGGGTTTCCCAGGGAATGCGTCATCCAGGAACCTGTCCACGAACACAGCA
CCACTAGCTACACAGTAATTGCACCAACCATTGCGGGCTGACGGGGATGG
AACTGGTTTTTGCCACCGGAAGGGGATGCAAGATCGGGGCCAGCATGTGA
ACTAAGGTTTGGGACAATCGGGGGATGCACGATCAAGGTTTCGCTAAAAA
TGTGTCGCAACTTGCAAGGAACTGCAAGCTGGCCTTTTAGGGGCGTGGGG
GAAGGGAGACGATCGGGGGAGTGCAGGAGATTGCAGGAAAGTCCCGGCCA
GTCGGGGCTCCATGGTGATCATGACCAACAGTCAACTGAACAGATGCTAT
GCTGTGTTGAGAGTGAGTAGAAAGAGAGGCACGGGGTTTCAGCTGGTAAG
AGGACTGTTTCATCCCACCTCAGCAGTAGGATCAGCAGTAGCCATCATCA
GTATTGACTGTGTATGAACATTTGCAAGGAGTTGGTGCCGATTATTCCGT
CGATCGCAAAAGAAAGGAAGAGAGTCATTCCCTGGGGGGAGGTCAATAGT
GCCGGAGACTATCAGGCCAGGGGGAGGGAAGCACATCCACCAAAAGAAAG
AGAGGGATTATTAGTTATTCTTGTTCATGATTATTGAATAATACGTAAGG
CCATCCAGGCAGAGACCGTCGAGGAACCGAATCTGAGACGGAGCGCCATC
AACTTGAAGCCGCGGATCCGACCCCTGAACCCGCTGCCTCAGGCGTCGGG
GCCTCGTTGCTGTCTCTCTCCACTTTCTCTCTTTAGTTGGAAGTGACTCT
CTCACTTCTTCTTCTTCTTCTCCTTCTCCCTCTTTTCTCTTGCTTTCCTC
TCTCTCTTCCTCTCACCTACTCATCTCCATCCCCCCTGCCATTCATTCAT
CCTGATCACAGCTCTCACTCAATTCCCTCTCTGTCCACCATGGTTGTGTC
CACCGCGGTTGCATTGTCTCACCTGCATTGACTTTGTTTCCCCCCCACTA
CCGAACCACTGTTTGCCTCCCGCGTGTTGTTAACAGATTGGGCCTACTGT
TTATCTCACGTCACCCCGTCCCTCCTCTTTCTGGGACGCGTTCATTCATC
TTGTGAATGCCCTCCGATTCCTTCGCATCATCCGTGCGAAGCGCTGAATC
CCCTCTTCGCATCTCTACCTCCGTCGATTCTCTGACCAACCCCTCGAGCT
CCGATTCTCCCCTCCCCAGTCCCATCCGCCACGATCAATACCCTCTGCTG
ACCTCCCGCTTCCGCCACTTGTCGCCCAAACGAGCCGCCATCATGAACGA
GACAGGCGGCCATCCTGGTGTGCGAAACCTTCTTGCTAGGTTCGAGAACA
ACCAGAGCAACACCACTTCCCCTCCCTCCCGCGGTCGATCTCCCGCTGGC
TCCGAACATTCCGCCTCTGCTAGACCCTTGTCCAAGGTGCGCGCCAGCTT
CATCGCTGTCGATGGGGCCACTCAGCCGAACCCTGTCGCAGGGCTTCGCA
GTGTGAGTGGTCGCAGCGATAGCCCTGCTGCGCCGTCCCGGGTCAGGAGC
TTCAATTCGGAGGATTTCGAGGGTGGCTTGAGAAGTCCGTTGTCTGTGTC
ACCAACCAGCAACGGCTTCCCTCAGAAGATCACCGAACAGCCAGTTGCGG
CCTCGGAGACGCCACAGAATGATGTGCCTGAGAAGAGCGAACCTGCCCCG
GTAGAGCCCGAAAAGCCCTCAGAAGAGGTCACTGGGGAGCCCCCTGCTCC
GGCTGCTGCTCCTGTCCCAGCTTCTCCTGTAAAGGCCAGCAATGTCTCCT
CCCCCAAGCCGACCCCGACCAAGACAGTCGCCAAGCGACCATCCACTATC
CAGGTGGGGAAGACGGCACCCAAGCCTGCTACCAAGTCGCCAGCGCAACC
CCGTACGCCCACATCTCCTGCCAAACCCGAGGACAAGACTTCTCGGACCA
CGCGGGCTACCCGGCCGACGGCCACGAAGGCTGCGGCCCTCGAAGCCCCC
AAAGTCGCACACAAGCCGAGCCGGACGTCCTTGAACACTGCGACGAAGCC
CGTCACCAAACCTGCACGGCCCTCTATGCCTGCTCGTGACTTGACGAAGC
CGACAGCCTCGACCGCATCTCGCACCGCCAAAGCTATCGCAGCCAATCCT
ACTCGCCCGGCTTCGACAACGGCTTCCACTTCGTCTACCGCCAAGAAGCC
CACGACGACGTCTACGCTGACCCGCAAGCCGTCCACACTGAAGAGCTCGA
CTACTGCAACCCAGAAGCGCGCAATCACTCCTACCGCTTCCACCGTGCGC
AAGCCGTCGTCTCGTCCCTCCCCTCCCAGCAACCCCGGGAACGAACGCCC
TCACTCTCGTGTCAGCAACACGAGCTCCAAACCAGTTGACGAGGGATTTC
TGGCTCGCATGATGCGCCCCACTGCTAGCTCTGCTAGTAAGACGCACGAC
AAGGTTGAGGTCAAGAGTCCCCCGCGGGCCACCAAGCCGGCCCGGGCGCC
TAGACGAGTTCCCTCCAAGTTGGATACCCGTACTTCCCGTCCGACCAAGG
TCGAGCAAGGCAAGCCGCTGGAGAAGCCTGCGCCTGAGGCGAAGGCTGAG
GAGCCCGCCCAGGTTGTTTCTGAGGCCCCTGCCGTTCTGGAGAAGCCTGC
TGAGATTGTCGAGAAAGCTCCCGCAAAGGAGCCTGTTCAGGAGCCTGTTC
AAGAGCCTGTTCAAACATCTGTTGAGTCTGAAGCTGAAGCCGCTGCTCCC
GTCGCAAAGGCTGCTCCCGAAGTAGATGCTCCCGCGGTTGCTGAAGTTGC
TGCTACTGACCTTCCCGCGGTTGCTGAGACTGAGCCCGTTGCTGAGGTCC
CCGTGCCGGCGGAGGAGCCGGCCATTGAAGTGCCCGAGACCAAGGAAGCT
ACCGAGCCCGAAGCTCCCGCTGAGCAATCTACTGAGGCCCCTACTGAGGC
CGTCGTCGAAGCTCCTGAGGCTGTCGAGGCCCAGTCGGGCGAGGTTGATG
TTGACATGGGCAAGCTCTCTCTCAATTGACTTTCTGCAGAGCCTTGACCA
GTTACAATAGATATTTTCTCTTCTCGTTTCTTTCTCGTGACATATCTTTT
TATACCCTTGATAATCGTGATGCGACCAGGTACATATGCTTGTCTCCACG
TGTTCTTGATACTGATTTTATTGTTGGGCTTTACCCTTCTTCTCTGCTTC
TTGGCTTCTCTGTCTTCCACTCTGGTCTCGGGTTACCTTTCGGGATCTTT
GGGTAGGAGAGCCCCTTGTTGACAGTCGAACAAGACCGACGACGTGCATG
TCGGAGCATTGCAGGTGGAGTTGATTCGGATGTGATCTTAGCGATGTGTA
CGGAGTACTGCATCTTGCATAGTACTGGGTCCTCTGGCATATTCTTATCC
TTGATTATTTTATGCTTTGGTGTAAATTATTGGTATTCAGTAAATGAATA
GTTTTGTTAATCTTTGCA back to topCoding sequence (CDS) from alignment at ch4:2084053..2088020+ >KJC3_005248-T1 ID=KJC3_005248-T1|Name=KJC3_005248-T1|organism=Aspergillus niger KJC3|type=CDS|length=1923bp|location=Sequence derived from alignment at ch4:2084053..2088020+ (Aspergillus niger KJC3)
ATGCCCTCCGATTCCTTCGCATCATCCGTGCGAAGCGCTGAATCCCCTCT
TCGCATCTCTACCTCCGTCGATTCTCTGACCAACCCCTCGAGCTCCGATT
CTCCCCTCCCCAGTCCCATCCGCCACGATCAATACCCTCTGCTGACCTCC
CGCTTCCGCCACTTGTCGCCCAAACGAGCCGCCATCATGAACGAGACAGG
CGGCCATCCTGGTGTGCGAAACCTTCTTGCTAGGTTCGAGAACAACCAGA
GCAACACCACTTCCCCTCCCTCCCGCGGTCGATCTCCCGCTGGCTCCGAA
CATTCCGCCTCTGCTAGACCCTTGTCCAAGGTGCGCGCCAGCTTCATCGC
TGTCGATGGGGCCACTCAGCCGAACCCTGTCGCAGGGCTTCGCAGTGTGA
GTGGTCGCAGCGATAGCCCTGCTGCGCCGTCCCGGGTCAGGAGCTTCAAT
TCGGAGGATTTCGAGGGTGGCTTGAGAAGTCCGTTGTCTGTGTCACCAAC
CAGCAACGGCTTCCCTCAGAAGATCACCGAACAGCCAGTTGCGGCCTCGG
AGACGCCACAGAATGATGTGCCTGAGAAGAGCGAACCTGCCCCGGTAGAG
CCCGAAAAGCCCTCAGAAGAGGTCACTGGGGAGCCCCCTGCTCCGGCTGC
TGCTCCTGTCCCAGCTTCTCCTGTAAAGGCCAGCAATGTCTCCTCCCCCA
AGCCGACCCCGACCAAGACAGTCGCCAAGCGACCATCCACTATCCAGGTG
GGGAAGACGGCACCCAAGCCTGCTACCAAGTCGCCAGCGCAACCCCGTAC
GCCCACATCTCCTGCCAAACCCGAGGACAAGACTTCTCGGACCACGCGGG
CTACCCGGCCGACGGCCACGAAGGCTGCGGCCCTCGAAGCCCCCAAAGTC
GCACACAAGCCGAGCCGGACGTCCTTGAACACTGCGACGAAGCCCGTCAC
CAAACCTGCACGGCCCTCTATGCCTGCTCGTGACTTGACGAAGCCGACAG
CCTCGACCGCATCTCGCACCGCCAAAGCTATCGCAGCCAATCCTACTCGC
CCGGCTTCGACAACGGCTTCCACTTCGTCTACCGCCAAGAAGCCCACGAC
GACGTCTACGCTGACCCGCAAGCCGTCCACACTGAAGAGCTCGACTACTG
CAACCCAGAAGCGCGCAATCACTCCTACCGCTTCCACCGTGCGCAAGCCG
TCGTCTCGTCCCTCCCCTCCCAGCAACCCCGGGAACGAACGCCCTCACTC
TCGTGTCAGCAACACGAGCTCCAAACCAGTTGACGAGGGATTTCTGGCTC
GCATGATGCGCCCCACTGCTAGCTCTGCTAGTAAGACGCACGACAAGGTT
GAGGTCAAGAGTCCCCCGCGGGCCACCAAGCCGGCCCGGGCGCCTAGACG
AGTTCCCTCCAAGTTGGATACCCGTACTTCCCGTCCGACCAAGGTCGAGC
AAGGCAAGCCGCTGGAGAAGCCTGCGCCTGAGGCGAAGGCTGAGGAGCCC
GCCCAGGTTGTTTCTGAGGCCCCTGCCGTTCTGGAGAAGCCTGCTGAGAT
TGTCGAGAAAGCTCCCGCAAAGGAGCCTGTTCAGGAGCCTGTTCAAGAGC
CTGTTCAAACATCTGTTGAGTCTGAAGCTGAAGCCGCTGCTCCCGTCGCA
AAGGCTGCTCCCGAAGTAGATGCTCCCGCGGTTGCTGAAGTTGCTGCTAC
TGACCTTCCCGCGGTTGCTGAGACTGAGCCCGTTGCTGAGGTCCCCGTGC
CGGCGGAGGAGCCGGCCATTGAAGTGCCCGAGACCAAGGAAGCTACCGAG
CCCGAAGCTCCCGCTGAGCAATCTACTGAGGCCCCTACTGAGGCCGTCGT
CGAAGCTCCTGAGGCTGTCGAGGCCCAGTCGGGCGAGGTTGATGTTGACA
TGGGCAAGCTCTCTCTCAATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005248-T1.utr3p1 | KJC3_005248-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2084053..2088020 + |
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