|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2165763..2169000+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005280-T1 ID=KJC3_005280-T1|Name=KJC3_005280-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3238bp|location=Sequence derived from alignment at ch4:2165763..2169000+ (Aspergillus niger KJC3)
AGCAGCAAGCAACAACACAAAAGAGTGGCATCCCAACGGGGCCAAGGCGA
CCTATCACATGATTGCCGGCCTCCCGCTGGATTTTTGTTGCCCATCGCCA
ATTCTGAGCTGAGTTGTCCAAGCCACCCCCAATCGGTTTGCTGTAACTTG
TTTCTCCCTCCTCTTCCCTCCGACTCTCCCTCCATTCTACTCCTCTCCCT
CCCGTGGATGGCCACAGCTCATGTCCAACATTTGGGTGTAATCCGCCCTC
CTTGCGCATGCTCTCCTTCCTGGTTCCCTTATGATGTGCGGCCCTCTCCC
GCATTCTCCGCTGTGCTCGCGATCTCGCGTCACTCTAACCTCCAGCTTCC
TTCCAGGGGAGTAAAATCAAAAGGGGAAAGAAAAAGGCTGTTGAAGAAGC
AAAGGGTTCCGCCATCCGGTTCGGATCGTCATGCCATCCGTATCTCATAC
TCCGGGAGTGCCCGCTATCGATCATCGATCGGGCCCTGAGTCGACTACTA
CTACTACTACTATTACTGCAGCCATGGCTGGCAAGCCCAGCGGAGACCAA
CAACAGCAAGACCTGGTGGACTCCGCGCTCGAACACTCCGTCCTTCCGGC
CCAACATCCGCTATCCACCTTCGAACTCGTTGTCACTACCAATGCCCCCA
TCCTCGAATCTCTCCTCTTGCAGACTCCCACCGAGGCCATCCTGAGCCTC
TACCATACCTCCCGCTACCTCCGATCATTCCTCCGCTCTTATCCGACAGC
ATGGAAATACCTCTCTTTTCGGCTGCTCTACCCATCTGGCACCCCGCCGC
CCCTCCGGGTTGTCTTCACCGGCTCCTCCGAGACCGTCATCCCGCGCCAG
TCCCGCCCGTATGCACTCGACCAGCTGTTGATGAACGTGGTGATTCCGTT
TAGTCCGTGCTTGCGCAGTCTAGAGCTGGATAACACAGCTGTGTCGGGGC
AGATTCTGATGTCGACGGTATTACATTCGCGACGCGAGACCTTGGAACAT
CTCTCCGTACGAGGCTGCAAGAACGTGTCGCTCAAGTACCACATCATCCC
GTATCTCACGATGTTTGGCCTCCAGTATGATGTCAATATGGAGCAGAACA
TCGGAAGTTCGCCGGATACGAAGCATCTTGCACTGAAGAGTCTCTACACG
TATCGATGTCGACATCATCGACGACGGCCGTATCTGACTTCCTCCTTGTC
GCGAAAAGACTCCGACTCCGAACCCACACATGAACTGGTCAATCTCTGCC
ATAAGCTGGGCATCTGGACGGATACCGCATGGTGCTCGACTCCTGCGGGG
AGATGTTTCCGGAGGCGGGGCTACGTGTCTATGCGTGTTCCCCAGGGGTC
GGCGGAGGTGTGGGTGGTGTTTGATCGGCTGTGGAGGTCGAAGAATTGGA
TTGGTCCGGTAGACCAGGCGAACCGTCCAGCCCAGCGGGATGCGAAGCTG
TGGGAACACAGTGAGACCGGCTATTACGGCGAGGCTTTGGGGACTGGAGA
GGGTGGAGACCATGGAGAGGGGAAGATGCTACCGGCACATTTGCGACGGA
GCCATACACAGTTCGTGGAGAATATCCGCTGCGACAACTGCTGCGAGTTG
ATTCCTGAACGATGCGAGCAATGCAGTATATTGATGCACTGTGTTGGATG
TCGAAAGACTCTATGTGCTAGCTGTGCTTATGAACGGCCTTATCTGCACT
GCCGGCCTCGATCGGCTTCCAAGGACAGTCCATACTGGTGGGCTCCTGGA
GCTACCATGTCGCCATGTTCTATGCAAGACCCTGTCGAAGATTCCGAAAA
CACTACTGGAGCCAACAACGCAACTCCCTCCTATCCCGCTCTTACGTTCC
ATTGGTGCTGCACTGAGCCAATCTTTTCTGGCGGCGGCGGCATCAGTATT
GGCACACCGAACCGCGATGTGGACCAGGTACGAGCCGTGCCTCTGCCTCG
AGGACAAGGATGGGAGGACTTGGAGTACTCGGCACAGGAATGGAGCAAAA
CGTTCCCGCGGGACGCCTACGGAGACCCTCGCAAGCCCGACTACACGCTG
GAAACCGGACATATCGCCATGATGCGGTGGCTACTTGGCCCACCCGACCG
ACAGCCTGCAGCTTGCCCGCGCAATCTATGTCAGGACTGCTACGACACAC
CTCAGTGGAAGGTCCACTGCAAGAGCTGCTCGAAGCCGCTGTGTATCGAG
CATGATCTACGGGGACTCCGCTTGAGAATTTGTGGGTACCGGGATCTGAC
GCTGGAAAAGCTGGCGATCCAGAACCACGCCGAGACCGGCTCTCGCGGGT
TTGCATCGCGGGTGCACTACACGAATTCCGTGCCAGAGTTCGAGCTGCCG
TATCGGACGCAGCGGATCCTTGATTCAACTACGAGCAGTTTTACCGAGGA
CAACCAAGAGGTCTTTCCCGAGGCGAGCAGTAGCGCGTTCGATCATCCTC
GACCCACGCCTTTGGTTCACCGCCGCTCGCGAAGCCTCTCCATCTCCAAT
TCCAACCGTTCACGTTCATCCTCGCCATCCTCGGTCTACTGCGACTCGCC
GTCCGACCAGCCCAGATGGCAAGGATGTCAGTCCTTTTTCTGTCCGCAGT
ACCGAGCGGTCGGTGACCAGCGACAGCGGTGCGCCAGCGTTCTCCGCGAG
TGCACCAGTTGCTCGGTGTACGTATGCGAGGACTGCACCATCGCCTTCCC
GCCGTGCAACTGCTCCTATTGCGAAGTCAACTACCTGTGCCCGAACTGCC
TGAAGATGCGGGAGCGAGACGGGACCTGCCGCCGGCCGGCAGAAGAAAAG
GCCCGTCGGGAACGCAAATGGAAAGAGGACATGCGCCTGCTGGAGGGGAT
TGTGCAGGACAAGCTGGCGAACAAAATGGCAAACAAGATGGCCGAGTATG
CCGGCGAGTTCTTCGACGTCATCGAGCGGGAGGAATCCGGCGAGGTGCAG
CATATCGAAGAAGCCTCGACGTATCCTGGACCGGTGGCAGAGGATCTAGG
CGAGGAGATATTAACGGACAGTACGGAATGAGATAAAATATGGCTGGCAG
GGATCTACGGGCGTCGAGGATGGGTGGACTGATGATTATTTTCGGAGTTA
TTCTACATCTGGGCCTGCAGATATTAAGCAGCGTGCATAGCAAATGTTAC
TGTTCGGGTTGCCCTGATGCGCCGGGCGCTGGGGGTTATCCTGTTGTCCC
GGGAGGACAGAAGAGAACCTGTGGGTCATTGATGGAGG back to topCoding sequence (CDS) from alignment at ch4:2165763..2169000+ >KJC3_005280-T1 ID=KJC3_005280-T1|Name=KJC3_005280-T1|organism=Aspergillus niger KJC3|type=CDS|length=2601bp|location=Sequence derived from alignment at ch4:2165763..2169000+ (Aspergillus niger KJC3)
ATGCCATCCGTATCTCATACTCCGGGAGTGCCCGCTATCGATCATCGATC
GGGCCCTGAGTCGACTACTACTACTACTACTATTACTGCAGCCATGGCTG
GCAAGCCCAGCGGAGACCAACAACAGCAAGACCTGGTGGACTCCGCGCTC
GAACACTCCGTCCTTCCGGCCCAACATCCGCTATCCACCTTCGAACTCGT
TGTCACTACCAATGCCCCCATCCTCGAATCTCTCCTCTTGCAGACTCCCA
CCGAGGCCATCCTGAGCCTCTACCATACCTCCCGCTACCTCCGATCATTC
CTCCGCTCTTATCCGACAGCATGGAAATACCTCTCTTTTCGGCTGCTCTA
CCCATCTGGCACCCCGCCGCCCCTCCGGGTTGTCTTCACCGGCTCCTCCG
AGACCGTCATCCCGCGCCAGTCCCGCCCGTATGCACTCGACCAGCTGTTG
ATGAACGTGGTGATTCCGTTTAGTCCGTGCTTGCGCAGTCTAGAGCTGGA
TAACACAGCTGTGTCGGGGCAGATTCTGATGTCGACGGTATTACATTCGC
GACGCGAGACCTTGGAACATCTCTCCGTACGAGGCTGCAAGAACGTGTCG
CTCAAGTACCACATCATCCCGTATCTCACGATGTTTGGCCTCCAGTATGA
TGTCAATATGGAGCAGAACATCGGAAGTTCGCCGGATACGAAGCATCTTG
CACTGAAGAGTCTCTACACGTATCGATGTCGACATCATCGACGACGGCCG
TATCTGACTTCCTCCTTGTCGCGAAAAGACTCCGACTCCGAACCCACACA
TGAACTGGTCAATCTCTGCCATAAGCTGGGCATCTGGACGGATACCGCAT
GGTGCTCGACTCCTGCGGGGAGATGTTTCCGGAGGCGGGGCTACGTGTCT
ATGCGTGTTCCCCAGGGGTCGGCGGAGGTGTGGGTGGTGTTTGATCGGCT
GTGGAGGTCGAAGAATTGGATTGGTCCGGTAGACCAGGCGAACCGTCCAG
CCCAGCGGGATGCGAAGCTGTGGGAACACAGTGAGACCGGCTATTACGGC
GAGGCTTTGGGGACTGGAGAGGGTGGAGACCATGGAGAGGGGAAGATGCT
ACCGGCACATTTGCGACGGAGCCATACACAGTTCGTGGAGAATATCCGCT
GCGACAACTGCTGCGAGTTGATTCCTGAACGATGCGAGCAATGCAGTATA
TTGATGCACTGTGTTGGATGTCGAAAGACTCTATGTGCTAGCTGTGCTTA
TGAACGGCCTTATCTGCACTGCCGGCCTCGATCGGCTTCCAAGGACAGTC
CATACTGGTGGGCTCCTGGAGCTACCATGTCGCCATGTTCTATGCAAGAC
CCTGTCGAAGATTCCGAAAACACTACTGGAGCCAACAACGCAACTCCCTC
CTATCCCGCTCTTACGTTCCATTGGTGCTGCACTGAGCCAATCTTTTCTG
GCGGCGGCGGCATCAGTATTGGCACACCGAACCGCGATGTGGACCAGGTA
CGAGCCGTGCCTCTGCCTCGAGGACAAGGATGGGAGGACTTGGAGTACTC
GGCACAGGAATGGAGCAAAACGTTCCCGCGGGACGCCTACGGAGACCCTC
GCAAGCCCGACTACACGCTGGAAACCGGACATATCGCCATGATGCGGTGG
CTACTTGGCCCACCCGACCGACAGCCTGCAGCTTGCCCGCGCAATCTATG
TCAGGACTGCTACGACACACCTCAGTGGAAGGTCCACTGCAAGAGCTGCT
CGAAGCCGCTGTGTATCGAGCATGATCTACGGGGACTCCGCTTGAGAATT
TGTGGGTACCGGGATCTGACGCTGGAAAAGCTGGCGATCCAGAACCACGC
CGAGACCGGCTCTCGCGGGTTTGCATCGCGGGTGCACTACACGAATTCCG
TGCCAGAGTTCGAGCTGCCGTATCGGACGCAGCGGATCCTTGATTCAACT
ACGAGCAGTTTTACCGAGGACAACCAAGAGGTCTTTCCCGAGGCGAGCAG
TAGCGCGTTCGATCATCCTCGACCCACGCCTTTGGTTCACCGCCGCTCGC
GAAGCCTCTCCATCTCCAATTCCAACCGTTCACGTTCATCCTCGCCATCC
TCGGTCTACTGCGACTCGCCGTCCGACCAGCCCAGATGGCAAGGATGTCA
GTCCTTTTTCTGTCCGCAGTACCGAGCGGTCGGTGACCAGCGACAGCGGT
GCGCCAGCGTTCTCCGCGAGTGCACCAGTTGCTCGGTGTACGTATGCGAG
GACTGCACCATCGCCTTCCCGCCGTGCAACTGCTCCTATTGCGAAGTCAA
CTACCTGTGCCCGAACTGCCTGAAGATGCGGGAGCGAGACGGGACCTGCC
GCCGGCCGGCAGAAGAAAAGGCCCGTCGGGAACGCAAATGGAAAGAGGAC
ATGCGCCTGCTGGAGGGGATTGTGCAGGACAAGCTGGCGAACAAAATGGC
AAACAAGATGGCCGAGTATGCCGGCGAGTTCTTCGACGTCATCGAGCGGG
AGGAATCCGGCGAGGTGCAGCATATCGAAGAAGCCTCGACGTATCCTGGA
CCGGTGGCAGAGGATCTAGGCGAGGAGATATTAACGGACAGTACGGAATG
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005280-T1.utr5p1 | KJC3_005280-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005280-T1.utr3p1 | KJC3_005280-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2165763..2169000 + |
|
