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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2163527..2165739+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005279-T1 ID=KJC3_005279-T1|Name=KJC3_005279-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2213bp|location=Sequence derived from alignment at ch4:2163527..2165739+ (Aspergillus niger KJC3)
CCGAAATTTGCAACCATCCCACTTTTCCACCCCTCAAGTGAGGTCCAAAC
TTCACTACTACACCACAAATCTACACATTCAATCCATTATACTTCCCCCC
ACCATGGGCGCCGATATGGAGGCCGCCCCGGTCCTCTCCACCCCGGACGA
CCGCATCCTCGAAGCCACCGACCCCGTCCCGAACCGCAGTCCCGTCTCCG
ACGAAGAAATCGCCATCACCTATGACATTGAACGCACGCTCAAGGAGATC
CGCCAGGCGCGGTATAAGCGCATTGCGCTGCAGTTTCCGGATGATATGCT
CCCGGATGCGCCGAGGGTGTTCCAGCTTCTTAGTCGGGGATTGGATACTA
CGCGAGAGGGTGCCCGTGGCCAGAGTGCGGGGACGGAAGAAGGTGCAGGA
GAAGGGGAGAAGAAGGATCTGGCAGAGTCGGTGGCTCAGTTGAAGGTGGA
CGAGGCTGAGCCCGCGCCCAGGTTGTATATCCTGGCAGATACTTCCTACG
GAACTTGTTGCGTGGATGAGGTGGCGGCTGAGCATGTGGATGCCGATGTG
GTCGTGCATTACGGCCGGTCGTGTTTGTCGCCGACGGCCAGACTCCCTGT
GATTTATGTGTTTACGCATAAGGAGTTGGCGCTGGAGAAGGTCGTGCGTG
CGTTCAAGGAGACGTATCCGGAGCTGGATACGAAGGTTATTCTGGCGGCT
GATGTGACTTACTGTGATCATGTCCCCGCAGTGTATGAGGCTCTGGTGAA
GGAGGGGTATACGAATCTGTTTGCGACGGAGGTGCTTCATGACCCTTCGT
CTGCTATTCCGAACCGGACGGTGCCGGAGACGGTGCGCGAGAGTCCCGAG
TCTCTGGCTGAGTGGCAGCTTTTTCACATCTCTGATCCGCCTACTGCGCT
GCTTCTCACCCTTGCTTCTCGCGTGGCGGCTATCTACATCTATCCTACGG
ATAAGCCGGGCCAGGATGTTAAGCCCCTGCCCGCGTCCACGGCCGCCGCC
TTGCGCCGTCGCTATGCTATCCTGACGTCCTTGAATACCGCCCCGATCTT
TGGTATCCTGGTCAACACGTTGAGTGTGAAGAATTACCTGCATATTGTGG
ATCATGTTCGGGAACGGATCGCGGCGGCCGGGAAGAAGAGTTATTTGTTT
GTGGTGGGCAAGCTGAACGCGGCTAAGGTGGCTAACTTCAGCGAGATCGG
CGGCTGGGTGGTCATCGGATGCTGGGAAAGCTCCCTCGTTGATAGTCGGG
ATTTCTGGAAACCGGTTATCACGCCGTTTGAGTTGGAGCTTACCCTGAAG
GGAGATACGGAGCGGGTCTGGACGGGAGCCTGGCAGAGTGATTTCCAGAC
TGTCCTGGACCAGTCCGCTGCTGAGGCAGAGAATGGAGATGCGTCGACGA
ACGGTGCTGTGCCCGGGGAGGATGAGGATGAGATGTCCGAGCCCGAGTCG
GCTCCGCCAGAATTCGACTTGCGCACTGGCCGGTATGTCTCGCATTCTCG
GCCCATGCGAAACCCTGCACCCCGCGTTTCTGCCTCAGGAGAAGAGGGTG
CTGCCTCGTCAGCATCAGCTGGAGGTCCATCGGCAGCGCGAGCCCTGGCC
AGACGAGCCAAAGGGGATCTCGCGATGATCGGCGGGACCATCTCCCCTGG
AGCGGAATTCCTTCGGTCGCAACGGACGTGGAAGGGGCTGGGCAGTGATT
TCGATATCCAGTACGAGGAAGAGGAGGACGCGAAGGATAGCACACTGGTG
GTGGAAGGGCGCAAGGGTATTGCAAGGGGATATACGGTAGGAGAAACAAT
AGAGCGACACTAGTTCAGGCCGCCCTCGCTCCCATGGCGTTCGGAGAATC
GGATTGTTGGGCGCGACCGTTGAACAGGGTGGAAGTATGGGAACGAGTAG
GGGGTGGACAAGGCAAAGCCTAGTCAGGTGGAACTAGTGGTTTGCTATTT
TCTATGCAATGATGGATCGTTTTTGTGCCCTACTGATGCTGGTACGGCCC
AAAGCGGATGCCGAGTTTAGTGGTTGTGGTTGTGGTGGTGGTTTGGATCG
TCGGGGGGAACAACACCACGCAGCTAGCAGCAGATAGTGGAAAGAAACCA
AGAGGGATGAATTCAATATTCAATAAACACACCGGGGCGAATCACTAGTG
AAAGTTGAGACCCGTCAGGCCACACACTCCGGTGACCCAACGTATATCGT
CATAGGATTAAGT back to topCoding sequence (CDS) from alignment at ch4:2163527..2165739+ >KJC3_005279-T1 ID=KJC3_005279-T1|Name=KJC3_005279-T1|organism=Aspergillus niger KJC3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch4:2163527..2165739+ (Aspergillus niger KJC3)
ATGGGCGCCGATATGGAGGCCGCCCCGGTCCTCTCCACCCCGGACGACCG
CATCCTCGAAGCCACCGACCCCGTCCCGAACCGCAGTCCCGTCTCCGACG
AAGAAATCGCCATCACCTATGACATTGAACGCACGCTCAAGGAGATCCGC
CAGGCGCGGTATAAGCGCATTGCGCTGCAGTTTCCGGATGATATGCTCCC
GGATGCGCCGAGGGTGTTCCAGCTTCTTAGTCGGGGATTGGATACTACGC
GAGAGGGTGCCCGTGGCCAGAGTGCGGGGACGGAAGAAGGTGCAGGAGAA
GGGGAGAAGAAGGATCTGGCAGAGTCGGTGGCTCAGTTGAAGGTGGACGA
GGCTGAGCCCGCGCCCAGGTTGTATATCCTGGCAGATACTTCCTACGGAA
CTTGTTGCGTGGATGAGGTGGCGGCTGAGCATGTGGATGCCGATGTGGTC
GTGCATTACGGCCGGTCGTGTTTGTCGCCGACGGCCAGACTCCCTGTGAT
TTATGTGTTTACGCATAAGGAGTTGGCGCTGGAGAAGGTCGTGCGTGCGT
TCAAGGAGACGTATCCGGAGCTGGATACGAAGGTTATTCTGGCGGCTGAT
GTGACTTACTGTGATCATGTCCCCGCAGTGTATGAGGCTCTGGTGAAGGA
GGGGTATACGAATCTGTTTGCGACGGAGGTGCTTCATGACCCTTCGTCTG
CTATTCCGAACCGGACGGTGCCGGAGACGGTGCGCGAGAGTCCCGAGTCT
CTGGCTGAGTGGCAGCTTTTTCACATCTCTGATCCGCCTACTGCGCTGCT
TCTCACCCTTGCTTCTCGCGTGGCGGCTATCTACATCTATCCTACGGATA
AGCCGGGCCAGGATGTTAAGCCCCTGCCCGCGTCCACGGCCGCCGCCTTG
CGCCGTCGCTATGCTATCCTGACGTCCTTGAATACCGCCCCGATCTTTGG
TATCCTGGTCAACACGTTGAGTGTGAAGAATTACCTGCATATTGTGGATC
ATGTTCGGGAACGGATCGCGGCGGCCGGGAAGAAGAGTTATTTGTTTGTG
GTGGGCAAGCTGAACGCGGCTAAGGTGGCTAACTTCAGCGAGATCGGCGG
CTGGGTGGTCATCGGATGCTGGGAAAGCTCCCTCGTTGATAGTCGGGATT
TCTGGAAACCGGTTATCACGCCGTTTGAGTTGGAGCTTACCCTGAAGGGA
GATACGGAGCGGGTCTGGACGGGAGCCTGGCAGAGTGATTTCCAGACTGT
CCTGGACCAGTCCGCTGCTGAGGCAGAGAATGGAGATGCGTCGACGAACG
GTGCTGTGCCCGGGGAGGATGAGGATGAGATGTCCGAGCCCGAGTCGGCT
CCGCCAGAATTCGACTTGCGCACTGGCCGGTATGTCTCGCATTCTCGGCC
CATGCGAAACCCTGCACCCCGCGTTTCTGCCTCAGGAGAAGAGGGTGCTG
CCTCGTCAGCATCAGCTGGAGGTCCATCGGCAGCGCGAGCCCTGGCCAGA
CGAGCCAAAGGGGATCTCGCGATGATCGGCGGGACCATCTCCCCTGGAGC
GGAATTCCTTCGGTCGCAACGGACGTGGAAGGGGCTGGGCAGTGATTTCG
ATATCCAGTACGAGGAAGAGGAGGACGCGAAGGATAGCACACTGGTGGTG
GAAGGGCGCAAGGGTATTGCAAGGGGATATACGGTAGGAGAAACAATAGA
GCGACACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0017183 | peptidyl-diphthamide biosynthetic process from peptidyl-histidine |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005279-T1.utr5p1 | KJC3_005279-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005279-T1.utr3p1 | KJC3_005279-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262SI7 |
| DBxref | InterPro:IPR042265 |
| DBxref | InterPro:IPR042264 |
| DBxref | InterPro:IPR042263 |
| DBxref | InterPro:IPR016435 |
| DBxref | InterPro:IPR010014 |
| DBxref | PFAM:PF01866 |
| Product | Diphthamide biosynthesis protein 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2163527..2165739 + |
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