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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2237287..2239996- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005296-T1 ID=KJC3_005296-T1|Name=KJC3_005296-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2710bp|location=Sequence derived from alignment at ch4:2237287..2239996- (Aspergillus niger KJC3)
TTCACTTCGTTTTACTCAACATTCATCCATTCATCCTTCCCCCCCCGAAA
CTCAACCAACTAGTGCTCTCCTTTTTCAAATAATCCCCACTCTCTCCGTT
CATGGCGATCGTCCAATTCAGGGCATGGAAGATAACGACGATGATTTCTT
CTCCGACGATGGCTTCGACGACATCCCTCCCGGTACCTTGTTCCAATTGG
AGCAGAAGGCTTATCGCGCAACTCAGGCCCCAAACCCTGCCCAACAACAT
CACCAGCCACAACAACACCAAGAGTCTGTCTCTGACGTAAAGAGATCGTC
GCGACCTTTTTCCGATCAGAACCATGGGGCTTTTTCCGAGAATGCATTCA
CCTCCAACGCTTCCCTACAACCGCCTCCTGCTTTGCATACCGGGTTGAGT
AACGAATACGATGTTTGGGATATAGGGGAGCTGGACGCCGAGGTTCTGGA
CAATGGGGTTCCAATTCAGTCAAATGCTGCACTGGATCAGGCGGCGACTT
TTGCAGCAGCAGCTCAACATCAGCCAAAGGCTGCTGCTGCTGCGACGGCA
GTGGGCGACGATGACTATGGGGATCTACTGGACCCCATGGAGGTCGAAGA
AGATGGCGCATCCCATTTCTCTGACTTACACAGAGCCTATGCTGAGCTGA
GTGAAAAGGTAGTTATGCGAAATTACCCTCCTTGAGTTCATCTGAACTGA
CTGTCTCGATAGCTGGCTTTAGAGAGCGCGCGACACAAACAAATGGCTGA
GGAGCTGGCTGCAGCCAAATCAATGGCTGCAACGAAAGCCGGCGAGATCT
CCATCATCCGAGCCAACCAGGCCAAACTCACCGCCGATTATGATCGCCAA
CTGACGGCTTTGCGAAAGGCGATGGCGGACGAGATAGCGAAACATGAGGA
AGAGGTTGCGGCGGCTCGTGCGGAGGGCAAGATGTTCGCCACGGAAAACG
CCTTTCTGAGGCAAGACCTAGCAGAGGAGGCCATGCGTGCCAATCAGCTC
AAGGCAAAAGGTCGAACGGAGGAAAAGGCACCACCGGTGACTCCAAAGAA
GTCGAAGGTGCTACCATTCCGCGACGGCTTTGACGATGATGAAATCCTCG
CTGTTTCTCCCAGCAAGTCAGCACGTTCCAAGCGAATCACACCACTCGTA
CCGGGGAAAAGGAAAAGAAGGCACAGTCAGGATACCACGACACCCTTGCA
GTTAAGCCCGCAAGCGGAGCCAATGGCAGCCGATTTGGCTGAAGATCTGT
CGGATAATGCAATGCTAGATGCTATGCCGGATAAAGCTCAAATAGGCGCG
GTGCCTAACTTTGGGGACCCCAGCATTATAAAGCGCCTTATGAACCACAG
AACATACCCGGATGAGAAGCCCGATATCGAGGTCATGGCTGGATTGGCAT
TCCCGTCAGAGCCACAGCGCATGCTCTCCACCATCCTCTTGGAGGAAACT
GAGAAGCTTGATCTTGGTAACTACATGGTGGAGTACGCGCGGGCGATCAC
ATCGTTGTGGTCTCGTGCATTGACAGAAAAGTTCTTTCAACCTATCCCGA
TGTTCATTTCCATCATGCACTACCTCATATTGGAGGACCTACAAGAATTC
GATCATGACTTGTACGCACACCTGGTGCCGGTTCTGCAAGTATCCGCGGA
AGTCAACGCAATCCCACGGTTCAAGGCCTCGCCCGTCTCCCGACAAAACC
TAGGTCAGGCGCGAAAGACACCCTTGTCCGAACTGGAACCGCTGGTCGAC
TCGACTAAAGTTCTTGGCCTGCTGTATGACATGGCATGCTTCCGGATGCA
CGTAGAACAGGATGTGATTGAGCTGTGGCGACATGTGCGCTACGACTTTG
TGCTGACGATGTTGAACTGCTCGCAGCGCATTGACGACATAACACTAATG
CTAAGCTTACTGTCGGCCAGCATCCGCGCCGACTCATTCGGCCCCGTCCA
AGACACTGAGCAATTTCAACTCACGATCGAGAACTACATCGTGGATCGCG
TCGCCAACCTGCTAAGCGAGCCACCGCTGCTTGATGAAGGACAGGAGCCT
TACAGCCCAGACGAGATCTGCGGCATGCGGCAAGAAGCATTAGCCTTCCT
TACTAGCGTCGCTTTCAATCCCCGTATACCGGACAGCACGCACGGCAGCA
TGGTCATCGCATCCCACCCCACTGCACTGGCGCGATTAATCCGGGTGATG
CACGATGAATTGGACGCTCTTTATTCACAACCGCCCGAGAAGGACCTCCA
CGCAGCCTTGGTCAACGGACTCATGTGTCTCGTCTACAACGTGATGCAGC
GCCATCGCGAACAGGCAGATCTGCAGCCCAAGCTGTCCCGCGTGCCTGGC
GGTAAGCAAAAGTTCCTGGTGGTAATGACACGATTAGCGTTCAGCGAGGG
ACTAGTGCTAGAGGCGGGAATCGACGACGGCACAGTTGAAATGGCCCATG
AAATCCTCGATGATGCCGTGACTCCGCAGGAAGCTGAGGCGCTGGAGGAG
GCGTTTCCGAATTCCAAGCGGGAGGATTAGAGCTGCTTCCTGGAGCTGGG
CCAGAGACGATCTGCTGATCTGATGAGTGTTAGCGAGTAATCTATGGTCG
GATATGGAAGGGTGGATGTCTGAATATTTATACAACGATACCAACGATAC
CTGAGTAATGATATACGATAGAATATGATAATGCAAAAGTCTCTAGTCGG
TTGACTATTT back to topCoding sequence (CDS) from alignment at ch4:2237287..2239996- >KJC3_005296-T1 ID=KJC3_005296-T1|Name=KJC3_005296-T1|organism=Aspergillus niger KJC3|type=CDS|length=4704bp|location=Sequence derived from alignment at ch4:2237287..2239996- (Aspergillus niger KJC3)
CTGGCTTTAGAGAGCGCGCGACACAAACAAATGGCTGAGGAGCTGGCTGC
AGCCAAATCAATGGCTGCAACGAAAGCCGGCGAGATCTCCATCATCCGAG
CCAACCAGGCCAAACTCACCGCCGATTATGATCGCCAACTGACGGCTTTG
CGAAAGGCGATGGCGGACGAGATAGCGAAACATGAGGAAGAGGTTGCGGC
GGCTCGTGCGGAGGGCAAGATGTTCGCCACGGAAAACGCCTTTCTGAGGC
AAGACCTAGCAGAGGAGGCCATGCGTGCCAATCAGCTCAAGGCAAAAGGT
CGAACGGAGGAAAAGGCACCACCGGTGACTCCAAAGAAGTCGAAGGTGCT
ACCATTCCGCGACGGCTTTGACGATGATGAAATCCTCGCTGTTTCTCCCA
GCAAGTCAGCACGTTCCAAGCGAATCACACCACTCGTACCGGGGAAAAGG
AAAAGAAGGCACAGTCAGGATACCACGACACCCTTGCAGTTAAGCCCGCA
AGCGGAGCCAATGGCAGCCGATTTGGCTGAAGATCTGTCGGATAATGCAA
TGCTAGATGCTATGCCGGATAAAGCTCAAATAGGCGCGGTGCCTAACTTT
GGGGACCCCAGCATTATAAAGCGCCTTATGAACCACAGAACATACCCGGA
TGAGAAGCCCGATATCGAGGTCATGGCTGGATTGGCATTCCCGTCAGAGC
CACAGCGCATGCTCTCCACCATCCTCTTGGAGGAAACTGAGAAGCTTGAT
CTTGGTAACTACATGGTGGAGTACGCGCGGGCGATCACATCGTTGTGGTC
TCGTGCATTGACAGAAAAGTTCTTTCAACCTATCCCGATGTTCATTTCCA
TCATGCACTACCTCATATTGGAGGACCTACAAGAATTCGATCATGACTTG
TACGCACACCTGGTGCCGGTTCTGCAAGTATCCGCGGAAGTCAACGCAAT
CCCACGGTTCAAGGCCTCGCCCGTCTCCCGACAAAACCTAGGTCAGGCGC
GAAAGACACCCTTGTCCGAACTGGAACCGCTGGTCGACTCGACTAAAGTT
CTTGGCCTGCTGTATGACATGGCATGCTTCCGGATGCACGTAGAACAGGA
TGTGATTGAGCTGTGGCGACATGTGCGCTACGACTTTGTGCTGACGATGT
TGAACTGCTCGCAGCGCATTGACGACATAACACTAATGCTAAGCTTACTG
TCGGCCAGCATCCGCGCCGACTCATTCGGCCCCGTCCAAGACACTGAGCA
ATTTCAACTCACGATCGAGAACTACATCGTGGATCGCGTCGCCAACCTGC
TAAGCGAGCCACCGCTGCTTGATGAAGGACAGGAGCCTTACAGCCCAGAC
GAGATCTGCGGCATGCGGCAAGAAGCATTAGCCTTCCTTACTAGCGTCGC
TTTCAATCCCCGTATACCGGACAGCACGCACGGCAGCATGGTCATCGCAT
CCCACCCCACTGCACTGGCGCGATTAATCCGGGTGATGCACGATGAATTG
GACGCTCTTTATTCACAACCGCCCGAGAAGGACCTCCACGCAGCCTTGGT
CAACGGACTCATGTGTCTCGTCTACAACGTGATGCAGCGCCATCGCGAAC
AGGCAGATCTGCAGCCCAAGCTGTCCCGCGTGCCTGGCGGTAAGCAAAAG
TTCCTGGTGGTAATGACACGATTAGCGTTCAGCGAGGGACTAGTGCTAGA
GGCGGGAATCGACGACGGCACAGTTGAAATGGCCCATGAAATCCTCGATG
ATGCCGTGACTCCGCAGGAAGCTGAGGCGCTGGAGGAGGCGTTTCCGAAT
TCCAAGCGGGAGGATTAGATGGAAGATAACGACGATGATTTCTTCTCCGA
CGATGGCTTCGACGACATCCCTCCCGGTACCTTGTTCCAATTGGAGCAGA
AGGCTTATCGCGCAACTCAGGCCCCAAACCCTGCCCAACAACATCACCAG
CCACAACAACACCAAGAGTCTGTCTCTGACGTAAAGAGATCGTCGCGACC
TTTTTCCGATCAGAACCATGGGGCTTTTTCCGAGAATGCATTCACCTCCA
ACGCTTCCCTACAACCGCCTCCTGCTTTGCATACCGGGTTGAGTAACGAA
TACGATGTTTGGGATATAGGGGAGCTGGACGCCGAGGTTCTGGACAATGG
GGTTCCAATTCAGTCAAATGCTGCACTGGATCAGGCGGCGACTTTTGCAG
CAGCAGCTCAACATCAGCCAAAGGCTGCTGCTGCTGCGACGGCAGTGGGC
GACGATGACTATGGGGATCTACTGGACCCCATGGAGGTCGAAGAAGATGG
CGCATCCCATTTCTCTGACTTACACAGAGCCTATGCTGAGCTGAGTGAAA
AGCTGGCTTTAGAGAGCGCGCGACACAAACAAATGGCTGAGGAGCTGGCT
GCAGCCAAATCAATGGCTGCAACGAAAGCCGGCGAGATCTCCATCATCCG
AGCCAACCAGGCCAAACTCACCGCCGATTATGATCGCCAACTGACGGCTT
TGCGAAAGGCGATGGCGGACGAGATAGCGAAACATGAGGAAGAGGTTGCG
GCGGCTCGTGCGGAGGGCAAGATGTTCGCCACGGAAAACGCCTTTCTGAG
GCAAGACCTAGCAGAGGAGGCCATGCGTGCCAATCAGCTCAAGGCAAAAG
GTCGAACGGAGGAAAAGGCACCACCGGTGACTCCAAAGAAGTCGAAGGTG
CTACCATTCCGCGACGGCTTTGACGATGATGAAATCCTCGCTGTTTCTCC
CAGCAAGTCAGCACGTTCCAAGCGAATCACACCACTCGTACCGGGGAAAA
GGAAAAGAAGGCACAGTCAGGATACCACGACACCCTTGCAGTTAAGCCCG
CAAGCGGAGCCAATGGCAGCCGATTTGGCTGAAGATCTGTCGGATAATGC
AATGCTAGATGCTATGCCGGATAAAGCTCAAATAGGCGCGGTGCCTAACT
TTGGGGACCCCAGCATTATAAAGCGCCTTATGAACCACAGAACATACCCG
GATGAGAAGCCCGATATCGAGGTCATGGCTGGATTGGCATTCCCGTCAGA
GCCACAGCGCATGCTCTCCACCATCCTCTTGGAGGAAACTGAGAAGCTTG
ATCTTGGTAACTACATGGTGGAGTACGCGCGGGCGATCACATCGTTGTGG
TCTCGTGCATTGACAGAAAAGTTCTTTCAACCTATCCCGATGTTCATTTC
CATCATGCACTACCTCATATTGGAGGACCTACAAGAATTCGATCATGACT
TGTACGCACACCTGGTGCCGGTTCTGCAAGTATCCGCGGAAGTCAACGCA
ATCCCACGGTTCAAGGCCTCGCCCGTCTCCCGACAAAACCTAGGTCAGGC
GCGAAAGACACCCTTGTCCGAACTGGAACCGCTGGTCGACTCGACTAAAG
TTCTTGGCCTGCTGTATGACATGGCATGCTTCCGGATGCACGTAGAACAG
GATGTGATTGAGCTGTGGCGACATGTGCGCTACGACTTTGTGCTGACGAT
GTTGAACTGCTCGCAGCGCATTGACGACATAACACTAATGCTAAGCTTAC
TGTCGGCCAGCATCCGCGCCGACTCATTCGGCCCCGTCCAAGACACTGAG
CAATTTCAACTCACGATCGAGAACTACATCGTGGATCGCGTCGCCAACCT
GCTAAGCGAGCCACCGCTGCTTGATGAAGGACAGGAGCCTTACAGCCCAG
ACGAGATCTGCGGCATGCGGCAAGAAGCATTAGCCTTCCTTACTAGCGTC
GCTTTCAATCCCCGTATACCGGACAGCACGCACGGCAGCATGGTCATCGC
ATCCCACCCCACTGCACTGGCGCGATTAATCCGGGTGATGCACGATGAAT
TGGACGCTCTTTATTCACAACCGCCCGAGAAGGACCTCCACGCAGCCTTG
GTCAACGGACTCATGTGTCTCGTCTACAACGTGATGCAGCGCCATCGCGA
ACAGGCAGATCTGCAGCCCAAGCTGTCCCGCGTGCCTGGCGGTAAGCAAA
AGTTCCTGGTGGTAATGACACGATTAGCGTTCAGCGAGGGACTAGTGCTA
GAGGCGGGAATCGACGACGGCACAGTTGAAATGGCCCATGAAATCCTCGA
TGATGCCGTGACTCCGCAGGAAGCTGAGGCGCTGGAGGAGGCGTTTCCGA
ATTCCAAGCGGGAGGATTAGATGGAAGATAACGACGATGATTTCTTCTCC
GACGATGGCTTCGACGACATCCCTCCCGGTACCTTGTTCCAATTGGAGCA
GAAGGCTTATCGCGCAACTCAGGCCCCAAACCCTGCCCAACAACATCACC
AGCCACAACAACACCAAGAGTCTGTCTCTGACGTAAAGAGATCGTCGCGA
CCTTTTTCCGATCAGAACCATGGGGCTTTTTCCGAGAATGCATTCACCTC
CAACGCTTCCCTACAACCGCCTCCTGCTTTGCATACCGGGTTGAGTAACG
AATACGATGTTTGGGATATAGGGGAGCTGGACGCCGAGGTTCTGGACAAT
GGGGTTCCAATTCAGTCAAATGCTGCACTGGATCAGGCGGCGACTTTTGC
AGCAGCAGCTCAACATCAGCCAAAGGCTGCTGCTGCTGCGACGGCAGTGG
GCGACGATGACTATGGGGATCTACTGGACCCCATGGAGGTCGAAGAAGAT
GGCGCATCCCATTTCTCTGACTTACACAGAGCCTATGCTGAGCTGAGTGA
AAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005296-T1.utr3p1 | KJC3_005296-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005296-T1.utr5p1 | KJC3_005296-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022093 |
| DBxref | PFAM:PF12331 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2237287..2239996 - |
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