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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2171759..2172991+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005283-T1 ID=KJC3_005283-T1|Name=KJC3_005283-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1233bp|location=Sequence derived from alignment at ch4:2171759..2172991+ (Aspergillus niger KJC3)
ATCACCTTTCAACCAGGGACACGTAGTCTCTGCATCGCATTGACGTGCTC
CGGTGTCTCAATCAACCTTCTTCCACTTTGCCCCTCCACCACCACCACCG
CCATCGACTCCCGTCTCACAACGGGTGGACTCCGAATCAGGAACATCTAC
AGCAGACTCACCACCTCACTCCAACAACTACACACGAACATCTCCTCCAC
AACTGTACCAAGACCAAGAACGAACAGCAACAATGCTCTCAACCCTCCTC
GCATCCCTCTGTCCATGCTCCTGCACCAGTCCCAGCCCTCCCCCACCACC
AGCTCCGACAACCACATCCACCCAATATCACCAGCACAATGACCTATCCC
AATACCAACCTCCCCTCGAACCCTCCCTCCCAGCCTACACCCCTCACCCA
AACGTCCAAGACCTAAACGAAAAGACCCTCGCCCTGCACCTCCGCGACCC
GCCCATCTCTTCATCCTCCTACAATACCACCGACAGCAACAATTCCTTCC
CCCTCGACGAAAAACACCCCTACACTACTACCACCACCACCACCCCACAA
GCATCAGAGAATAATGCGGCTGCAACAACAGCAGATGACGCATCCTCTCA
AATCTCCTTCCCTAGCACAACCCACAGCTACGGGAACACCTCCACCGCGA
CGAGAGAGACGCCTCCTCCGCCGTATTCGCCGACGTGGAGGGGCCATGCA
GAGGGGGAGGTCGAGGGGGTGATTTCGCCGGTGCCGTCGTTGAGTTTTTC
GGGCGATGGGGAGAGGTCCAGGTCTGTGTCGATGTCGGGGAGGAGTAGTG
GGAGTTGGGGAGATGGTGTTGACGGGGAGGGGGATGGGGAGAATGTGAGA
ATTGCGGTGCCGAGGGGAGTGTATGTTGCTGGGGTTGGGAGGAGGTGGGG
AGATGAAGGGAGTGTTGGGGAAGAGTATTATGGGTATGGTGATATGAGGA
GGGTGAGTCATGAGAGTGAGAGGAGTGGTGGTGGGAGGAGGGGGTCGTGG
GGTGTGTAGAGATTCATAGCTGTTTGTTATGGCTTTTGGTGCGTTGGTTT
GGTTTGTTTGCTTGGGGTTTGGAGTTTTTCTGGGTGTAAATATGGGTCCT
ATCGATGGAAGTGCCTTATAAGGCTTAATGTGGATATTTCTATTAGGCTA
TGTGTGGATGAGATACGAGTAAATGATATATAATATACTCAATTATCTCT
GATAGGTATATGCAATATCAAAGTTTACTTGGT back to topCoding sequence (CDS) from alignment at ch4:2171759..2172991+ >KJC3_005283-T1 ID=KJC3_005283-T1|Name=KJC3_005283-T1|organism=Aspergillus niger KJC3|type=CDS|length=777bp|location=Sequence derived from alignment at ch4:2171759..2172991+ (Aspergillus niger KJC3)
ATGCTCTCAACCCTCCTCGCATCCCTCTGTCCATGCTCCTGCACCAGTCC
CAGCCCTCCCCCACCACCAGCTCCGACAACCACATCCACCCAATATCACC
AGCACAATGACCTATCCCAATACCAACCTCCCCTCGAACCCTCCCTCCCA
GCCTACACCCCTCACCCAAACGTCCAAGACCTAAACGAAAAGACCCTCGC
CCTGCACCTCCGCGACCCGCCCATCTCTTCATCCTCCTACAATACCACCG
ACAGCAACAATTCCTTCCCCCTCGACGAAAAACACCCCTACACTACTACC
ACCACCACCACCCCACAAGCATCAGAGAATAATGCGGCTGCAACAACAGC
AGATGACGCATCCTCTCAAATCTCCTTCCCTAGCACAACCCACAGCTACG
GGAACACCTCCACCGCGACGAGAGAGACGCCTCCTCCGCCGTATTCGCCG
ACGTGGAGGGGCCATGCAGAGGGGGAGGTCGAGGGGGTGATTTCGCCGGT
GCCGTCGTTGAGTTTTTCGGGCGATGGGGAGAGGTCCAGGTCTGTGTCGA
TGTCGGGGAGGAGTAGTGGGAGTTGGGGAGATGGTGTTGACGGGGAGGGG
GATGGGGAGAATGTGAGAATTGCGGTGCCGAGGGGAGTGTATGTTGCTGG
GGTTGGGAGGAGGTGGGGAGATGAAGGGAGTGTTGGGGAAGAGTATTATG
GGTATGGTGATATGAGGAGGGTGAGTCATGAGAGTGAGAGGAGTGGTGGT
GGGAGGAGGGGGTCGTGGGGTGTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005283-T1.utr5p1 | KJC3_005283-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005283-T1.utr3p1 | KJC3_005283-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2171759..2172991 + |
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