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KJC3_005259-T1, KJC3_005259-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005259-T1
Unique NameKJC3_005259-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2113093..2114429-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005259-T1 ID=KJC3_005259-T1|Name=KJC3_005259-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1337bp|location=Sequence derived from alignment at ch4:2113093..2114429- (Aspergillus niger KJC3)
CTTCAGTTCTCACCTTTCACCCCTTCGCCTCTGCTTTCTCCAGTTCTACT
TCCCTGCCCCTGAGCACGGCCACCTCTCCGCTCCTCCCCTCCTTCTTGCC
TGCTTGTTAGCACCCTTTTCGAGTCTTTCGAGCATCTCTTTTTCACTCTG
CCCACCATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAA
CGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATC
TGGAATGGTATGATCTGGCTCTATCCTCCCTCTTGTCTTGCCGATTTCTG
TCGTGTGCGTGGACGAGCTCTTGTGAGCCGCATGGGAGCTCGCCATGGAT
TGCGACAGCGTGATGGAACCCAACCAGCTAACGAACCCGGTTCGCTCCCG
CAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACA
TTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATC
AATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAA
TGCTAAGAAGTAATGCTGTCTTTTCCAGCTCCGCCATGCTGCAGCCCAAC
TAACACAACCGCCCTTTCTGCAGGATCTACGAGAACCAGCACCTCCTGGA
TGCGACCGAGATCTTCCGCAAGCTGAACGTCCACAAGAAGGTTAGACTGC
ACTGTCCCAATCCCGCTACCAGGGCGGACCGACCGCTGACGCAAACTGCA
GGAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACC
TCTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGACTTCGT
GGCAAGACGGAACACGCACTGCGCAACGGCCGCCCGGGCTGAAGTGTCAT
GTAGTGCGAATGTCTTGACTTCTCCTTTGGCTAGAGAAGATTGGACGGAG
CATGGTTCTGCGAGTATCTGTCTCGCTGCTGTATCCCGACGCAACTTGCG
CCTCTCGTCCCGGCTGCTTGACACTGCCGTCGGTGTGCCGGCGCGTGCAG
CAGAAGAGACCTTGTATATGACGTGACTATGAAAGCATATCATTGATGAC
AGCGAATGCGTGGGGTCTCAAGATCTTGATGTTTTTTTAGGTTTGCGGAA
GAGAGATAGGCGATAGATGAGGTAATCCGGTCGCCTGGGAGCAGCACGCC
GGTGAGGCTGCTTGAGTTGTTTTTGTTTGCTTAGTGTACTTTCCTTGGGT
TTCTGATGTTGCTATTTTCCTGTTAATGTCTTCAATAATGGTGCTGTATA
TACCTCAGCGGTGTGACAATGAAACGCGTACGATGTC
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Coding sequence (CDS) from alignment at ch4:2113093..2114429-

>KJC3_005259-T1 ID=KJC3_005259-T1|Name=KJC3_005259-T1|organism=Aspergillus niger KJC3|type=CDS|length=1656bp|location=Sequence derived from alignment at ch4:2113093..2114429- (Aspergillus niger KJC3)
GATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGC
TGAACGTCCACAAGAAGGTTAGACTGCACTGTCCCAATCCCGCTACCAGG
GCGGACCGACCGCTGACGCAAACTGCAGGAATCTTTCATCAAGCTGGGCT
TCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTCGCCTTG
ATCCGCGACGAGTCTCACTGACTTCGTGGCAAGACGGAACACGCACTGCG
CAACGGCCGCCCGGGCTGAAGTGTCATGTAGTGCGAATGTCTTGATGACT
ACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTCCC
GAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGCTA
CTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAAGA
AATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCG
TCAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAA
TGGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAA
GCTGAACGTCCACAAGAAGGTTAGACTGCACTGTCCCAATCCCGCTACCA
GGGCGGACCGACCGCTGACGCAAACTGCAGGAATCTTTCATCAAGCTGGG
CTTCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTCGCCT
TGATCCGCGACGAGTCTCACTGACTTCGTGGCAAGACGGAACACGCACTG
CGCAACGGCCGCCCGGGCTGAAGTGTCATGTAGTGCGAATGTCTTGATGA
CTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTC
CCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGC
TACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAA
GAAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGC
CGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGG
AATGGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGC
AAGCTGAACGTCCACAAGAAGGTTAGACTGCACTGTCCCAATCCCGCTAC
CAGGGCGGACCGACCGCTGACGCAAACTGCAGGAATCTTTCATCAAGCTG
GGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTCGC
CTTGATCCGCGACGAGTCTCACTGACTTCGTGGCAAGACGGAACACGCAC
TGCGCAACGGCCGCCCGGGCTGAAGTGTCATGTAGTGCGAATGTCTTGAT
GACTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGT
TCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATG
GCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCT
AAGAAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAAC
GCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCT
GGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005259KJC3_005259Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005259-T1KJC3_005259-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005259-T1.cdsKJC3_005259-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005259-T1.utr3p1KJC3_005259-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005259-T1.exon3KJC3_005259-T1.exon3Aspergillus niger KJC3exon
KJC3_005259-T1.exon2KJC3_005259-T1.exon2Aspergillus niger KJC3exon
KJC3_005259-T1.exon1KJC3_005259-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005259-T1.utr5p1KJC3_005259-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR033466
DBxrefInterPro:IPR003377
DBxrefPFAM:PF03311
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2113093..2114429 -
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